RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 MKRN1Q9UHC7 482 aaKnown RBP3.78□□□□□ -1.8
GABPB1-209ENST00000559100 RBM19Q9Y4C8 960 aaKnown RBP3.78□□□□□ -1.8
GABPB1-209ENST00000559100 USP17L15C9J2P7 530 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 USP17L10C9JJH3 530 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 USP17L13C9JLJ4 530 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 USP17L12C9JPN9 530 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 USP17L11C9JVI0 530 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 USP17L21D6R901 530 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 USP17L18D6R9N7 530 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 USP17L22D6RA61 530 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 USP17L17D6RBQ6 530 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 USP17L19D6RCP7 530 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 USP17L20D6RJB6 530 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 CCNYL3P0C7X3 344 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 APLP1P51693 650 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 USP17L24Q0WX57 530 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 NCOA4Q13772 614 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 ELOAQ14241 798 aaKnown RBP3.77□□□□□ -1.81
GABPB1-209ENST00000559100 NBPF14Q5TI25 921 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 ZBTB33Q86T24 672 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 CCDC24Q8N4L8 307 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 ZNF594Q96JF6 807 aaPredicted RBP3.77□□□□□ -1.81
GABPB1-209ENST00000559100 PKD2L1Q9P0L9 805 aa3.77□□□□□ -1.81
GABPB1-209ENST00000559100 FAM196BA6NMK8 535 aa3.76□□□□□ -1.81
GABPB1-209ENST00000559100 ATP5J2-PTCD1G3V325 749 aa3.76□□□□□ -1.81
GABPB1-209ENST00000559100 F12P00748 615 aaPredicted RBP3.76□□□□□ -1.81
GABPB1-209ENST00000559100 COPS2P61201 443 aa3.76□□□□□ -1.81
GABPB1-209ENST00000559100 AGERQ15109 404 aa3.76□□□□□ -1.81
GABPB1-209ENST00000559100 EML3Q32P44 896 aa3.76□□□□□ -1.81
GABPB1-209ENST00000559100 PLA2G4EQ3MJ16 856 aa3.76□□□□□ -1.81
GABPB1-209ENST00000559100 CRTC2Q53ET0 693 aaPredicted RBP3.76□□□□□ -1.81
GABPB1-209ENST00000559100 PLEKHM2Q8IWE5 1019 aa3.76□□□□□ -1.81
GABPB1-209ENST00000559100 PLPP7Q8NBV4 271 aa3.76□□□□□ -1.81
GABPB1-209ENST00000559100 FAM174AQ8TBP5 190 aa3.76□□□□□ -1.81
GABPB1-209ENST00000559100 NUDT12Q9BQG2 462 aa3.76□□□□□ -1.81
GABPB1-209ENST00000559100 ARHGAP9Q9BRR9 750 aa3.76□□□□□ -1.81
GABPB1-209ENST00000559100 CARD14Q9BXL6 1004 aa3.76□□□□□ -1.81
GABPB1-209ENST00000559100 CEP126Q9P2H0 1117 aa3.76□□□□□ -1.81
GABPB1-209ENST00000559100 ZMIZ1Q9ULJ6 1067 aa3.76□□□□□ -1.81
GABPB1-209ENST00000559100 GNEQ9Y223 722 aaKnown RBP3.76□□□□□ -1.81
GABPB1-209ENST00000559100 MAGEB6P1A0A0J9YX57 407 aa3.75□□□□□ -1.81
GABPB1-209ENST00000559100 ARID4AP29374 1257 aaPredicted RBP3.75□□□□□ -1.81
GABPB1-209ENST00000559100 MCCD1P59942 119 aaPredicted RBP3.75□□□□□ -1.81
GABPB1-209ENST00000559100 PSME1Q06323 249 aa3.75□□□□□ -1.81
GABPB1-209ENST00000559100 KCNH2Q12809 1159 aa3.75□□□□□ -1.81
GABPB1-209ENST00000559100 PDXDC2PQ6P474 469 aa3.75□□□□□ -1.81
GABPB1-209ENST00000559100 TRIM50Q86XT4 487 aa3.75□□□□□ -1.81
GABPB1-209ENST00000559100 DZIP3Q86Y13 1208 aaKnown RBP3.75□□□□□ -1.81
GABPB1-209ENST00000559100 SPSB2Q99619 263 aa3.75□□□□□ -1.81
GABPB1-209ENST00000559100 TOR4AQ9NXH8 423 aa3.75□□□□□ -1.81
GABPB1-209ENST00000559100 BIN2Q9UBW5 565 aaPredicted RBP3.75□□□□□ -1.81
GABPB1-209ENST00000559100 SALL2Q9Y467 1007 aaPredicted RBP3.75□□□□□ -1.81
GABPB1-209ENST00000559100 GPSM3Q9Y4H4 160 aa3.75□□□□□ -1.81
GABPB1-209ENST00000559100 LZTS3O60299 673 aaPredicted RBP3.74□□□□□ -1.81
GABPB1-209ENST00000559100 PROCP04070 461 aa3.74□□□□□ -1.81
GABPB1-209ENST00000559100 SLURP2P0DP57 97 aa3.74□□□□□ -1.81
GABPB1-209ENST00000559100 ATP2B4P23634 1241 aa3.74□□□□□ -1.81
GABPB1-209ENST00000559100 ATP1A2P50993 1020 aa3.74□□□□□ -1.81
GABPB1-209ENST00000559100 DPYDQ12882 1025 aa3.74□□□□□ -1.81
GABPB1-209ENST00000559100 OXLD1Q5BKU9 147 aa3.74□□□□□ -1.81
GABPB1-209ENST00000559100 ANKMY2Q8IV38 441 aa3.74□□□□□ -1.81
GABPB1-209ENST00000559100 OGFOD1Q8N543 542 aa3.74□□□□□ -1.81
GABPB1-209ENST00000559100 ADAM32Q8TC27 787 aa3.74□□□□□ -1.81
GABPB1-209ENST00000559100 GPKOWQ92917 476 aaPredicted RBP eCLIP3.74□□□□□ -1.81
GABPB1-209ENST00000559100 THAP11Q96EK4 314 aa3.74□□□□□ -1.81
GABPB1-209ENST00000559100 CDCA7Q9BWT1 371 aaPredicted RBP3.74□□□□□ -1.81
GABPB1-209ENST00000559100 PRDM9Q9NQV7 894 aa3.74□□□□□ -1.81
GABPB1-209ENST00000559100 EVA1BQ9NVM1 165 aa3.74□□□□□ -1.81
GABPB1-209ENST00000559100 DNAAF2Q9NVR5 837 aaKnown RBP3.74□□□□□ -1.81
GABPB1-209ENST00000559100 DOLKQ9UPQ8 538 aa3.74□□□□□ -1.81
GABPB1-209ENST00000559100 NOD1Q9Y239 953 aa3.74□□□□□ -1.81
GABPB1-209ENST00000559100 DXOO77932 396 aaKnown RBP3.73□□□□□ -1.81
GABPB1-209ENST00000559100 ABL1P00519 1130 aa3.73□□□□□ -1.81
GABPB1-209ENST00000559100 PTK7Q13308 1070 aa3.73□□□□□ -1.81
GABPB1-209ENST00000559100 MAP7D1Q3KQU3 841 aa3.73□□□□□ -1.81
GABPB1-209ENST00000559100 MSS51Q4VC12 460 aa3.73□□□□□ -1.81
GABPB1-209ENST00000559100 CYP4X1Q8N118 509 aa3.73□□□□□ -1.81
GABPB1-209ENST00000559100 ANKLE1Q8NAG6 615 aa3.73□□□□□ -1.81
GABPB1-209ENST00000559100 ESF1Q9H501 851 aaKnown RBP3.73□□□□□ -1.81
GABPB1-209ENST00000559100 AMOTL2Q9Y2J4 779 aa3.73□□□□□ -1.81
GABPB1-209ENST00000559100 PRMT3O60678 531 aa3.72□□□□□ -1.81
GABPB1-209ENST00000559100 SSFA2P28290 1259 aa3.72□□□□□ -1.81
GABPB1-209ENST00000559100 MARSP56192 900 aaKnown RBP3.72□□□□□ -1.81
GABPB1-209ENST00000559100 FAM160A2Q8N612 972 aaPredicted RBP3.72□□□□□ -1.81
GABPB1-209ENST00000559100 CLP1Q92989 425 aaKnown RBP3.72□□□□□ -1.81
GABPB1-209ENST00000559100 SLC10A4Q96EP9 437 aa3.72□□□□□ -1.81
GABPB1-209ENST00000559100 HINFPQ9BQA5 517 aa3.72□□□□□ -1.81
GABPB1-209ENST00000559100 UNC93B1Q9H1C4 597 aa3.72□□□□□ -1.81
GABPB1-209ENST00000559100 SOWAHDA6NJG2 315 aa3.71□□□□□ -1.82
GABPB1-209ENST00000559100 TLL1O43897 1013 aa3.71□□□□□ -1.82
GABPB1-209ENST00000559100 SCNN1AP37088 669 aa3.71□□□□□ -1.82
GABPB1-209ENST00000559100 SERPINB4P48594 390 aa3.71□□□□□ -1.82
GABPB1-209ENST00000559100 MMP16P51512 607 aa3.71□□□□□ -1.82
GABPB1-209ENST00000559100 RAB15P59190 212 aa3.71□□□□□ -1.82
GABPB1-209ENST00000559100 GTF2IP78347 998 aa3.71□□□□□ -1.82
GABPB1-209ENST00000559100 CLDN10P78369 228 aa3.71□□□□□ -1.82
GABPB1-209ENST00000559100 LINC01559Q495D7 138 aa3.71□□□□□ -1.82
GABPB1-209ENST00000559100 RNF20Q5VTR2 975 aa3.71□□□□□ -1.82
GABPB1-209ENST00000559100 PHLDB3Q6NSJ2 640 aa3.71□□□□□ -1.82
GABPB1-209ENST00000559100 TXNDC2Q86VQ3 553 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms