RNA–Protein interactions for RNA: ENST00000557357.5

PSMC1-207, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 4

Gene PSMC1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-207ENST00000557357 CPDO75976 1380 aa10.65□□□□□ -0.7
PSMC1-207ENST00000557357 RGPD3A6NKT7 1758 aaPredicted RBP10.65□□□□□ -0.7
PSMC1-207ENST00000557357 RGPD4Q7Z3J3 1758 aa10.65□□□□□ -0.7
PSMC1-207ENST00000557357 EVA1CP58658 441 aa10.65□□□□□ -0.7
PSMC1-207ENST00000557357 NUTM2GQ5VZR2 741 aa10.65□□□□□ -0.7
PSMC1-207ENST00000557357 LARP1Q6PKG0 1096 aaKnown RBP10.65□□□□□ -0.7
PSMC1-207ENST00000557357 SPON1Q9HCB6 807 aa10.65□□□□□ -0.7
PSMC1-207ENST00000557357 SBF2Q86WG5 1849 aa10.65□□□□□ -0.71
PSMC1-207ENST00000557357 NINLQ9Y2I6 1382 aa10.65□□□□□ -0.71
PSMC1-207ENST00000557357 PEAK1Q9H792 1746 aa10.64□□□□□ -0.71
PSMC1-207ENST00000557357 KCNQ2O43526 872 aa10.64□□□□□ -0.71
PSMC1-207ENST00000557357 PDCD7Q8N8D1 485 aaKnown RBP10.64□□□□□ -0.71
PSMC1-207ENST00000557357 DCAF11Q8TEB1 546 aa10.64□□□□□ -0.71
PSMC1-207ENST00000557357 MARVELD3Q96A59 401 aa10.64□□□□□ -0.71
PSMC1-207ENST00000557357 L3MBTL3Q96JM7 780 aaPredicted RBP10.64□□□□□ -0.71
PSMC1-207ENST00000557357 STAC3Q96MF2 364 aa10.64□□□□□ -0.71
PSMC1-207ENST00000557357 KDM2AQ9Y2K7 1162 aa10.64□□□□□ -0.71
PSMC1-207ENST00000557357 THRAP3Q9Y2W1 955 aaKnown RBP10.64□□□□□ -0.71
PSMC1-207ENST00000557357 USP19O94966 1318 aa10.63□□□□□ -0.71
PSMC1-207ENST00000557357 ACEP12821 1306 aa10.63□□□□□ -0.71
PSMC1-207ENST00000557357 SOX12O15370 315 aa10.63□□□□□ -0.71
PSMC1-207ENST00000557357 CDK19Q9BWU1 502 aa10.63□□□□□ -0.71
PSMC1-207ENST00000557357 CASZ1Q86V15 1759 aa10.62□□□□□ -0.71
PSMC1-207ENST00000557357 COL5A2P05997 1499 aaPredicted RBP10.62□□□□□ -0.71
PSMC1-207ENST00000557357 PLEKHG3A1L390 1219 aa10.62□□□□□ -0.71
PSMC1-207ENST00000557357 C11orf95C9JLR9 678 aaPredicted RBP10.62□□□□□ -0.71
PSMC1-207ENST00000557357 ABTB2Q8N961 1025 aa10.62□□□□□ -0.71
PSMC1-207ENST00000557357 PPP1R1BQ9UD71 204 aaPredicted RBP10.62□□□□□ -0.71
PSMC1-207ENST00000557357 LRRC37A3O60309 1634 aa10.62□□□□□ -0.71
PSMC1-207ENST00000557357 C3orf67Q6ZVT6 689 aa10.61□□□□□ -0.71
PSMC1-207ENST00000557357 RAB3GAP2Q9H2M9 1393 aa10.61□□□□□ -0.71
PSMC1-207ENST00000557357 OVOS2A0A0G2JMS6 1433 aa10.6□□□□□ -0.71
PSMC1-207ENST00000557357 OVOS2A0A0J9YW53 1432 aa10.6□□□□□ -0.71
PSMC1-207ENST00000557357 CRB1P82279 1406 aa10.6□□□□□ -0.71
PSMC1-207ENST00000557357 OVOS2Q6IE36 1432 aa10.6□□□□□ -0.71
PSMC1-207ENST00000557357 G3V3G9 751 aa10.6□□□□□ -0.71
PSMC1-207ENST00000557357 PLSCR1O15162 318 aa10.6□□□□□ -0.71
PSMC1-207ENST00000557357 GCP02774 474 aa10.6□□□□□ -0.71
PSMC1-207ENST00000557357 WNK3Q9BYP7 1800 aa10.6□□□□□ -0.71
PSMC1-207ENST00000557357 KIAA1210Q9ULL0 1709 aa10.59□□□□□ -0.71
PSMC1-207ENST00000557357 NLRP13Q86W25 1043 aa10.59□□□□□ -0.71
PSMC1-207ENST00000557357 ANO8Q9HCE9 1232 aaPredicted RBP10.59□□□□□ -0.71
PSMC1-207ENST00000557357 COL18A1P39060 1754 aa10.58□□□□□ -0.72
PSMC1-207ENST00000557357 DPY19L2Q6NUT2 758 aa10.58□□□□□ -0.72
PSMC1-207ENST00000557357 HS6ST3Q8IZP7 471 aa10.58□□□□□ -0.72
PSMC1-207ENST00000557357 RTN4Q9NQC3 1192 aaKnown RBP10.58□□□□□ -0.72
PSMC1-207ENST00000557357 AKAP12Q02952 1782 aa10.57□□□□□ -0.72
PSMC1-207ENST00000557357 MYOM1P52179 1685 aa10.57□□□□□ -0.72
PSMC1-207ENST00000557357 BRD4O60885 1362 aaPredicted RBP10.57□□□□□ -0.72
PSMC1-207ENST00000557357 EMP3P54852 163 aa10.57□□□□□ -0.72
PSMC1-207ENST00000557357 NLRP6P59044 892 aa10.57□□□□□ -0.72
PSMC1-207ENST00000557357 SLIT3O75094 1523 aa10.57□□□□□ -0.72
PSMC1-207ENST00000557357 BCL9O00512 1426 aa10.57□□□□□ -0.72
PSMC1-207ENST00000557357 PPIP5K1Q6PFW1 1433 aa10.57□□□□□ -0.72
PSMC1-207ENST00000557357 AATKQ6ZMQ8 1374 aa10.56□□□□□ -0.72
PSMC1-207ENST00000557357 DDB1Q16531 1140 aa10.56□□□□□ -0.72
PSMC1-207ENST00000557357 PTF1AQ7RTS3 328 aa10.56□□□□□ -0.72
PSMC1-207ENST00000557357 PDGFDQ9GZP0 370 aaPredicted RBP10.56□□□□□ -0.72
PSMC1-207ENST00000557357 CHD4Q14839 1912 aa10.56□□□□□ -0.72
PSMC1-207ENST00000557357 PTGER2P43116 358 aa10.55□□□□□ -0.72
PSMC1-207ENST00000557357 RGPD5Q99666 1765 aa10.54□□□□□ -0.72
PSMC1-207ENST00000557357 ZBTB7AO95365 584 aa10.54□□□□□ -0.72
PSMC1-207ENST00000557357 USP6P35125 1406 aa10.54□□□□□ -0.72
PSMC1-207ENST00000557357 MARCH10Q8NA82 808 aaPredicted RBP10.54□□□□□ -0.72
PSMC1-207ENST00000557357 ZNF784Q8NCA9 323 aaPredicted RBP10.54□□□□□ -0.72
PSMC1-207ENST00000557357 PIK3C2AO00443 1686 aa10.53□□□□□ -0.72
PSMC1-207ENST00000557357 SRPK2P78362 688 aaKnown RBP10.53□□□□□ -0.72
PSMC1-207ENST00000557357 TOM1L2Q6ZVM7 507 aa10.53□□□□□ -0.72
PSMC1-207ENST00000557357 MFRPQ9BY79 579 aa10.53□□□□□ -0.72
PSMC1-207ENST00000557357 BOLA1Q9Y3E2 137 aa10.53□□□□□ -0.72
PSMC1-207ENST00000557357 QRICH2Q9H0J4 1663 aa10.53□□□□□ -0.72
PSMC1-207ENST00000557357 WDR17Q8IZU2 1322 aa10.53□□□□□ -0.72
PSMC1-207ENST00000557357 ZBTB7CA1YPR0 619 aa10.52□□□□□ -0.73
PSMC1-207ENST00000557357 NBPF1Q3BBV0 1214 aa10.52□□□□□ -0.73
PSMC1-207ENST00000557357 CDCA7Q9BWT1 371 aaPredicted RBP10.52□□□□□ -0.73
PSMC1-207ENST00000557357 KRTAP3-3Q9BYR6 98 aa10.52□□□□□ -0.73
PSMC1-207ENST00000557357 KRTAP3-2Q9BYR7 98 aa10.52□□□□□ -0.73
PSMC1-207ENST00000557357 AXIN2Q9Y2T1 843 aa10.52□□□□□ -0.73
PSMC1-207ENST00000557357 CPSF1Q10570 1443 aaKnown RBP10.51□□□□□ -0.73
PSMC1-207ENST00000557357 TXNRD1Q16881 649 aa10.51□□□□□ -0.73
PSMC1-207ENST00000557357 MS4A4AQ96JQ5 239 aa10.51□□□□□ -0.73
PSMC1-207ENST00000557357 HS3ST6Q96QI5 342 aa10.51□□□□□ -0.73
PSMC1-207ENST00000557357 SYT17Q9BSW7 474 aa10.51□□□□□ -0.73
PSMC1-207ENST00000557357 CABP1Q9NZU7 370 aa10.51□□□□□ -0.73
PSMC1-207ENST00000557357 CENPJQ9HC77 1338 aaPredicted RBP10.51□□□□□ -0.73
PSMC1-207ENST00000557357 POTEB3A0JP26 581 aa10.5□□□□□ -0.73
PSMC1-207ENST00000557357 SLC15A2Q16348 729 aa10.5□□□□□ -0.73
PSMC1-207ENST00000557357 POTEBQ6S5H4 581 aa10.5□□□□□ -0.73
PSMC1-207ENST00000557357 FHDC1Q9C0D6 1143 aaPredicted RBP10.5□□□□□ -0.73
PSMC1-207ENST00000557357 MTFR1LQ9H019 292 aa10.5□□□□□ -0.73
PSMC1-207ENST00000557357 STK32BQ9NY57 414 aa10.5□□□□□ -0.73
PSMC1-207ENST00000557357 TRPM1Q7Z4N2 1603 aa10.5□□□□□ -0.73
PSMC1-207ENST00000557357 NHSQ6T4R5 1651 aa10.5□□□□□ -0.73
PSMC1-207ENST00000557357 PAPPAQ13219 1627 aa10.49□□□□□ -0.73
PSMC1-207ENST00000557357 ARHGEF25Q86VW2 580 aa10.49□□□□□ -0.73
PSMC1-207ENST00000557357 FBXO22Q8NEZ5 403 aa10.49□□□□□ -0.73
PSMC1-207ENST00000557357 CARD10Q9BWT7 1032 aa10.49□□□□□ -0.73
PSMC1-207ENST00000557357 FAM205CA6NFA0 338 aa10.48□□□□□ -0.73
PSMC1-207ENST00000557357 EXOC5O00471 708 aa10.47□□□□□ -0.73
PSMC1-207ENST00000557357 KCNH5Q8NCM2 988 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms