RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 A0A1W2PP64 1363 aa15.91■□□□□ 0.14
LINC00648-204ENST00000557749 ATMINO43313 823 aaPredicted RBP15.91■□□□□ 0.14
LINC00648-204ENST00000557749 SLC12A5Q9H2X9 1139 aa15.91■□□□□ 0.14
LINC00648-204ENST00000557749 ANKRD36BQ8N2N9 1353 aa15.9■□□□□ 0.14
LINC00648-204ENST00000557749 ZBTB7CA1YPR0 619 aa15.9■□□□□ 0.14
LINC00648-204ENST00000557749 ASTLQ6HA08 431 aaPredicted RBP15.9■□□□□ 0.14
LINC00648-204ENST00000557749 ARHGEF25Q86VW2 580 aa15.9■□□□□ 0.14
LINC00648-204ENST00000557749 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.9■□□□□ 0.14
LINC00648-204ENST00000557749 TMEM106CQ9BVX2 250 aa15.9■□□□□ 0.14
LINC00648-204ENST00000557749 PDE3BQ13370 1112 aa15.89■□□□□ 0.13
LINC00648-204ENST00000557749 LARP1Q6PKG0 1096 aaKnown RBP15.89■□□□□ 0.13
LINC00648-204ENST00000557749 PELP1Q8IZL8 1130 aaKnown RBP15.89■□□□□ 0.13
LINC00648-204ENST00000557749 BAG6P46379 1132 aa15.88■□□□□ 0.13
LINC00648-204ENST00000557749 ATN1P54259 1190 aaPredicted RBP15.88■□□□□ 0.13
LINC00648-204ENST00000557749 FAM196AQ6ZSG2 479 aa15.88■□□□□ 0.13
LINC00648-204ENST00000557749 TOM1L2Q6ZVM7 507 aa15.88■□□□□ 0.13
LINC00648-204ENST00000557749 USP35Q9P2H5 1018 aa15.88■□□□□ 0.13
LINC00648-204ENST00000557749 WDR17Q8IZU2 1322 aa15.88■□□□□ 0.13
LINC00648-204ENST00000557749 NFAT5O94916 1531 aa15.88■□□□□ 0.13
LINC00648-204ENST00000557749 EP400Q96L91 3159 aa15.87■□□□□ 0.13
LINC00648-204ENST00000557749 RGPD1P0DJD0 1748 aa15.86■□□□□ 0.13
LINC00648-204ENST00000557749 CSB-PGBD3P0DP91 1061 aa15.86■□□□□ 0.13
LINC00648-204ENST00000557749 HS6ST3Q8IZP7 471 aa15.86■□□□□ 0.13
LINC00648-204ENST00000557749 COG3Q96JB2 828 aa15.86■□□□□ 0.13
LINC00648-204ENST00000557749 BCL11BQ9C0K0 894 aaPredicted RBP15.86■□□□□ 0.13
LINC00648-204ENST00000557749 CCDC7Q96M83 1385 aa15.86■□□□□ 0.13
LINC00648-204ENST00000557749 OVOS2A0A0J9YW53 1432 aa15.85■□□□□ 0.13
LINC00648-204ENST00000557749 OVOS2Q6IE36 1432 aa15.85■□□□□ 0.13
LINC00648-204ENST00000557749 SOX12O15370 315 aa15.85■□□□□ 0.13
LINC00648-204ENST00000557749 NME9Q86XW9 330 aa15.85■□□□□ 0.13
LINC00648-204ENST00000557749 COL18A1P39060 1754 aa15.85■□□□□ 0.13
LINC00648-204ENST00000557749 STK25O00506 426 aa15.84■□□□□ 0.13
LINC00648-204ENST00000557749 EIF4G2P78344 907 aaKnown RBP eCLIP15.84■□□□□ 0.13
LINC00648-204ENST00000557749 CARD10Q9BWT7 1032 aa15.84■□□□□ 0.13
LINC00648-204ENST00000557749 PARP4Q9UKK3 1724 aaKnown RBP15.84■□□□□ 0.13
LINC00648-204ENST00000557749 PARD3Q8TEW0 1356 aa15.83■□□□□ 0.12
LINC00648-204ENST00000557749 DISP2A7MBM2 1401 aa15.82■□□□□ 0.12
LINC00648-204ENST00000557749 OVOS2A0A0G2JMS6 1433 aa15.81■□□□□ 0.12
LINC00648-204ENST00000557749 DDB1Q16531 1140 aa15.81■□□□□ 0.12
LINC00648-204ENST00000557749 DCBLD2Q96PD2 775 aa15.81■□□□□ 0.12
LINC00648-204ENST00000557749 TAOK2Q9UL54 1235 aa15.81■□□□□ 0.12
LINC00648-204ENST00000557749 ERBB3P21860 1342 aa15.8■□□□□ 0.12
LINC00648-204ENST00000557749 AXIN2Q9Y2T1 843 aa15.8■□□□□ 0.12
LINC00648-204ENST00000557749 LTN1O94822 1766 aa15.8■□□□□ 0.12
LINC00648-204ENST00000557749 RTL1A6NKG5 1358 aa15.79■□□□□ 0.12
LINC00648-204ENST00000557749 TRIM35Q9UPQ4 493 aa15.79■□□□□ 0.12
LINC00648-204ENST00000557749 STK24Q9Y6E0 443 aa15.79■□□□□ 0.12
LINC00648-204ENST00000557749 NKX1-1Q15270 411 aaPredicted RBP15.78■□□□□ 0.12
LINC00648-204ENST00000557749 FAM208AQ9UK61 1670 aaKnown RBP15.78■□□□□ 0.12
LINC00648-204ENST00000557749 WNK3Q9BYP7 1800 aa15.78■□□□□ 0.12
LINC00648-204ENST00000557749 KIF24Q5T7B8 1368 aa15.77■□□□□ 0.12
LINC00648-204ENST00000557749 IP6K1Q92551 441 aa15.77■□□□□ 0.12
LINC00648-204ENST00000557749 BCL9O00512 1426 aa15.77■□□□□ 0.11
LINC00648-204ENST00000557749 LRRC37A3O60309 1634 aa15.76■□□□□ 0.11
LINC00648-204ENST00000557749 EXOC5O00471 708 aa15.76■□□□□ 0.11
LINC00648-204ENST00000557749 AMPHP49418 695 aa15.76■□□□□ 0.11
LINC00648-204ENST00000557749 DEFB132Q7Z7B7 95 aa15.76■□□□□ 0.11
LINC00648-204ENST00000557749 NLRP2Q9NX02 1062 aa15.76■□□□□ 0.11
LINC00648-204ENST00000557749 SMG6Q86US8 1419 aaKnown RBP15.76■□□□□ 0.11
LINC00648-204ENST00000557749 RGPD5Q99666 1765 aa15.75■□□□□ 0.11
LINC00648-204ENST00000557749 CGNL1Q0VF96 1302 aa15.75■□□□□ 0.11
LINC00648-204ENST00000557749 ANKRD24Q8TF21 1146 aa15.75■□□□□ 0.11
LINC00648-204ENST00000557749 TNS1Q9HBL0 1735 aaKnown RBP15.74■□□□□ 0.11
LINC00648-204ENST00000557749 KIF20BQ96Q89 1820 aa15.74■□□□□ 0.11
LINC00648-204ENST00000557749 FYB1O15117 783 aa15.74■□□□□ 0.11
LINC00648-204ENST00000557749 TRIM37O94972 964 aa15.74■□□□□ 0.11
LINC00648-204ENST00000557749 EFCAB3Q8N7B9 438 aa15.74■□□□□ 0.11
LINC00648-204ENST00000557749 TNS2Q63HR2 1409 aa15.74■□□□□ 0.11
LINC00648-204ENST00000557749 APBA3O96018 575 aa15.73■□□□□ 0.11
LINC00648-204ENST00000557749 IL2RBP14784 551 aa15.73■□□□□ 0.11
LINC00648-204ENST00000557749 FAM182BQ5T319 152 aa15.73■□□□□ 0.11
LINC00648-204ENST00000557749 NSD3Q9BZ95 1437 aa15.73■□□□□ 0.11
LINC00648-204ENST00000557749 MYOM1P52179 1685 aa15.73■□□□□ 0.11
LINC00648-204ENST00000557749 MAP3K19Q56UN5 1328 aa15.72■□□□□ 0.11
LINC00648-204ENST00000557749 HSPA5P11021 654 aaKnown RBP15.71■□□□□ 0.11
LINC00648-204ENST00000557749 HOXC9P31274 260 aa15.71■□□□□ 0.11
LINC00648-204ENST00000557749 EN1Q05925 392 aaPredicted RBP15.71■□□□□ 0.11
LINC00648-204ENST00000557749 GGNBP2Q9H3C7 697 aa15.71■□□□□ 0.11
LINC00648-204ENST00000557749 PEAK1Q9H792 1746 aa15.7■□□□□ 0.1
LINC00648-204ENST00000557749 FLT4P35916 1363 aa15.7■□□□□ 0.1
LINC00648-204ENST00000557749 RGPD3A6NKT7 1758 aaPredicted RBP15.7■□□□□ 0.1
LINC00648-204ENST00000557749 RGPD4Q7Z3J3 1758 aa15.7■□□□□ 0.1
LINC00648-204ENST00000557749 NBPF14Q5TI25 921 aa15.69■□□□□ 0.1
LINC00648-204ENST00000557749 POLR3GLQ9BT43 218 aa15.69■□□□□ 0.1
LINC00648-204ENST00000557749 NSD2O96028 1365 aa15.69■□□□□ 0.1
LINC00648-204ENST00000557749 POTEFA5A3E0 1075 aa15.68■□□□□ 0.1
LINC00648-204ENST00000557749 CAMKK2Q96RR4 588 aa15.68■□□□□ 0.1
LINC00648-204ENST00000557749 INSRP06213 1382 aa15.67■□□□□ 0.1
LINC00648-204ENST00000557749 PLSCR1O15162 318 aa15.67■□□□□ 0.1
LINC00648-204ENST00000557749 EZH2Q15910 746 aaKnown RBP15.66■□□□□ 0.1
LINC00648-204ENST00000557749 MARCH10Q8NA82 808 aaPredicted RBP15.66■□□□□ 0.1
LINC00648-204ENST00000557749 CARD14Q9BXL6 1004 aa15.66■□□□□ 0.1
LINC00648-204ENST00000557749 RRS1Q15050 365 aaKnown RBP15.65■□□□□ 0.1
LINC00648-204ENST00000557749 LTV1Q96GA3 475 aaPredicted RBP15.65■□□□□ 0.1
LINC00648-204ENST00000557749 MFRPQ9BY79 579 aa15.65■□□□□ 0.1
LINC00648-204ENST00000557749 SBF2Q86WG5 1849 aa15.64■□□□□ 0.09
LINC00648-204ENST00000557749 BBXQ8WY36 941 aaPredicted RBP15.64■□□□□ 0.09
LINC00648-204ENST00000557749 RAPGEF4Q8WZA2 1011 aa15.64■□□□□ 0.09
LINC00648-204ENST00000557749 RREB1Q92766 1687 aa15.63■□□□□ 0.09
LINC00648-204ENST00000557749 HMGB2P26583 209 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms