RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 RABEP1Q15276 862 aa13.16□□□□□ -0.3
SEMA4B-204ENST00000558065 ZSCAN16Q9H4T2 348 aaPredicted RBP13.16□□□□□ -0.3
SEMA4B-204ENST00000558065 K7ELQ4 463 aaPredicted RBP13.15□□□□□ -0.3
SEMA4B-204ENST00000558065 JAKMIP3Q5VZ66 844 aa13.15□□□□□ -0.3
SEMA4B-204ENST00000558065 RINLQ6ZS11 566 aa13.15□□□□□ -0.3
SEMA4B-204ENST00000558065 CADPS2Q86UW7 1296 aa13.15□□□□□ -0.3
SEMA4B-204ENST00000558065 PRPF38AQ8NAV1 312 aaKnown RBP13.15□□□□□ -0.3
SEMA4B-204ENST00000558065 PPM1EQ8WY54 764 aa13.15□□□□□ -0.3
SEMA4B-204ENST00000558065 CADPSQ9ULU8 1353 aa13.15□□□□□ -0.3
SEMA4B-204ENST00000558065 EIF3CLB5ME19 914 aaKnown RBP13.15□□□□□ -0.3
SEMA4B-204ENST00000558065 REXO1L1PQ8IX06 675 aa13.15□□□□□ -0.3
SEMA4B-204ENST00000558065 EIF3CQ99613 913 aaKnown RBP13.15□□□□□ -0.3
SEMA4B-204ENST00000558065 UVSSAQ2YD98 709 aa13.15□□□□□ -0.31
SEMA4B-204ENST00000558065 CCDC112Q8NEF3 446 aa13.15□□□□□ -0.31
SEMA4B-204ENST00000558065 RTF1Q92541 710 aaKnown RBP13.15□□□□□ -0.31
SEMA4B-204ENST00000558065 UBXN6Q9BZV1 441 aa13.15□□□□□ -0.31
SEMA4B-204ENST00000558065 IRAK4Q9NWZ3 460 aa13.15□□□□□ -0.31
SEMA4B-204ENST00000558065 PNMA6AP0CW24 399 aaPredicted RBP13.14□□□□□ -0.31
SEMA4B-204ENST00000558065 H2AFXP16104 143 aaPredicted RBP13.14□□□□□ -0.31
SEMA4B-204ENST00000558065 IRX1P78414 480 aaPredicted RBP13.14□□□□□ -0.31
SEMA4B-204ENST00000558065 NUCB2P80303 420 aa13.14□□□□□ -0.31
SEMA4B-204ENST00000558065 CHMP7Q8WUX9 453 aaPredicted RBP13.14□□□□□ -0.31
SEMA4B-204ENST00000558065 PAIP2Q9BPZ3 127 aaKnown RBP13.14□□□□□ -0.31
SEMA4B-204ENST00000558065 ELF2Q15723 593 aa13.14□□□□□ -0.31
SEMA4B-204ENST00000558065 ARHGAP35Q9NRY4 1499 aa13.14□□□□□ -0.31
SEMA4B-204ENST00000558065 TBC1D8BQ0IIM8 1120 aa13.14□□□□□ -0.31
SEMA4B-204ENST00000558065 ZNF215Q9UL58 517 aaPredicted RBP13.14□□□□□ -0.31
SEMA4B-204ENST00000558065 TEX14Q8IWB6 1497 aa13.13□□□□□ -0.31
SEMA4B-204ENST00000558065 ANKRD36BQ8N2N9 1353 aa13.13□□□□□ -0.31
SEMA4B-204ENST00000558065 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.13□□□□□ -0.31
SEMA4B-204ENST00000558065 V9GYY5 206 aaPredicted RBP13.13□□□□□ -0.31
SEMA4B-204ENST00000558065 ADCY2Q08462 1091 aa13.13□□□□□ -0.31
SEMA4B-204ENST00000558065 SLC24A3Q9HC58 644 aa13.13□□□□□ -0.31
SEMA4B-204ENST00000558065 PKP1Q13835 747 aa13.12□□□□□ -0.31
SEMA4B-204ENST00000558065 C16orf45Q96MC5 204 aaPredicted RBP13.12□□□□□ -0.31
SEMA4B-204ENST00000558065 TEX13AQ9BXU3 409 aaPredicted RBP13.12□□□□□ -0.31
SEMA4B-204ENST00000558065 CGNL1Q0VF96 1302 aa13.12□□□□□ -0.31
SEMA4B-204ENST00000558065 SMC2O95347 1197 aa13.12□□□□□ -0.31
SEMA4B-204ENST00000558065 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
SEMA4B-204ENST00000558065 POLR3GO15318 223 aaPredicted RBP13.12□□□□□ -0.31
SEMA4B-204ENST00000558065 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
SEMA4B-204ENST00000558065 KDM4CQ9H3R0 1056 aa13.12□□□□□ -0.31
SEMA4B-204ENST00000558065 CORO7P57737 925 aa13.11□□□□□ -0.31
SEMA4B-204ENST00000558065 THOC1Q96FV9 657 aaKnown RBP13.11□□□□□ -0.31
SEMA4B-204ENST00000558065 CFAP43Q8NDM7 1665 aa13.11□□□□□ -0.31
SEMA4B-204ENST00000558065 ANKRD18BA2A2Z9 1011 aa13.11□□□□□ -0.31
SEMA4B-204ENST00000558065 ERCC4Q92889 916 aaPredicted RBP13.11□□□□□ -0.31
SEMA4B-204ENST00000558065 PARD3Q8TEW0 1356 aa13.11□□□□□ -0.31
SEMA4B-204ENST00000558065 TPM4P67936 248 aa13.11□□□□□ -0.31
SEMA4B-204ENST00000558065 ZNF521Q96K83 1311 aa13.11□□□□□ -0.31
SEMA4B-204ENST00000558065 ZNF608Q9ULD9 1512 aaPredicted RBP13.11□□□□□ -0.31
SEMA4B-204ENST00000558065 NUTM2GQ5VZR2 741 aa13.1□□□□□ -0.31
SEMA4B-204ENST00000558065 SRRTQ9BXP5 876 aaKnown RBP13.1□□□□□ -0.31
SEMA4B-204ENST00000558065 KDM5CP41229 1560 aa13.1□□□□□ -0.31
SEMA4B-204ENST00000558065 KLHL23Q8NBE8 558 aa13.1□□□□□ -0.31
SEMA4B-204ENST00000558065 PTPRKQ15262 1439 aa13.1□□□□□ -0.31
SEMA4B-204ENST00000558065 NEBLO76041 1014 aa13.1□□□□□ -0.31
SEMA4B-204ENST00000558065 ZRANB2O95218 330 aaKnown RBP eCLIP13.1□□□□□ -0.31
SEMA4B-204ENST00000558065 BCAR3O75815 825 aa13.09□□□□□ -0.31
SEMA4B-204ENST00000558065 TPM1P09493 284 aa13.09□□□□□ -0.31
SEMA4B-204ENST00000558065 GPS2Q13227 327 aa13.09□□□□□ -0.31
SEMA4B-204ENST00000558065 MKL1Q969V6 931 aa13.09□□□□□ -0.31
SEMA4B-204ENST00000558065 PSD3Q9NYI0 1048 aa13.09□□□□□ -0.31
SEMA4B-204ENST00000558065 TSPAN18Q96SJ8 248 aa13.09□□□□□ -0.31
SEMA4B-204ENST00000558065 CUX1P39880 1505 aa13.09□□□□□ -0.31
SEMA4B-204ENST00000558065 ACTN2P35609 894 aa13.08□□□□□ -0.31
SEMA4B-204ENST00000558065 CLCN6P51797 869 aa13.08□□□□□ -0.31
SEMA4B-204ENST00000558065 CCDC26Q8TAB7 109 aa13.08□□□□□ -0.31
SEMA4B-204ENST00000558065 SMC3Q9UQE7 1217 aa13.08□□□□□ -0.31
SEMA4B-204ENST00000558065 AP5Z1O43299 807 aa13.08□□□□□ -0.32
SEMA4B-204ENST00000558065 SF3A1Q15459 793 aaKnown RBP13.08□□□□□ -0.32
SEMA4B-204ENST00000558065 ERO1AQ96HE7 468 aa13.08□□□□□ -0.32
SEMA4B-204ENST00000558065 KINO60870 393 aaKnown RBP13.08□□□□□ -0.32
SEMA4B-204ENST00000558065 SKILP12757 684 aa13.08□□□□□ -0.32
SEMA4B-204ENST00000558065 ZNF483Q8TF39 744 aaPredicted RBP13.08□□□□□ -0.32
SEMA4B-204ENST00000558065 KCNB2Q92953 911 aa13.08□□□□□ -0.32
SEMA4B-204ENST00000558065 CHAMP1Q96JM3 812 aa13.08□□□□□ -0.32
SEMA4B-204ENST00000558065 ZCCHC17Q9NP64 241 aaKnown RBP13.08□□□□□ -0.32
SEMA4B-204ENST00000558065 PCDHB15Q9Y5E8 787 aa13.08□□□□□ -0.32
SEMA4B-204ENST00000558065 TACO1Q9BSH4 297 aaKnown RBP13.07□□□□□ -0.32
SEMA4B-204ENST00000558065 BICRAQ9NZM4 1560 aa13.07□□□□□ -0.32
SEMA4B-204ENST00000558065 EPRSP07814 1512 aaKnown RBP13.07□□□□□ -0.32
SEMA4B-204ENST00000558065 MYBL2P10244 700 aa13.07□□□□□ -0.32
SEMA4B-204ENST00000558065 GRIK3Q13003 919 aa13.07□□□□□ -0.32
SEMA4B-204ENST00000558065 PLEKHO1Q53GL0 409 aaPredicted RBP13.07□□□□□ -0.32
SEMA4B-204ENST00000558065 FOXR1Q6PIV2 292 aa13.07□□□□□ -0.32
SEMA4B-204ENST00000558065 TRIM74Q86UV6 250 aa13.07□□□□□ -0.32
SEMA4B-204ENST00000558065 TRIM73Q86UV7 250 aa13.07□□□□□ -0.32
SEMA4B-204ENST00000558065 FHOD3Q2V2M9 1422 aa13.07□□□□□ -0.32
SEMA4B-204ENST00000558065 ERCC3P19447 782 aa13.07□□□□□ -0.32
SEMA4B-204ENST00000558065 TBC1D25Q3MII6 688 aa13.07□□□□□ -0.32
SEMA4B-204ENST00000558065 CWC27Q6UX04 472 aaKnown RBP13.07□□□□□ -0.32
SEMA4B-204ENST00000558065 TRMT2AQ8IZ69 625 aaKnown RBP13.07□□□□□ -0.32
SEMA4B-204ENST00000558065 ZNF232Q9UNY5 417 aa13.07□□□□□ -0.32
SEMA4B-204ENST00000558065 FMN1Q68DA7 1419 aa13.07□□□□□ -0.32
SEMA4B-204ENST00000558065 TTLL5Q6EMB2 1281 aa13.06□□□□□ -0.32
SEMA4B-204ENST00000558065 PMFBP1Q8TBY8 1022 aa13.06□□□□□ -0.32
SEMA4B-204ENST00000558065 ZDHHC9Q9Y397 364 aa13.06□□□□□ -0.32
SEMA4B-204ENST00000558065 PRXQ9BXM0 1461 aa13.06□□□□□ -0.32
SEMA4B-204ENST00000558065 KDM4AO75164 1064 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms