RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 CSB-PGBD3P0DP91 1061 aa31.25■■■□□ 2.59
SIX4-203ENST00000556952 ANKRD24Q8TF21 1146 aa31.25■■■□□ 2.59
SIX4-203ENST00000556952 ZNF521Q96K83 1311 aa31.24■■■□□ 2.59
SIX4-203ENST00000556952 TOM1L2Q6ZVM7 507 aa31.24■■■□□ 2.59
SIX4-203ENST00000556952 LTV1Q96GA3 475 aaPredicted RBP31.23■■■□□ 2.59
SIX4-203ENST00000556952 CCDC27Q2M243 656 aa31.22■■■□□ 2.59
SIX4-203ENST00000556952 NCAPD2Q15021 1401 aa31.22■■■□□ 2.59
SIX4-203ENST00000556952 ONECUT3O60422 494 aaPredicted RBP31.22■■■□□ 2.59
SIX4-203ENST00000556952 AEBP1Q8IUX7 1158 aa31.22■■■□□ 2.59
SIX4-203ENST00000556952 SEPT12Q8IYM1 358 aa31.2■■■□□ 2.58
SIX4-203ENST00000556952 TMPOP42166 694 aaKnown RBP31.19■■■□□ 2.58
SIX4-203ENST00000556952 DLG5Q8TDM6 1919 aa31.19■■■□□ 2.58
SIX4-203ENST00000556952 CARD10Q9BWT7 1032 aa31.17■■■□□ 2.58
SIX4-203ENST00000556952 PARP4Q9UKK3 1724 aaKnown RBP31.17■■■□□ 2.58
SIX4-203ENST00000556952 RRP7AQ9Y3A4 280 aaKnown RBP31.17■■■□□ 2.58
SIX4-203ENST00000556952 A0A0G2JS52 829 aa31.16■■■□□ 2.58
SIX4-203ENST00000556952 MYT1Q01538 1121 aa31.16■■■□□ 2.58
SIX4-203ENST00000556952 BARGINQ6ZT62 677 aa31.16■■■□□ 2.58
SIX4-203ENST00000556952 NLRP2Q9NX02 1062 aa31.16■■■□□ 2.58
SIX4-203ENST00000556952 NEUROD2Q15784 382 aa31.15■■■□□ 2.58
SIX4-203ENST00000556952 NFE2L2Q16236 605 aa31.15■■■□□ 2.58
SIX4-203ENST00000556952 WWC1Q8IX03 1113 aa31.15■■■□□ 2.58
SIX4-203ENST00000556952 PHACTR3Q96KR7 559 aa31.15■■■□□ 2.58
SIX4-203ENST00000556952 THRAP3Q9Y2W1 955 aaKnown RBP31.15■■■□□ 2.58
SIX4-203ENST00000556952 EP400Q96L91 3159 aa31.15■■■□□ 2.58
SIX4-203ENST00000556952 NBPF6Q5VWK0 638 aa31.14■■■□□ 2.58
SIX4-203ENST00000556952 NBPF4Q96M43 638 aa31.14■■■□□ 2.58
SIX4-203ENST00000556952 GOLGA2Q08379 1002 aa31.13■■■□□ 2.57
SIX4-203ENST00000556952 LRRC37A3O60309 1634 aa31.13■■■□□ 2.57
SIX4-203ENST00000556952 DISP2A7MBM2 1401 aa31.12■■■□□ 2.57
SIX4-203ENST00000556952 RIPK4P57078 832 aa31.11■■■□□ 2.57
SIX4-203ENST00000556952 WDR63Q8IWG1 891 aa31.09■■■□□ 2.57
SIX4-203ENST00000556952 LMOD3Q0VAK6 560 aa31.08■■■□□ 2.57
SIX4-203ENST00000556952 USHBP1Q8N6Y0 703 aa31.08■■■□□ 2.57
SIX4-203ENST00000556952 TRIM35Q9UPQ4 493 aa31.08■■■□□ 2.57
SIX4-203ENST00000556952 CDCA7LQ96GN5 454 aa31.07■■■□□ 2.56
SIX4-203ENST00000556952 PLEKHG2Q9H7P9 1386 aa31.05■■■□□ 2.56
SIX4-203ENST00000556952 E9PSI1 815 aa31.05■■■□□ 2.56
SIX4-203ENST00000556952 GAS2L2Q8NHY3 880 aa31.05■■■□□ 2.56
SIX4-203ENST00000556952 SOCS7O14512 581 aa31.04■■■□□ 2.56
SIX4-203ENST00000556952 SLFN5Q08AF3 891 aa31.04■■■□□ 2.56
SIX4-203ENST00000556952 KRT27Q7Z3Y8 459 aa31.04■■■□□ 2.56
SIX4-203ENST00000556952 IL16Q14005 1332 aa31.01■■■□□ 2.55
SIX4-203ENST00000556952 FAM182BQ5T319 152 aa31■■■□□ 2.55
SIX4-203ENST00000556952 TRMT2AQ8IZ69 625 aaKnown RBP31■■■□□ 2.55
SIX4-203ENST00000556952 MEGF6O75095 1541 aa31■■■□□ 2.55
SIX4-203ENST00000556952 MTHFSDQ2M296 383 aaKnown RBP31■■■□□ 2.55
SIX4-203ENST00000556952 IL2RBP14784 551 aa30.99■■■□□ 2.55
SIX4-203ENST00000556952 CALD1Q05682 793 aaKnown RBP30.99■■■□□ 2.55
SIX4-203ENST00000556952 DUSP27Q5VZP5 1158 aa30.99■■■□□ 2.55
SIX4-203ENST00000556952 CDCA7Q9BWT1 371 aaPredicted RBP30.99■■■□□ 2.55
SIX4-203ENST00000556952 DDB1Q16531 1140 aa30.97■■■□□ 2.55
SIX4-203ENST00000556952 TNS2Q63HR2 1409 aa30.97■■■□□ 2.55
SIX4-203ENST00000556952 SHANK3Q9BYB0 1731 aa30.97■■■□□ 2.55
SIX4-203ENST00000556952 SPINK5Q9NQ38 1064 aaPredicted RBP30.96■■■□□ 2.55
SIX4-203ENST00000556952 AMOTQ4VCS5 1084 aa30.96■■■□□ 2.55
SIX4-203ENST00000556952 PKD1L3Q7Z443 1732 aa30.95■■■□□ 2.55
SIX4-203ENST00000556952 RAPGEF4Q8WZA2 1011 aa30.94■■■□□ 2.54
SIX4-203ENST00000556952 MYH16Q9H6N6 1097 aa30.94■■■□□ 2.54
SIX4-203ENST00000556952 HTATSF1O43719 755 aaKnown RBP30.93■■■□□ 2.54
SIX4-203ENST00000556952 PLEKHO1Q53GL0 409 aaPredicted RBP30.93■■■□□ 2.54
SIX4-203ENST00000556952 MAP3K5Q99683 1374 aa30.93■■■□□ 2.54
SIX4-203ENST00000556952 OVOS2A0A0G2JMS6 1433 aa30.91■■■□□ 2.54
SIX4-203ENST00000556952 UPF1Q92900 1129 aaKnown RBP eCLIP30.91■■■□□ 2.54
SIX4-203ENST00000556952 EXOC5O00471 708 aa30.9■■■□□ 2.54
SIX4-203ENST00000556952 TATP17735 454 aaPredicted RBP30.9■■■□□ 2.54
SIX4-203ENST00000556952 RTF1Q92541 710 aaKnown RBP30.9■■■□□ 2.54
SIX4-203ENST00000556952 GNAT3A8MTJ3 354 aa30.89■■■□□ 2.54
SIX4-203ENST00000556952 MARCH10Q8NA82 808 aaPredicted RBP30.89■■■□□ 2.54
SIX4-203ENST00000556952 VIRMAQ69YN4 1812 aaKnown RBP30.89■■■□□ 2.54
SIX4-203ENST00000556952 SBF2Q86WG5 1849 aa30.89■■■□□ 2.53
SIX4-203ENST00000556952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.88■■■□□ 2.53
SIX4-203ENST00000556952 IFT57Q9NWB7 429 aa30.86■■■□□ 2.53
SIX4-203ENST00000556952 THUMPD2Q9BTF0 503 aaKnown RBP30.85■■■□□ 2.53
SIX4-203ENST00000556952 GNAI1P63096 354 aa30.84■■■□□ 2.53
SIX4-203ENST00000556952 AKAP4Q5JQC9 854 aa30.84■■■□□ 2.53
SIX4-203ENST00000556952 ZNF530Q6P9A1 599 aaPredicted RBP30.84■■■□□ 2.53
SIX4-203ENST00000556952 FANCIQ9NVI1 1328 aa30.84■■■□□ 2.53
SIX4-203ENST00000556952 TNS1Q9HBL0 1735 aaKnown RBP30.84■■■□□ 2.53
SIX4-203ENST00000556952 ADAMTS7Q9UKP4 1686 aa30.83■■■□□ 2.53
SIX4-203ENST00000556952 DCTN1Q14203 1278 aa30.83■■■□□ 2.53
SIX4-203ENST00000556952 SPG7Q9UQ90 795 aa30.83■■■□□ 2.53
SIX4-203ENST00000556952 MCM10Q7L590 875 aa30.83■■■□□ 2.53
SIX4-203ENST00000556952 C1orf141Q5JVX7 400 aa30.82■■■□□ 2.52
SIX4-203ENST00000556952 FAM196AQ6ZSG2 479 aa30.82■■■□□ 2.52
SIX4-203ENST00000556952 RCAN3Q9UKA8 241 aa30.82■■■□□ 2.52
SIX4-203ENST00000556952 ZNF853P0CG23 659 aa30.81■■■□□ 2.52
SIX4-203ENST00000556952 ZCRB1Q8TBF4 217 aaKnown RBP30.81■■■□□ 2.52
SIX4-203ENST00000556952 CFAP44Q96MT7 982 aa30.81■■■□□ 2.52
SIX4-203ENST00000556952 SUPT16HQ9Y5B9 1047 aaKnown RBP30.8■■■□□ 2.52
SIX4-203ENST00000556952 DDX54Q8TDD1 881 aaKnown RBP30.79■■■□□ 2.52
SIX4-203ENST00000556952 CEMIPQ8WUJ3 1361 aa30.78■■■□□ 2.52
SIX4-203ENST00000556952 SCN11AQ9UI33 1791 aa30.78■■■□□ 2.52
SIX4-203ENST00000556952 TSR2Q969E8 191 aaKnown RBP30.78■■■□□ 2.52
SIX4-203ENST00000556952 CT47B1P0C2W7 299 aaPredicted RBP30.76■■■□□ 2.52
SIX4-203ENST00000556952 LAS1LQ9Y4W2 734 aaKnown RBP30.76■■■□□ 2.52
SIX4-203ENST00000556952 BCL9O00512 1426 aa30.76■■■□□ 2.51
SIX4-203ENST00000556952 DOT1LQ8TEK3 1739 aa30.76■■■□□ 2.51
SIX4-203ENST00000556952 KAT6BQ8WYB5 2073 aa30.76■■■□□ 2.51
SIX4-203ENST00000556952 TRIM37O94972 964 aa30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms