RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 DNMT3AQ9Y6K1 912 aaPredicted RBP10.58□□□□□ -0.72
CRNDE-208ENST00000560029 GPR25O00155 361 aa10.57□□□□□ -0.72
CRNDE-208ENST00000560029 CELA2BP08218 269 aaPredicted RBP10.57□□□□□ -0.72
CRNDE-208ENST00000560029 TMEM132AQ24JP5 1023 aa10.57□□□□□ -0.72
CRNDE-208ENST00000560029 SRSF11Q05519 484 aaKnown RBP10.56□□□□□ -0.72
CRNDE-208ENST00000560029 USP17L8P0C7I0 530 aa10.55□□□□□ -0.72
CRNDE-208ENST00000560029 MAP3K10Q02779 954 aa10.55□□□□□ -0.72
CRNDE-208ENST00000560029 IL27Q8NEV9 243 aa10.55□□□□□ -0.72
CRNDE-208ENST00000560029 SCARF2Q96GP6 870 aaPredicted RBP10.55□□□□□ -0.72
CRNDE-208ENST00000560029 ESPNB1AK53 854 aa10.54□□□□□ -0.72
CRNDE-208ENST00000560029 KANK3Q6NY19 840 aa10.53□□□□□ -0.72
CRNDE-208ENST00000560029 RIPOR1Q6ZS17 1223 aa10.53□□□□□ -0.72
CRNDE-208ENST00000560029 MEN1O00255 615 aa10.52□□□□□ -0.73
CRNDE-208ENST00000560029 DBN1Q16643 649 aa10.52□□□□□ -0.73
CRNDE-208ENST00000560029 ZNF837Q96EG3 531 aaPredicted RBP10.52□□□□□ -0.73
CRNDE-208ENST00000560029 CNTNAP5Q8WYK1 1306 aa10.52□□□□□ -0.73
CRNDE-208ENST00000560029 RNF144AP50876 292 aaPredicted RBP10.51□□□□□ -0.73
CRNDE-208ENST00000560029 PNMA1Q8ND90 353 aa10.51□□□□□ -0.73
CRNDE-208ENST00000560029 GIGYF1O75420 1035 aaPredicted RBP10.5□□□□□ -0.73
CRNDE-208ENST00000560029 ATP5J2-PTCD1G3V325 749 aa10.49□□□□□ -0.73
CRNDE-208ENST00000560029 POU4F2Q12837 409 aa10.49□□□□□ -0.73
CRNDE-208ENST00000560029 TRIM22Q8IYM9 498 aa10.49□□□□□ -0.73
CRNDE-208ENST00000560029 DDRGK1Q96HY6 314 aa10.49□□□□□ -0.73
CRNDE-208ENST00000560029 GAS2L1Q99501 681 aaPredicted RBP10.49□□□□□ -0.73
CRNDE-208ENST00000560029 IGF1RP08069 1367 aa10.49□□□□□ -0.73
CRNDE-208ENST00000560029 IGHA1P01876 353 aa10.48□□□□□ -0.73
CRNDE-208ENST00000560029 RFC5P40937 340 aa10.48□□□□□ -0.73
CRNDE-208ENST00000560029 GTPBP3Q969Y2 492 aaKnown RBP10.48□□□□□ -0.73
CRNDE-208ENST00000560029 TRIM34Q9BYJ4 488 aa10.48□□□□□ -0.73
CRNDE-208ENST00000560029 PCDHB9Q9Y5E1 797 aa10.48□□□□□ -0.73
CRNDE-208ENST00000560029 A0A1W2PRU2 124 aa10.47□□□□□ -0.73
CRNDE-208ENST00000560029 ENAMQ9NRM1 1142 aa10.47□□□□□ -0.73
CRNDE-208ENST00000560029 MBIPQ9NS73 344 aa10.47□□□□□ -0.73
CRNDE-208ENST00000560029 FOXK2Q01167 660 aa10.45□□□□□ -0.74
CRNDE-208ENST00000560029 FOXR1Q6PIV2 292 aa10.45□□□□□ -0.74
CRNDE-208ENST00000560029 SEPT12Q8IYM1 358 aa10.45□□□□□ -0.74
CRNDE-208ENST00000560029 NEDD1Q8NHV4 660 aa10.45□□□□□ -0.74
CRNDE-208ENST00000560029 PLA2G4EQ3MJ16 856 aa10.44□□□□□ -0.74
CRNDE-208ENST00000560029 SLC27A3Q5K4L6 730 aa10.44□□□□□ -0.74
CRNDE-208ENST00000560029 ACDQ96AP0 544 aa10.44□□□□□ -0.74
CRNDE-208ENST00000560029 DCAF5Q96JK2 942 aa10.44□□□□□ -0.74
CRNDE-208ENST00000560029 BCRP11274 1271 aa10.43□□□□□ -0.74
CRNDE-208ENST00000560029 ZBBXA8MT70 800 aa10.42□□□□□ -0.74
CRNDE-208ENST00000560029 ITGB2P05107 769 aa10.42□□□□□ -0.74
CRNDE-208ENST00000560029 FBXO45P0C2W1 286 aa10.42□□□□□ -0.74
CRNDE-208ENST00000560029 NLRP3Q96P20 1036 aa10.42□□□□□ -0.74
CRNDE-208ENST00000560029 DYRK1BQ9Y463 629 aa10.42□□□□□ -0.74
CRNDE-208ENST00000560029 MSTNO14793 375 aa10.41□□□□□ -0.74
CRNDE-208ENST00000560029 SCTRP47872 440 aa10.41□□□□□ -0.74
CRNDE-208ENST00000560029 BEND7Q8N7W2 519 aaPredicted RBP10.4□□□□□ -0.74
CRNDE-208ENST00000560029 GMCL1Q96IK5 515 aa10.4□□□□□ -0.74
CRNDE-208ENST00000560029 SPOCK3Q9BQ16 436 aa10.4□□□□□ -0.74
CRNDE-208ENST00000560029 PHF20L1A8MW92 1017 aa10.39□□□□□ -0.75
CRNDE-208ENST00000560029 GPC1P35052 558 aa10.39□□□□□ -0.75
CRNDE-208ENST00000560029 ERVK-9P63128 1117 aa10.39□□□□□ -0.75
CRNDE-208ENST00000560029 CC2D2BQ6DHV5 1058 aa10.39□□□□□ -0.75
CRNDE-208ENST00000560029 NBPF10Q6P3W6 841 aaKnown RBP10.39□□□□□ -0.75
CRNDE-208ENST00000560029 NBPF15Q8N660 670 aa10.39□□□□□ -0.75
CRNDE-208ENST00000560029 GRIP2Q9C0E4 1043 aa10.39□□□□□ -0.75
CRNDE-208ENST00000560029 H7C1W4 665 aa10.38□□□□□ -0.75
CRNDE-208ENST00000560029 MX2P20592 715 aa10.38□□□□□ -0.75
CRNDE-208ENST00000560029 PODNQ7Z5L7 613 aa10.38□□□□□ -0.75
CRNDE-208ENST00000560029 TRERF1Q96PN7 1200 aa10.38□□□□□ -0.75
CRNDE-208ENST00000560029 GTF3C3Q9Y5Q9 886 aa10.38□□□□□ -0.75
CRNDE-208ENST00000560029 ARHGEF10LQ9HCE6 1279 aa10.37□□□□□ -0.75
CRNDE-208ENST00000560029 TIMMDC1Q9NPL8 285 aa10.37□□□□□ -0.75
CRNDE-208ENST00000560029 RAB6BQ9NRW1 208 aa10.37□□□□□ -0.75
CRNDE-208ENST00000560029 GJD4Q96KN9 370 aaPredicted RBP10.36□□□□□ -0.75
CRNDE-208ENST00000560029 NUCKS1Q9H1E3 243 aaKnown RBP10.36□□□□□ -0.75
CRNDE-208ENST00000560029 CLN3Q13286 438 aa10.35□□□□□ -0.75
CRNDE-208ENST00000560029 PCDHB11Q9Y5F2 797 aa10.35□□□□□ -0.75
CRNDE-208ENST00000560029 ADAM23O75077 832 aa10.34□□□□□ -0.75
CRNDE-208ENST00000560029 PHKA2P46019 1235 aa10.34□□□□□ -0.75
CRNDE-208ENST00000560029 SNRPNP63162 240 aaKnown RBP10.34□□□□□ -0.75
CRNDE-208ENST00000560029 TRIM52Q96A61 297 aa10.34□□□□□ -0.75
CRNDE-208ENST00000560029 OSBPL3Q9H4L5 887 aa10.34□□□□□ -0.75
CRNDE-208ENST00000560029 GPAMQ9HCL2 828 aa10.34□□□□□ -0.75
CRNDE-208ENST00000560029 F11P03951 625 aa10.33□□□□□ -0.76
CRNDE-208ENST00000560029 THBS1P07996 1170 aa10.33□□□□□ -0.76
CRNDE-208ENST00000560029 TMEM259Q4ZIN3 620 aa10.33□□□□□ -0.76
CRNDE-208ENST00000560029 CYP2U1Q7Z449 544 aa10.33□□□□□ -0.76
CRNDE-208ENST00000560029 WASLO00401 505 aaPredicted RBP10.32□□□□□ -0.76
CRNDE-208ENST00000560029 PROCP04070 461 aa10.32□□□□□ -0.76
CRNDE-208ENST00000560029 XP32Q5T750 250 aa10.32□□□□□ -0.76
CRNDE-208ENST00000560029 TAS1R3Q7RTX0 852 aa10.32□□□□□ -0.76
CRNDE-208ENST00000560029 PCMTD1Q96MG8 357 aaPredicted RBP10.32□□□□□ -0.76
CRNDE-208ENST00000560029 SPATA31C2B4DYI2 1134 aa10.31□□□□□ -0.76
CRNDE-208ENST00000560029 OIP5O43482 229 aa10.31□□□□□ -0.76
CRNDE-208ENST00000560029 RNF20Q5VTR2 975 aa10.31□□□□□ -0.76
CRNDE-208ENST00000560029 GALNT6Q8NCL4 622 aa10.31□□□□□ -0.76
CRNDE-208ENST00000560029 ESF1Q9H501 851 aaKnown RBP10.31□□□□□ -0.76
CRNDE-208ENST00000560029 NSFL1CQ9UNZ2 370 aaKnown RBP10.31□□□□□ -0.76
CRNDE-208ENST00000560029 SHISA8B8ZZ34 492 aa10.3□□□□□ -0.76
CRNDE-208ENST00000560029 TRAK2O60296 914 aa10.3□□□□□ -0.76
CRNDE-208ENST00000560029 C1orf229Q6ZS94 237 aaPredicted RBP10.3□□□□□ -0.76
CRNDE-208ENST00000560029 OXCT2Q9BYC2 517 aaPredicted RBP10.3□□□□□ -0.76
CRNDE-208ENST00000560029 GOPCQ9HD26 462 aa10.29□□□□□ -0.76
CRNDE-208ENST00000560029 IL2RAP01589 272 aa10.28□□□□□ -0.76
CRNDE-208ENST00000560029 CENPCQ03188 943 aa10.28□□□□□ -0.76
CRNDE-208ENST00000560029 NR1H3Q13133 447 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms