RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ADAMTS8Q9UP79 889 aa19.79■□□□□ 0.76
SNRPA1-207ENST00000559309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.78■□□□□ 0.76
SNRPA1-207ENST00000559309 U2SURPO15042 1029 aaKnown RBP19.77■□□□□ 0.76
SNRPA1-207ENST00000559309 U2AF1L5P0DN76 240 aaPredicted RBP19.77■□□□□ 0.76
SNRPA1-207ENST00000559309 IL2RBP14784 551 aa19.77■□□□□ 0.76
SNRPA1-207ENST00000559309 U2AF1Q01081 240 aaKnown RBP eCLIP19.77■□□□□ 0.76
SNRPA1-207ENST00000559309 TNS2Q63HR2 1409 aa19.76■□□□□ 0.75
SNRPA1-207ENST00000559309 ADAMTS7Q9UKP4 1686 aa19.76■□□□□ 0.75
SNRPA1-207ENST00000559309 HMOX1P09601 288 aa19.76■□□□□ 0.75
SNRPA1-207ENST00000559309 BRWD3Q6RI45 1802 aa19.74■□□□□ 0.75
SNRPA1-207ENST00000559309 PRKAR2BP31323 418 aa19.73■□□□□ 0.75
SNRPA1-207ENST00000559309 WDR43Q15061 677 aaKnown RBP eCLIP19.73■□□□□ 0.75
SNRPA1-207ENST00000559309 FAM98CQ17RN3 349 aaKnown RBP19.73■□□□□ 0.75
SNRPA1-207ENST00000559309 PHACTR3Q96KR7 559 aa19.73■□□□□ 0.75
SNRPA1-207ENST00000559309 USP35Q9P2H5 1018 aa19.73■□□□□ 0.75
SNRPA1-207ENST00000559309 RAPGEF4Q8WZA2 1011 aa19.72■□□□□ 0.75
SNRPA1-207ENST00000559309 BCL9O00512 1426 aa19.71■□□□□ 0.75
SNRPA1-207ENST00000559309 TATP17735 454 aaPredicted RBP19.71■□□□□ 0.75
SNRPA1-207ENST00000559309 CCDC9Q9Y3X0 531 aaKnown RBP19.71■□□□□ 0.75
SNRPA1-207ENST00000559309 AMOTQ4VCS5 1084 aa19.7■□□□□ 0.74
SNRPA1-207ENST00000559309 NCBP3Q53F19 620 aaKnown RBP19.7■□□□□ 0.74
SNRPA1-207ENST00000559309 CCDC125Q86Z20 511 aa19.7■□□□□ 0.74
SNRPA1-207ENST00000559309 DLG5Q8TDM6 1919 aa19.7■□□□□ 0.74
SNRPA1-207ENST00000559309 RUNDC1Q96C34 613 aa19.69■□□□□ 0.74
SNRPA1-207ENST00000559309 PNNQ9H307 717 aaKnown RBP19.69■□□□□ 0.74
SNRPA1-207ENST00000559309 CYP27B1O15528 508 aa19.68■□□□□ 0.74
SNRPA1-207ENST00000559309 MTHFSDQ2M296 383 aaKnown RBP19.68■□□□□ 0.74
SNRPA1-207ENST00000559309 SEPT12Q8IYM1 358 aa19.68■□□□□ 0.74
SNRPA1-207ENST00000559309 ZCRB1Q8TBF4 217 aaKnown RBP19.68■□□□□ 0.74
SNRPA1-207ENST00000559309 NKX1-1Q15270 411 aaPredicted RBP19.67■□□□□ 0.74
SNRPA1-207ENST00000559309 TOGARAM1Q9Y4F4 1720 aa19.66■□□□□ 0.74
SNRPA1-207ENST00000559309 DDB1Q16531 1140 aa19.66■□□□□ 0.74
SNRPA1-207ENST00000559309 PLEKHO1Q53GL0 409 aaPredicted RBP19.66■□□□□ 0.74
SNRPA1-207ENST00000559309 VIRMAQ69YN4 1812 aaKnown RBP19.66■□□□□ 0.74
SNRPA1-207ENST00000559309 SCN11AQ9UI33 1791 aa19.65■□□□□ 0.74
SNRPA1-207ENST00000559309 EXOC5O00471 708 aa19.65■□□□□ 0.74
SNRPA1-207ENST00000559309 FAM9BQ8IZU0 186 aa19.65■□□□□ 0.74
SNRPA1-207ENST00000559309 SPG7Q9UQ90 795 aa19.65■□□□□ 0.74
SNRPA1-207ENST00000559309 PCDH11XQ9BZA7 1347 aa19.65■□□□□ 0.74
SNRPA1-207ENST00000559309 PCDH11YQ9BZA8 1340 aa19.65■□□□□ 0.74
SNRPA1-207ENST00000559309 PHKG2P15735 406 aa19.64■□□□□ 0.73
SNRPA1-207ENST00000559309 MARCH10Q8NA82 808 aaPredicted RBP19.64■□□□□ 0.73
SNRPA1-207ENST00000559309 NFE2L2Q16236 605 aa19.63■□□□□ 0.73
SNRPA1-207ENST00000559309 CCDC146Q8IYE0 955 aa19.63■□□□□ 0.73
SNRPA1-207ENST00000559309 GAS2L2Q8NHY3 880 aa19.63■□□□□ 0.73
SNRPA1-207ENST00000559309 SBF2Q86WG5 1849 aa19.62■□□□□ 0.73
SNRPA1-207ENST00000559309 MRC1P22897 1456 aa19.62■□□□□ 0.73
SNRPA1-207ENST00000559309 KDM6AO15550 1401 aaPredicted RBP19.62■□□□□ 0.73
SNRPA1-207ENST00000559309 CEMIPQ8WUJ3 1361 aa19.62■□□□□ 0.73
SNRPA1-207ENST00000559309 TMPOP42166 694 aaKnown RBP19.62■□□□□ 0.73
SNRPA1-207ENST00000559309 AKAP4Q5JQC9 854 aa19.62■□□□□ 0.73
SNRPA1-207ENST00000559309 SIPA1L3O60292 1781 aaPredicted RBP19.62■□□□□ 0.73
SNRPA1-207ENST00000559309 HTATSF1O43719 755 aaKnown RBP19.61■□□□□ 0.73
SNRPA1-207ENST00000559309 IFNL2Q8IZJ0 200 aa19.61■□□□□ 0.73
SNRPA1-207ENST00000559309 MAP3K5Q99683 1374 aa19.6■□□□□ 0.73
SNRPA1-207ENST00000559309 CCDC27Q2M243 656 aa19.6■□□□□ 0.73
SNRPA1-207ENST00000559309 ZNF530Q6P9A1 599 aaPredicted RBP19.6■□□□□ 0.73
SNRPA1-207ENST00000559309 MAPK8IP3Q9UPT6 1336 aa19.59■□□□□ 0.73
SNRPA1-207ENST00000559309 APAF1O14727 1248 aa19.59■□□□□ 0.73
SNRPA1-207ENST00000559309 TRIM35Q9UPQ4 493 aa19.59■□□□□ 0.73
SNRPA1-207ENST00000559309 DOT1LQ8TEK3 1739 aa19.59■□□□□ 0.73
SNRPA1-207ENST00000559309 KRT27Q7Z3Y8 459 aa19.58■□□□□ 0.72
SNRPA1-207ENST00000559309 NGEFQ8N5V2 710 aa19.58■□□□□ 0.72
SNRPA1-207ENST00000559309 NHSQ6T4R5 1651 aa19.58■□□□□ 0.72
SNRPA1-207ENST00000559309 ITGB4P16144 1822 aa19.58■□□□□ 0.72
SNRPA1-207ENST00000559309 ZNF521Q96K83 1311 aa19.57■□□□□ 0.72
SNRPA1-207ENST00000559309 GNAT3A8MTJ3 354 aa19.57■□□□□ 0.72
SNRPA1-207ENST00000559309 HSP90AB1P08238 724 aaKnown RBP19.56■□□□□ 0.72
SNRPA1-207ENST00000559309 IL17REQ8NFR9 667 aa19.56■□□□□ 0.72
SNRPA1-207ENST00000559309 DCAF5Q96JK2 942 aa19.56■□□□□ 0.72
SNRPA1-207ENST00000559309 PDE3BQ13370 1112 aa19.55■□□□□ 0.72
SNRPA1-207ENST00000559309 DDX54Q8TDD1 881 aaKnown RBP19.55■□□□□ 0.72
SNRPA1-207ENST00000559309 NEFMP07197 916 aa19.54■□□□□ 0.72
SNRPA1-207ENST00000559309 RIPK4P57078 832 aa19.54■□□□□ 0.72
SNRPA1-207ENST00000559309 PAPPAQ13219 1627 aa19.54■□□□□ 0.72
SNRPA1-207ENST00000559309 RNMTO43148 476 aaKnown RBP19.53■□□□□ 0.72
SNRPA1-207ENST00000559309 C1orf141Q5JVX7 400 aa19.53■□□□□ 0.72
SNRPA1-207ENST00000559309 LGR6Q9HBX8 967 aa19.53■□□□□ 0.72
SNRPA1-207ENST00000559309 ERVV-2B6SEH9 535 aa19.52■□□□□ 0.72
SNRPA1-207ENST00000559309 MPRIPQ6WCQ1 1025 aa19.52■□□□□ 0.72
SNRPA1-207ENST00000559309 RRP7AQ9Y3A4 280 aaKnown RBP19.52■□□□□ 0.72
SNRPA1-207ENST00000559309 FAM196AQ6ZSG2 479 aa19.51■□□□□ 0.71
SNRPA1-207ENST00000559309 TNS1Q9HBL0 1735 aaKnown RBP19.51■□□□□ 0.71
SNRPA1-207ENST00000559309 A0A0G2JS52 829 aa19.5■□□□□ 0.71
SNRPA1-207ENST00000559309 MYT1Q01538 1121 aa19.5■□□□□ 0.71
SNRPA1-207ENST00000559309 LMOD3Q0VAK6 560 aa19.5■□□□□ 0.71
SNRPA1-207ENST00000559309 WWC1Q8IX03 1113 aa19.5■□□□□ 0.71
SNRPA1-207ENST00000559309 KDM3BQ7LBC6 1761 aa19.49■□□□□ 0.71
SNRPA1-207ENST00000559309 FAM182BQ5T319 152 aa19.49■□□□□ 0.71
SNRPA1-207ENST00000559309 UBR2Q8IWV8 1755 aa19.49■□□□□ 0.71
SNRPA1-207ENST00000559309 DCTN1Q14203 1278 aa19.48■□□□□ 0.71
SNRPA1-207ENST00000559309 MCM10Q7L590 875 aa19.48■□□□□ 0.71
SNRPA1-207ENST00000559309 SLC52A2Q9HAB3 445 aa19.48■□□□□ 0.71
SNRPA1-207ENST00000559309 BTAF1O14981 1849 aa19.48■□□□□ 0.71
SNRPA1-207ENST00000559309 ZNF853P0CG23 659 aa19.47■□□□□ 0.71
SNRPA1-207ENST00000559309 DEFB132Q7Z7B7 95 aa19.47■□□□□ 0.71
SNRPA1-207ENST00000559309 CICQ96RK0 1608 aaPredicted RBP19.47■□□□□ 0.71
SNRPA1-207ENST00000559309 RGPD3A6NKT7 1758 aaPredicted RBP19.46■□□□□ 0.71
SNRPA1-207ENST00000559309 RGPD4Q7Z3J3 1758 aa19.46■□□□□ 0.71
SNRPA1-207ENST00000559309 IL16Q14005 1332 aa19.46■□□□□ 0.71
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