RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 PTGIRP43119 386 aa7.12□□□□□ -1.27
LRRC28-205ENST00000558248 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.12□□□□□ -1.27
LRRC28-205ENST00000558248 SLC16A10Q8TF71 515 aa7.12□□□□□ -1.27
LRRC28-205ENST00000558248 POM121Q96HA1 1249 aa7.12□□□□□ -1.27
LRRC28-205ENST00000558248 ADD1P35611 737 aaKnown RBP7.11□□□□□ -1.27
LRRC28-205ENST00000558248 NPAS3Q8IXF0 933 aa7.11□□□□□ -1.27
LRRC28-205ENST00000558248 SIRT1Q96EB6 747 aa7.11□□□□□ -1.27
LRRC28-205ENST00000558248 INSM2Q96T92 566 aaPredicted RBP7.11□□□□□ -1.27
LRRC28-205ENST00000558248 ZNF395Q9H8N7 513 aaPredicted RBP7.11□□□□□ -1.27
LRRC28-205ENST00000558248 NXF1Q9UBU9 619 aaKnown RBP7.11□□□□□ -1.27
LRRC28-205ENST00000558248 TERTO14746 1132 aaKnown RBP7.1□□□□□ -1.27
LRRC28-205ENST00000558248 USP4Q13107 963 aa7.1□□□□□ -1.27
LRRC28-205ENST00000558248 DNMT3LQ9UJW3 386 aa7.1□□□□□ -1.27
LRRC28-205ENST00000558248 SOBPA7XYQ1 873 aa7.09□□□□□ -1.27
LRRC28-205ENST00000558248 WFS1O76024 890 aa7.09□□□□□ -1.27
LRRC28-205ENST00000558248 MAP7D1Q3KQU3 841 aa7.09□□□□□ -1.27
LRRC28-205ENST00000558248 TREML4Q6UXN2 200 aa7.09□□□□□ -1.27
LRRC28-205ENST00000558248 NLRP3Q96P20 1036 aa7.09□□□□□ -1.27
LRRC28-205ENST00000558248 FIGNL2A6NMB9 653 aa7.08□□□□□ -1.28
LRRC28-205ENST00000558248 MEN1O00255 615 aa7.08□□□□□ -1.28
LRRC28-205ENST00000558248 CTSOP43234 321 aaPredicted RBP7.08□□□□□ -1.28
LRRC28-205ENST00000558248 SCTRP47872 440 aa7.08□□□□□ -1.28
LRRC28-205ENST00000558248 OXLD1Q5BKU9 147 aa7.08□□□□□ -1.28
LRRC28-205ENST00000558248 PROSER2Q86WR7 435 aaPredicted RBP7.08□□□□□ -1.28
LRRC28-205ENST00000558248 CCDC85AQ96PX6 553 aaPredicted RBP7.08□□□□□ -1.28
LRRC28-205ENST00000558248 EIF4G1Q04637 1599 aaKnown RBP7.08□□□□□ -1.28
LRRC28-205ENST00000558248 GNRH1P01148 92 aa7.07□□□□□ -1.28
LRRC28-205ENST00000558248 PHTF2Q8N3S3 785 aa7.07□□□□□ -1.28
LRRC28-205ENST00000558248 A0A1W2PRU2 124 aa7.06□□□□□ -1.28
LRRC28-205ENST00000558248 CLN3Q13286 438 aa7.06□□□□□ -1.28
LRRC28-205ENST00000558248 ESCO1Q5FWF5 840 aa7.06□□□□□ -1.28
LRRC28-205ENST00000558248 PLPP7Q8NBV4 271 aa7.06□□□□□ -1.28
LRRC28-205ENST00000558248 RNF217Q8TC41 542 aa7.06□□□□□ -1.28
LRRC28-205ENST00000558248 IRF7Q92985 503 aa7.06□□□□□ -1.28
LRRC28-205ENST00000558248 CLUAP1Q96AJ1 413 aa7.06□□□□□ -1.28
LRRC28-205ENST00000558248 CDCA7Q9BWT1 371 aaPredicted RBP7.06□□□□□ -1.28
LRRC28-205ENST00000558248 OSBPL3Q9H4L5 887 aa7.06□□□□□ -1.28
LRRC28-205ENST00000558248 ALG2Q9H553 416 aa7.06□□□□□ -1.28
LRRC28-205ENST00000558248 ARHGEF10LQ9HCE6 1279 aa7.06□□□□□ -1.28
LRRC28-205ENST00000558248 H3BM21 787 aa7.05□□□□□ -1.28
LRRC28-205ENST00000558248 TRAK2O60296 914 aa7.05□□□□□ -1.28
LRRC28-205ENST00000558248 GTF2E1P29083 439 aaPredicted RBP7.05□□□□□ -1.28
LRRC28-205ENST00000558248 GPC1P35052 558 aa7.05□□□□□ -1.28
LRRC28-205ENST00000558248 NFX1Q12986 1120 aaKnown RBP7.05□□□□□ -1.28
LRRC28-205ENST00000558248 SLC27A3Q5K4L6 730 aa7.05□□□□□ -1.28
LRRC28-205ENST00000558248 LYSMD3Q7Z3D4 306 aa7.05□□□□□ -1.28
LRRC28-205ENST00000558248 KDF1Q8NAX2 398 aaPredicted RBP7.05□□□□□ -1.28
LRRC28-205ENST00000558248 NFATC2IPQ8NCF5 419 aa7.05□□□□□ -1.28
LRRC28-205ENST00000558248 CUX2O14529 1486 aa7.04□□□□□ -1.28
LRRC28-205ENST00000558248 SKIP12755 728 aa7.04□□□□□ -1.28
LRRC28-205ENST00000558248 RNF144AP50876 292 aaPredicted RBP7.04□□□□□ -1.28
LRRC28-205ENST00000558248 PTSQ03393 145 aa7.04□□□□□ -1.28
LRRC28-205ENST00000558248 EML3Q32P44 896 aa7.04□□□□□ -1.28
LRRC28-205ENST00000558248 CHIC2Q9UKJ5 165 aa7.04□□□□□ -1.28
LRRC28-205ENST00000558248 A6NJR5 290 aa7.03□□□□□ -1.28
LRRC28-205ENST00000558248 POM121CA8CG34 1229 aa7.03□□□□□ -1.28
LRRC28-205ENST00000558248 LZTS3O60299 673 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-205ENST00000558248 VEGFBP49765 207 aa7.03□□□□□ -1.28
LRRC28-205ENST00000558248 FOXD4L5Q5VV16 416 aaPredicted RBP7.03□□□□□ -1.28
LRRC28-205ENST00000558248 TSGA10IPQ3SY00 556 aa7.02□□□□□ -1.29
LRRC28-205ENST00000558248 HDGFL1Q5TGJ6 251 aa7.02□□□□□ -1.29
LRRC28-205ENST00000558248 PRICKLE2Q7Z3G6 844 aa7.02□□□□□ -1.29
LRRC28-205ENST00000558248 CNKSR1Q969H4 720 aa7.02□□□□□ -1.29
LRRC28-205ENST00000558248 RAB6BQ9NRW1 208 aa7.02□□□□□ -1.29
LRRC28-205ENST00000558248 NOD1Q9Y239 953 aa7.02□□□□□ -1.29
LRRC28-205ENST00000558248 SHROOM4Q9ULL8 1493 aa7.01□□□□□ -1.29
LRRC28-205ENST00000558248 PIK3CDO00329 1044 aa7.01□□□□□ -1.29
LRRC28-205ENST00000558248 PPFIA3O75145 1194 aa7.01□□□□□ -1.29
LRRC28-205ENST00000558248 CCDC155Q8N6L0 562 aa7.01□□□□□ -1.29
LRRC28-205ENST00000558248 ESYT1Q9BSJ8 1104 aa7.01□□□□□ -1.29
LRRC28-205ENST00000558248 USP17L5A8MUK1 530 aa7□□□□□ -1.29
LRRC28-205ENST00000558248 FNBP4Q8N3X1 1017 aaPredicted RBP7□□□□□ -1.29
LRRC28-205ENST00000558248 GLMNQ92990 594 aa7□□□□□ -1.29
LRRC28-205ENST00000558248 MYO15BQ96JP2 1530 aa7□□□□□ -1.29
LRRC28-205ENST00000558248 PSME1Q06323 249 aa6.99□□□□□ -1.29
LRRC28-205ENST00000558248 GNASQ5JWF2 1037 aa6.99□□□□□ -1.29
LRRC28-205ENST00000558248 TRIM50Q86XT4 487 aa6.99□□□□□ -1.29
LRRC28-205ENST00000558248 CALR3Q96L12 384 aaKnown RBP6.99□□□□□ -1.29
LRRC28-205ENST00000558248 SLC35F4A4IF30 521 aa6.98□□□□□ -1.29
LRRC28-205ENST00000558248 IL2RAP01589 272 aa6.98□□□□□ -1.29
LRRC28-205ENST00000558248 VSIG8P0DPA2 414 aa6.98□□□□□ -1.29
LRRC28-205ENST00000558248 RHOQP17081 205 aa6.98□□□□□ -1.29
LRRC28-205ENST00000558248 ITGA6P23229 1130 aa6.98□□□□□ -1.29
LRRC28-205ENST00000558248 NCOA4Q13772 614 aa6.98□□□□□ -1.29
LRRC28-205ENST00000558248 TLR1Q15399 786 aa6.98□□□□□ -1.29
LRRC28-205ENST00000558248 LCE2AQ5TA79 106 aaPredicted RBP6.98□□□□□ -1.29
LRRC28-205ENST00000558248 TMEM214Q6NUQ4 689 aaKnown RBP6.98□□□□□ -1.29
LRRC28-205ENST00000558248 TAS1R3Q7RTX0 852 aa6.98□□□□□ -1.29
LRRC28-205ENST00000558248 ZSCAN10Q96SZ4 725 aaPredicted RBP6.98□□□□□ -1.29
LRRC28-205ENST00000558248 GRIP2Q9C0E4 1043 aa6.98□□□□□ -1.29
LRRC28-205ENST00000558248 CDC14CA4D256 554 aa6.97□□□□□ -1.29
LRRC28-205ENST00000558248 WASLO00401 505 aaPredicted RBP6.97□□□□□ -1.29
LRRC28-205ENST00000558248 WIPF1O43516 503 aa6.97□□□□□ -1.29
LRRC28-205ENST00000558248 ATP9BO43861 1147 aa6.97□□□□□ -1.29
LRRC28-205ENST00000558248 ATP1A2P50993 1020 aa6.97□□□□□ -1.29
LRRC28-205ENST00000558248 GDF10P55107 478 aa6.97□□□□□ -1.29
LRRC28-205ENST00000558248 GTF2IP78347 998 aa6.97□□□□□ -1.29
LRRC28-205ENST00000558248 INSM1Q01101 510 aaPredicted RBP6.97□□□□□ -1.29
LRRC28-205ENST00000558248 CENPCQ03188 943 aa6.97□□□□□ -1.29
LRRC28-205ENST00000558248 WDR44Q5JSH3 913 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms