RNA–Protein interactions for RNA: ENST00000558070.1

TRPM1-205, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-205ENST00000558070 LILRA1O75019 489 aa6.7□□□□□ -1.34
TRPM1-205ENST00000558070 WDR4P57081 412 aaKnown RBP6.7□□□□□ -1.34
TRPM1-205ENST00000558070 ERVK-9P63128 1117 aa6.7□□□□□ -1.34
TRPM1-205ENST00000558070 TBC1D9Q6ZT07 1266 aa6.7□□□□□ -1.34
TRPM1-205ENST00000558070 PLPP7Q8NBV4 271 aa6.7□□□□□ -1.34
TRPM1-205ENST00000558070 ZNF784Q8NCA9 323 aaPredicted RBP6.7□□□□□ -1.34
TRPM1-205ENST00000558070 CDCA7Q9BWT1 371 aaPredicted RBP6.7□□□□□ -1.34
TRPM1-205ENST00000558070 PCDHB11Q9Y5F2 797 aa6.7□□□□□ -1.34
TRPM1-205ENST00000558070 ATP9BO43861 1147 aa6.69□□□□□ -1.34
TRPM1-205ENST00000558070 ZIC2O95409 532 aaPredicted RBP6.69□□□□□ -1.34
TRPM1-205ENST00000558070 Q6ZVU0 165 aa6.69□□□□□ -1.34
TRPM1-205ENST00000558070 TRIM52Q96A61 297 aa6.69□□□□□ -1.34
TRPM1-205ENST00000558070 TRIM47Q96LD4 638 aa6.69□□□□□ -1.34
TRPM1-205ENST00000558070 PPP1R12CQ9BZL4 782 aa6.69□□□□□ -1.34
TRPM1-205ENST00000558070 ZFAND3Q9H8U3 227 aa6.69□□□□□ -1.34
TRPM1-205ENST00000558070 DOLKQ9UPQ8 538 aa6.69□□□□□ -1.34
TRPM1-205ENST00000558070 PALM3A6NDB9 673 aaPredicted RBP6.68□□□□□ -1.34
TRPM1-205ENST00000558070 LZTS3O60299 673 aaPredicted RBP6.68□□□□□ -1.34
TRPM1-205ENST00000558070 SKIP12755 728 aa6.68□□□□□ -1.34
TRPM1-205ENST00000558070 NEUROD1Q13562 356 aa6.68□□□□□ -1.34
TRPM1-205ENST00000558070 PLEKHM2Q8IWE5 1019 aa6.68□□□□□ -1.34
TRPM1-205ENST00000558070 TFIP11Q9UBB9 837 aaKnown RBP6.68□□□□□ -1.34
TRPM1-205ENST00000558070 RSF1Q96T23 1441 aaPredicted RBP6.67□□□□□ -1.34
TRPM1-205ENST00000558070 USP17L5A8MUK1 530 aa6.67□□□□□ -1.34
TRPM1-205ENST00000558070 SNRPBP14678 240 aaKnown RBP6.67□□□□□ -1.34
TRPM1-205ENST00000558070 ADD1P35611 737 aaKnown RBP6.67□□□□□ -1.34
TRPM1-205ENST00000558070 SCTRP47872 440 aa6.67□□□□□ -1.34
TRPM1-205ENST00000558070 CFAP70Q5T0N1 1121 aa6.67□□□□□ -1.34
TRPM1-205ENST00000558070 DIEXFQ68CQ4 756 aaKnown RBP6.67□□□□□ -1.34
TRPM1-205ENST00000558070 CC2D2BQ6DHV5 1058 aa6.67□□□□□ -1.34
TRPM1-205ENST00000558070 CYLDQ9NQC7 956 aa6.67□□□□□ -1.34
TRPM1-205ENST00000558070 SERPINA10Q9UK55 444 aa6.67□□□□□ -1.34
TRPM1-205ENST00000558070 MAFBQ9Y5Q3 323 aaPredicted RBP6.67□□□□□ -1.34
TRPM1-205ENST00000558070 WRNQ14191 1432 aaPredicted RBP eCLIP6.67□□□□□ -1.34
TRPM1-205ENST00000558070 USP17L3A6NCW0 530 aa6.66□□□□□ -1.34
TRPM1-205ENST00000558070 USP17L4A6NCW7 530 aa6.66□□□□□ -1.34
TRPM1-205ENST00000558070 USP4Q13107 963 aa6.66□□□□□ -1.34
TRPM1-205ENST00000558070 SCARF1Q14162 830 aa6.66□□□□□ -1.34
TRPM1-205ENST00000558070 USP17L2Q6R6M4 530 aa6.66□□□□□ -1.34
TRPM1-205ENST00000558070 USP17L1Q7RTZ2 530 aa6.66□□□□□ -1.34
TRPM1-205ENST00000558070 CCDC82Q8N4S0 544 aa6.66□□□□□ -1.34
TRPM1-205ENST00000558070 MEIOBQ8N635 442 aa6.66□□□□□ -1.34
TRPM1-205ENST00000558070 CBLBQ13191 982 aa6.65□□□□□ -1.34
TRPM1-205ENST00000558070 NCOA4Q13772 614 aa6.65□□□□□ -1.34
TRPM1-205ENST00000558070 OXLD1Q5BKU9 147 aa6.65□□□□□ -1.34
TRPM1-205ENST00000558070 TRIM46Q7Z4K8 759 aa6.65□□□□□ -1.34
TRPM1-205ENST00000558070 KDF1Q8NAX2 398 aaPredicted RBP6.65□□□□□ -1.34
TRPM1-205ENST00000558070 SIRT1Q96EB6 747 aa6.65□□□□□ -1.34
TRPM1-205ENST00000558070 CCDC97Q96F63 343 aaPredicted RBP6.65□□□□□ -1.34
TRPM1-205ENST00000558070 OSBPL3Q9H4L5 887 aa6.65□□□□□ -1.34
TRPM1-205ENST00000558070 ADH1AP07327 375 aa6.64□□□□□ -1.35
TRPM1-205ENST00000558070 EML3Q32P44 896 aa6.64□□□□□ -1.35
TRPM1-205ENST00000558070 MRPL14Q6P1L8 145 aaKnown RBP6.64□□□□□ -1.35
TRPM1-205ENST00000558070 DEPDC4Q8N2C3 294 aa6.64□□□□□ -1.35
TRPM1-205ENST00000558070 UPP2O95045 317 aa6.63□□□□□ -1.35
TRPM1-205ENST00000558070 MYCP01106 439 aaPredicted RBP6.63□□□□□ -1.35
TRPM1-205ENST00000558070 TREML4Q6UXN2 200 aa6.63□□□□□ -1.35
TRPM1-205ENST00000558070 CCER1Q8TC90 406 aaPredicted RBP6.63□□□□□ -1.35
TRPM1-205ENST00000558070 ZFP42Q96MM3 310 aa6.63□□□□□ -1.35
TRPM1-205ENST00000558070 PURBQ96QR8 312 aaKnown RBP6.63□□□□□ -1.35
TRPM1-205ENST00000558070 PCDHGA11Q9Y5H2 935 aa6.63□□□□□ -1.35
TRPM1-205ENST00000558070 WFS1O76024 890 aa6.62□□□□□ -1.35
TRPM1-205ENST00000558070 LMOD1P29536 600 aaPredicted RBP6.62□□□□□ -1.35
TRPM1-205ENST00000558070 SRPK2P78362 688 aaKnown RBP6.62□□□□□ -1.35
TRPM1-205ENST00000558070 KANK4Q5T7N3 995 aaPredicted RBP6.62□□□□□ -1.35
TRPM1-205ENST00000558070 TSEN34Q9BSV6 310 aaKnown RBP6.62□□□□□ -1.35
TRPM1-205ENST00000558070 NOD1Q9Y239 953 aa6.62□□□□□ -1.35
TRPM1-205ENST00000558070 THOC2Q8NI27 1593 aaKnown RBP6.61□□□□□ -1.35
TRPM1-205ENST00000558070 ATP5J2-PTCD1G3V325 749 aa6.61□□□□□ -1.35
TRPM1-205ENST00000558070 PTGIRP43119 386 aa6.61□□□□□ -1.35
TRPM1-205ENST00000558070 C6orf118Q5T5N4 469 aa6.61□□□□□ -1.35
TRPM1-205ENST00000558070 CYP2U1Q7Z449 544 aa6.61□□□□□ -1.35
TRPM1-205ENST00000558070 LINC00528Q8N1L1 170 aa6.61□□□□□ -1.35
TRPM1-205ENST00000558070 AGBL1Q96MI9 1066 aa6.61□□□□□ -1.35
TRPM1-205ENST00000558070 ESF1Q9H501 851 aaKnown RBP6.61□□□□□ -1.35
TRPM1-205ENST00000558070 MKRN1Q9UHC7 482 aaKnown RBP6.61□□□□□ -1.35
TRPM1-205ENST00000558070 TERTO14746 1132 aaKnown RBP6.6□□□□□ -1.35
TRPM1-205ENST00000558070 GNRH1P01148 92 aa6.6□□□□□ -1.35
TRPM1-205ENST00000558070 BMP2P12643 396 aa6.6□□□□□ -1.35
TRPM1-205ENST00000558070 CLDN10P78369 228 aa6.6□□□□□ -1.35
TRPM1-205ENST00000558070 TRIM50Q86XT4 487 aa6.6□□□□□ -1.35
TRPM1-205ENST00000558070 NESP48681 1621 aa6.6□□□□□ -1.35
TRPM1-205ENST00000558070 ZBTB7BO15156 539 aaPredicted RBP6.59□□□□□ -1.35
TRPM1-205ENST00000558070 SPINT1O43278 529 aa6.59□□□□□ -1.35
TRPM1-205ENST00000558070 GTF2IP78347 998 aa6.59□□□□□ -1.35
TRPM1-205ENST00000558070 VRTNQ9H8Y1 702 aa6.59□□□□□ -1.35
TRPM1-205ENST00000558070 WASLO00401 505 aaPredicted RBP6.58□□□□□ -1.36
TRPM1-205ENST00000558070 RFX1P22670 979 aa6.58□□□□□ -1.36
TRPM1-205ENST00000558070 ATP1A2P50993 1020 aa6.58□□□□□ -1.36
TRPM1-205ENST00000558070 SCNN1DP51172 638 aa6.58□□□□□ -1.36
TRPM1-205ENST00000558070 RELBQ01201 579 aa6.58□□□□□ -1.36
TRPM1-205ENST00000558070 NFX1Q12986 1120 aaKnown RBP6.58□□□□□ -1.36
TRPM1-205ENST00000558070 CLN3Q13286 438 aa6.58□□□□□ -1.36
TRPM1-205ENST00000558070 LARGE2Q8N3Y3 721 aa6.58□□□□□ -1.36
TRPM1-205ENST00000558070 OGFOD1Q8N543 542 aa6.58□□□□□ -1.36
TRPM1-205ENST00000558070 SLC16A10Q8TF71 515 aa6.58□□□□□ -1.36
TRPM1-205ENST00000558070 EEA1Q15075 1411 aa6.58□□□□□ -1.36
TRPM1-205ENST00000558070 BAZ1AQ9NRL2 1556 aaPredicted RBP6.57□□□□□ -1.36
TRPM1-205ENST00000558070 A0A1W2PRU2 124 aa6.57□□□□□ -1.36
TRPM1-205ENST00000558070 FAM196BA6NMK8 535 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms