RNA–Protein interactions for RNA: ENST00000559289.1

SHC4-206, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-206ENST00000559289 ABCB7O75027 752 aa7.96□□□□□ -1.14
SHC4-206ENST00000559289 ZNF772Q68DY9 489 aaPredicted RBP7.96□□□□□ -1.14
SHC4-206ENST00000559289 PNISRQ8TF01 805 aaKnown RBP7.96□□□□□ -1.14
SHC4-206ENST00000559289 GJD4Q96KN9 370 aaPredicted RBP7.96□□□□□ -1.14
SHC4-206ENST00000559289 RTN4Q9NQC3 1192 aaKnown RBP7.96□□□□□ -1.14
SHC4-206ENST00000559289 USP35Q9P2H5 1018 aa7.96□□□□□ -1.14
SHC4-206ENST00000559289 U2SURPO15042 1029 aaKnown RBP7.95□□□□□ -1.14
SHC4-206ENST00000559289 ONECUT3O60422 494 aaPredicted RBP7.95□□□□□ -1.14
SHC4-206ENST00000559289 HMOX1P09601 288 aa7.95□□□□□ -1.14
SHC4-206ENST00000559289 SULT6B1Q6IMI4 303 aa7.95□□□□□ -1.14
SHC4-206ENST00000559289 BARGINQ6ZT62 677 aa7.95□□□□□ -1.14
SHC4-206ENST00000559289 TCP11L2Q8N4U5 519 aa7.95□□□□□ -1.14
SHC4-206ENST00000559289 RSPH6AQ9H0K4 717 aa7.95□□□□□ -1.14
SHC4-206ENST00000559289 MRS2Q9HD23 443 aa7.95□□□□□ -1.14
SHC4-206ENST00000559289 THRAP3Q9Y2W1 955 aaKnown RBP7.95□□□□□ -1.14
SHC4-206ENST00000559289 OVOS2A0A0G2JMS6 1433 aa7.95□□□□□ -1.14
SHC4-206ENST00000559289 DLG5Q8TDM6 1919 aa7.94□□□□□ -1.14
SHC4-206ENST00000559289 U2AF1L5P0DN76 240 aaPredicted RBP7.94□□□□□ -1.14
SHC4-206ENST00000559289 U2AF1Q01081 240 aaKnown RBP eCLIP7.94□□□□□ -1.14
SHC4-206ENST00000559289 FAM98CQ17RN3 349 aaKnown RBP7.94□□□□□ -1.14
SHC4-206ENST00000559289 PLEKHF1Q96S99 279 aa7.94□□□□□ -1.14
SHC4-206ENST00000559289 ADAMTS8Q9UP79 889 aa7.94□□□□□ -1.14
SHC4-206ENST00000559289 CCDC9Q9Y3X0 531 aaKnown RBP7.94□□□□□ -1.14
SHC4-206ENST00000559289 VIRMAQ69YN4 1812 aaKnown RBP7.94□□□□□ -1.14
SHC4-206ENST00000559289 IL2RBP14784 551 aa7.93□□□□□ -1.14
SHC4-206ENST00000559289 RBM6P78332 1123 aaKnown RBP7.93□□□□□ -1.14
SHC4-206ENST00000559289 NUDCQ9Y266 331 aa7.93□□□□□ -1.14
SHC4-206ENST00000559289 RGS12O14924 1447 aa7.93□□□□□ -1.14
SHC4-206ENST00000559289 TNS2Q63HR2 1409 aa7.93□□□□□ -1.14
SHC4-206ENST00000559289 FCHSD2O94868 740 aa7.92□□□□□ -1.14
SHC4-206ENST00000559289 PRKAR2BP31323 418 aa7.92□□□□□ -1.14
SHC4-206ENST00000559289 PHACTR3Q96KR7 559 aa7.92□□□□□ -1.14
SHC4-206ENST00000559289 ZNF219Q9P2Y4 722 aaPredicted RBP7.92□□□□□ -1.14
SHC4-206ENST00000559289 PLEKHG2Q9H7P9 1386 aa7.92□□□□□ -1.14
SHC4-206ENST00000559289 ADAMTS7Q9UKP4 1686 aa7.92□□□□□ -1.14
SHC4-206ENST00000559289 TOGARAM1Q9Y4F4 1720 aa7.92□□□□□ -1.14
SHC4-206ENST00000559289 TATP17735 454 aaPredicted RBP7.91□□□□□ -1.14
SHC4-206ENST00000559289 RXRBP28702 533 aa7.91□□□□□ -1.14
SHC4-206ENST00000559289 WDR43Q15061 677 aaKnown RBP eCLIP7.91□□□□□ -1.14
SHC4-206ENST00000559289 SEPT12Q8IYM1 358 aa7.91□□□□□ -1.14
SHC4-206ENST00000559289 SBF2Q86WG5 1849 aa7.9□□□□□ -1.14
SHC4-206ENST00000559289 SCN11AQ9UI33 1791 aa7.9□□□□□ -1.14
SHC4-206ENST00000559289 CYP27B1O15528 508 aa7.9□□□□□ -1.14
SHC4-206ENST00000559289 MTHFSDQ2M296 383 aaKnown RBP7.9□□□□□ -1.14
SHC4-206ENST00000559289 CCDC146Q8IYE0 955 aa7.9□□□□□ -1.14
SHC4-206ENST00000559289 FAM9BQ8IZU0 186 aa7.9□□□□□ -1.14
SHC4-206ENST00000559289 RAPGEF4Q8WZA2 1011 aa7.9□□□□□ -1.14
SHC4-206ENST00000559289 CDCA7Q9BWT1 371 aaPredicted RBP7.9□□□□□ -1.14
SHC4-206ENST00000559289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.9□□□□□ -1.14
SHC4-206ENST00000559289 DOT1LQ8TEK3 1739 aa7.89□□□□□ -1.15
SHC4-206ENST00000559289 MARCH10Q8NA82 808 aaPredicted RBP7.89□□□□□ -1.15
SHC4-206ENST00000559289 ZCRB1Q8TBF4 217 aaKnown RBP7.89□□□□□ -1.15
SHC4-206ENST00000559289 RUNDC1Q96C34 613 aa7.89□□□□□ -1.15
SHC4-206ENST00000559289 KDM6AO15550 1401 aaPredicted RBP7.88□□□□□ -1.15
SHC4-206ENST00000559289 ITGB4P16144 1822 aa7.88□□□□□ -1.15
SHC4-206ENST00000559289 EXOC5O00471 708 aa7.88□□□□□ -1.15
SHC4-206ENST00000559289 KCNA4P22459 653 aa7.88□□□□□ -1.15
SHC4-206ENST00000559289 DDB1Q16531 1140 aa7.88□□□□□ -1.15
SHC4-206ENST00000559289 PLEKHO1Q53GL0 409 aaPredicted RBP7.88□□□□□ -1.15
SHC4-206ENST00000559289 SIPA1L3O60292 1781 aaPredicted RBP7.88□□□□□ -1.15
SHC4-206ENST00000559289 PCDH11XQ9BZA7 1347 aa7.87□□□□□ -1.15
SHC4-206ENST00000559289 PCDH11YQ9BZA8 1340 aa7.87□□□□□ -1.15
SHC4-206ENST00000559289 EP400Q96L91 3159 aa7.87□□□□□ -1.15
SHC4-206ENST00000559289 SENP3-EIF4A1A0A087X0R7 540 aa7.87□□□□□ -1.15
SHC4-206ENST00000559289 PHKG2P15735 406 aa7.87□□□□□ -1.15
SHC4-206ENST00000559289 TMPOP42166 694 aaKnown RBP7.87□□□□□ -1.15
SHC4-206ENST00000559289 NKX1-1Q15270 411 aaPredicted RBP7.87□□□□□ -1.15
SHC4-206ENST00000559289 NFE2L2Q16236 605 aa7.87□□□□□ -1.15
SHC4-206ENST00000559289 AMOTQ4VCS5 1084 aa7.87□□□□□ -1.15
SHC4-206ENST00000559289 FAM182BQ5T319 152 aa7.87□□□□□ -1.15
SHC4-206ENST00000559289 ZNF530Q6P9A1 599 aaPredicted RBP7.87□□□□□ -1.15
SHC4-206ENST00000559289 SPG7Q9UQ90 795 aa7.87□□□□□ -1.15
SHC4-206ENST00000559289 BCL9O00512 1426 aa7.86□□□□□ -1.15
SHC4-206ENST00000559289 NHSQ6T4R5 1651 aa7.86□□□□□ -1.15
SHC4-206ENST00000559289 A0A0G2JS52 829 aa7.86□□□□□ -1.15
SHC4-206ENST00000559289 APAF1O14727 1248 aa7.86□□□□□ -1.15
SHC4-206ENST00000559289 MYT1Q01538 1121 aa7.86□□□□□ -1.15
SHC4-206ENST00000559289 AKAP4Q5JQC9 854 aa7.86□□□□□ -1.15
SHC4-206ENST00000559289 KRT27Q7Z3Y8 459 aa7.86□□□□□ -1.15
SHC4-206ENST00000559289 IFNL2Q8IZJ0 200 aa7.86□□□□□ -1.15
SHC4-206ENST00000559289 GAS2L2Q8NHY3 880 aa7.86□□□□□ -1.15
SHC4-206ENST00000559289 DDX54Q8TDD1 881 aaKnown RBP7.86□□□□□ -1.15
SHC4-206ENST00000559289 PNNQ9H307 717 aaKnown RBP7.86□□□□□ -1.15
SHC4-206ENST00000559289 LGR6Q9HBX8 967 aa7.86□□□□□ -1.15
SHC4-206ENST00000559289 TRIM35Q9UPQ4 493 aa7.86□□□□□ -1.15
SHC4-206ENST00000559289 RRP7AQ9Y3A4 280 aaKnown RBP7.86□□□□□ -1.15
SHC4-206ENST00000559289 MRC1P22897 1456 aa7.86□□□□□ -1.15
SHC4-206ENST00000559289 TNS1Q9HBL0 1735 aaKnown RBP7.86□□□□□ -1.15
SHC4-206ENST00000559289 CEMIPQ8WUJ3 1361 aa7.85□□□□□ -1.15
SHC4-206ENST00000559289 MAP3K5Q99683 1374 aa7.85□□□□□ -1.15
SHC4-206ENST00000559289 MAPK8IP3Q9UPT6 1336 aa7.85□□□□□ -1.15
SHC4-206ENST00000559289 HAX1O00165 279 aa7.85□□□□□ -1.15
SHC4-206ENST00000559289 PDE3BQ13370 1112 aa7.85□□□□□ -1.15
SHC4-206ENST00000559289 ILDR2Q71H61 639 aa7.85□□□□□ -1.15
SHC4-206ENST00000559289 IL17REQ8NFR9 667 aa7.85□□□□□ -1.15
SHC4-206ENST00000559289 PAPPAQ13219 1627 aa7.85□□□□□ -1.15
SHC4-206ENST00000559289 RNMTO43148 476 aaKnown RBP7.84□□□□□ -1.15
SHC4-206ENST00000559289 RIPK4P57078 832 aa7.84□□□□□ -1.15
SHC4-206ENST00000559289 DCTN1Q14203 1278 aa7.84□□□□□ -1.15
SHC4-206ENST00000559289 MPRIPQ6WCQ1 1025 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms