RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 GLMNQ92990 594 aa5.85□□□□□ -1.47
HERC1-203ENST00000558532 INSM2Q96T92 566 aaPredicted RBP5.85□□□□□ -1.47
HERC1-203ENST00000558532 ZNF395Q9H8N7 513 aaPredicted RBP5.85□□□□□ -1.47
HERC1-203ENST00000558532 DNMT3LQ9UJW3 386 aa5.85□□□□□ -1.47
HERC1-203ENST00000558532 ATP5J2-PTCD1G3V325 749 aa5.84□□□□□ -1.47
HERC1-203ENST00000558532 CTSOP43234 321 aaPredicted RBP5.84□□□□□ -1.47
HERC1-203ENST00000558532 OXLD1Q5BKU9 147 aa5.84□□□□□ -1.47
HERC1-203ENST00000558532 FOXD4L5Q5VV16 416 aaPredicted RBP5.84□□□□□ -1.47
HERC1-203ENST00000558532 CYP2U1Q7Z449 544 aa5.84□□□□□ -1.47
HERC1-203ENST00000558532 TTLL8A6PVC2 850 aa5.83□□□□□ -1.48
HERC1-203ENST00000558532 MAP7D1Q3KQU3 841 aa5.83□□□□□ -1.48
HERC1-203ENST00000558532 TBC1D9Q6ZT07 1266 aa5.83□□□□□ -1.48
HERC1-203ENST00000558532 NFATC2IPQ8NCF5 419 aa5.83□□□□□ -1.48
HERC1-203ENST00000558532 ZNF775Q96BV0 537 aaPredicted RBP5.83□□□□□ -1.48
HERC1-203ENST00000558532 STAU1O95793 577 aaKnown RBP5.82□□□□□ -1.48
HERC1-203ENST00000558532 MYCP01106 439 aaPredicted RBP5.82□□□□□ -1.48
HERC1-203ENST00000558532 SKIP12755 728 aa5.82□□□□□ -1.48
HERC1-203ENST00000558532 RNF217Q8TC41 542 aa5.82□□□□□ -1.48
HERC1-203ENST00000558532 TRIM52Q96A61 297 aa5.82□□□□□ -1.48
HERC1-203ENST00000558532 ARHGEF10LQ9HCE6 1279 aa5.82□□□□□ -1.48
HERC1-203ENST00000558532 RAB6BQ9NRW1 208 aa5.82□□□□□ -1.48
HERC1-203ENST00000558532 A0A1W2PRU2 124 aa5.81□□□□□ -1.48
HERC1-203ENST00000558532 USP17L5A8MUK1 530 aa5.81□□□□□ -1.48
HERC1-203ENST00000558532 MAN1A2O60476 641 aa5.81□□□□□ -1.48
HERC1-203ENST00000558532 USP4Q13107 963 aa5.81□□□□□ -1.48
HERC1-203ENST00000558532 CLN3Q13286 438 aa5.81□□□□□ -1.48
HERC1-203ENST00000558532 POLMQ9NP87 494 aaPredicted RBP5.81□□□□□ -1.48
HERC1-203ENST00000558532 FIGNL2A6NMB9 653 aa5.8□□□□□ -1.48
HERC1-203ENST00000558532 ATP9BO43861 1147 aa5.8□□□□□ -1.48
HERC1-203ENST00000558532 GNRH1P01148 92 aa5.8□□□□□ -1.48
HERC1-203ENST00000558532 IL2RAP01589 272 aa5.8□□□□□ -1.48
HERC1-203ENST00000558532 NCOA4Q13772 614 aa5.8□□□□□ -1.48
HERC1-203ENST00000558532 LCE2CQ5TA81 110 aa5.8□□□□□ -1.48
HERC1-203ENST00000558532 DEPDC4Q8N2C3 294 aa5.8□□□□□ -1.48
HERC1-203ENST00000558532 ZMYND15Q9H091 742 aa5.8□□□□□ -1.48
HERC1-203ENST00000558532 ETNK1Q9HBU6 452 aa5.8□□□□□ -1.48
HERC1-203ENST00000558532 HRH3Q9Y5N1 445 aa5.8□□□□□ -1.48
HERC1-203ENST00000558532 USP17L3A6NCW0 530 aa5.79□□□□□ -1.48
HERC1-203ENST00000558532 USP17L4A6NCW7 530 aa5.79□□□□□ -1.48
HERC1-203ENST00000558532 MEN1O00255 615 aa5.79□□□□□ -1.48
HERC1-203ENST00000558532 RNF144AP50876 292 aaPredicted RBP5.79□□□□□ -1.48
HERC1-203ENST00000558532 SCNN1DP51172 638 aa5.79□□□□□ -1.48
HERC1-203ENST00000558532 NFX1Q12986 1120 aaKnown RBP5.79□□□□□ -1.48
HERC1-203ENST00000558532 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.79□□□□□ -1.48
HERC1-203ENST00000558532 EML3Q32P44 896 aa5.79□□□□□ -1.48
HERC1-203ENST00000558532 LCE2AQ5TA79 106 aaPredicted RBP5.79□□□□□ -1.48
HERC1-203ENST00000558532 USP17L2Q6R6M4 530 aa5.79□□□□□ -1.48
HERC1-203ENST00000558532 USP17L1Q7RTZ2 530 aa5.79□□□□□ -1.48
HERC1-203ENST00000558532 PLEKHM2Q8IWE5 1019 aa5.79□□□□□ -1.48
HERC1-203ENST00000558532 SIRT1Q96EB6 747 aa5.79□□□□□ -1.48
HERC1-203ENST00000558532 CALR3Q96L12 384 aaKnown RBP5.79□□□□□ -1.48
HERC1-203ENST00000558532 ZNF777Q9ULD5 760 aaPredicted RBP5.79□□□□□ -1.48
HERC1-203ENST00000558532 PCDHGA11Q9Y5H2 935 aa5.79□□□□□ -1.48
HERC1-203ENST00000558532 GPC1P35052 558 aa5.78□□□□□ -1.48
HERC1-203ENST00000558532 CNKSR1Q969H4 720 aa5.78□□□□□ -1.48
HERC1-203ENST00000558532 ESF1Q9H501 851 aaKnown RBP5.78□□□□□ -1.48
HERC1-203ENST00000558532 NXF1Q9UBU9 619 aaKnown RBP5.78□□□□□ -1.48
HERC1-203ENST00000558532 MAFBQ9Y5Q3 323 aaPredicted RBP5.78□□□□□ -1.48
HERC1-203ENST00000558532 SENP3-EIF4A1A0A087X0R7 540 aa5.77□□□□□ -1.49
HERC1-203ENST00000558532 PALM3A6NDB9 673 aaPredicted RBP5.77□□□□□ -1.49
HERC1-203ENST00000558532 TMEM229AB2RXF0 380 aa5.77□□□□□ -1.49
HERC1-203ENST00000558532 TERTO14746 1132 aaKnown RBP5.77□□□□□ -1.49
HERC1-203ENST00000558532 LZTS3O60299 673 aaPredicted RBP5.77□□□□□ -1.49
HERC1-203ENST00000558532 VEGFBP49765 207 aa5.77□□□□□ -1.49
HERC1-203ENST00000558532 PTSQ03393 145 aa5.77□□□□□ -1.49
HERC1-203ENST00000558532 XAGE2Q96GT9 111 aa5.77□□□□□ -1.49
HERC1-203ENST00000558532 ESYT1Q9BSJ8 1104 aa5.77□□□□□ -1.49
HERC1-203ENST00000558532 PPP1R12CQ9BZL4 782 aa5.77□□□□□ -1.49
HERC1-203ENST00000558532 FHDC1Q9C0D6 1143 aaPredicted RBP5.77□□□□□ -1.49
HERC1-203ENST00000558532 GRIP2Q9C0E4 1043 aa5.77□□□□□ -1.49
HERC1-203ENST00000558532 NOD1Q9Y239 953 aa5.77□□□□□ -1.49
HERC1-203ENST00000558532 WASLO00401 505 aaPredicted RBP5.76□□□□□ -1.49
HERC1-203ENST00000558532 GDF10P55107 478 aa5.76□□□□□ -1.49
HERC1-203ENST00000558532 GTF2IP78347 998 aa5.76□□□□□ -1.49
HERC1-203ENST00000558532 LYSMD3Q7Z3D4 306 aa5.76□□□□□ -1.49
HERC1-203ENST00000558532 NLRP3Q96P20 1036 aa5.76□□□□□ -1.49
HERC1-203ENST00000558532 TFIP11Q9UBB9 837 aaKnown RBP5.76□□□□□ -1.49
HERC1-203ENST00000558532 KIAA1024Q9UPX6 916 aa5.76□□□□□ -1.49
HERC1-203ENST00000558532 SLC35F4A4IF30 521 aa5.75□□□□□ -1.49
HERC1-203ENST00000558532 H3BM21 787 aa5.75□□□□□ -1.49
HERC1-203ENST00000558532 INHAP05111 366 aa5.75□□□□□ -1.49
HERC1-203ENST00000558532 CLDN10P78369 228 aa5.75□□□□□ -1.49
HERC1-203ENST00000558532 CENPCQ03188 943 aa5.75□□□□□ -1.49
HERC1-203ENST00000558532 ESCO1Q5FWF5 840 aa5.75□□□□□ -1.49
HERC1-203ENST00000558532 CFAP70Q5T0N1 1121 aa5.75□□□□□ -1.49
HERC1-203ENST00000558532 TREML4Q6UXN2 200 aa5.75□□□□□ -1.49
HERC1-203ENST00000558532 PRICKLE2Q7Z3G6 844 aa5.75□□□□□ -1.49
HERC1-203ENST00000558532 NPAS3Q8IXF0 933 aa5.75□□□□□ -1.49
HERC1-203ENST00000558532 SPATA31C2B4DYI2 1134 aa5.74□□□□□ -1.49
HERC1-203ENST00000558532 PPFIA3O75145 1194 aa5.74□□□□□ -1.49
HERC1-203ENST00000558532 RHOQP17081 205 aa5.74□□□□□ -1.49
HERC1-203ENST00000558532 SLC27A3Q5K4L6 730 aa5.74□□□□□ -1.49
HERC1-203ENST00000558532 MKRN1Q9UHC7 482 aaKnown RBP5.74□□□□□ -1.49
HERC1-203ENST00000558532 ZBTB7BO15156 539 aaPredicted RBP5.73□□□□□ -1.49
HERC1-203ENST00000558532 WFS1O76024 890 aa5.73□□□□□ -1.49
HERC1-203ENST00000558532 DKK1O94907 266 aa5.73□□□□□ -1.49
HERC1-203ENST00000558532 POU4F2Q12837 409 aa5.73□□□□□ -1.49
HERC1-203ENST00000558532 TLR1Q15399 786 aa5.73□□□□□ -1.49
HERC1-203ENST00000558532 NBPF10Q6P3W6 841 aaKnown RBP5.73□□□□□ -1.49
HERC1-203ENST00000558532 C14orf37Q86TY3 774 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms