RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 CTTNBP2Q8WZ74 1663 aa9.19□□□□□ -0.94
TMEM260-212ENST00000556810 RFC5P40937 340 aa9.18□□□□□ -0.94
TMEM260-212ENST00000556810 VPS8Q8N3P4 1428 aa9.18□□□□□ -0.94
TMEM260-212ENST00000556810 PCMTD1Q96MG8 357 aaPredicted RBP9.18□□□□□ -0.94
TMEM260-212ENST00000556810 NXF1Q9UBU9 619 aaKnown RBP9.18□□□□□ -0.94
TMEM260-212ENST00000556810 CCDC116Q8IYX3 515 aa9.17□□□□□ -0.94
TMEM260-212ENST00000556810 SLC10A4Q96EP9 437 aa9.17□□□□□ -0.94
TMEM260-212ENST00000556810 PCGF6Q9BYE7 350 aa9.17□□□□□ -0.94
TMEM260-212ENST00000556810 HMX1Q9NP08 348 aaPredicted RBP9.17□□□□□ -0.94
TMEM260-212ENST00000556810 PTK2Q05397 1052 aa9.16□□□□□ -0.94
TMEM260-212ENST00000556810 LCE2CQ5TA81 110 aa9.16□□□□□ -0.94
TMEM260-212ENST00000556810 ZBTB33Q86T24 672 aa9.16□□□□□ -0.94
TMEM260-212ENST00000556810 MEIOBQ8N635 442 aa9.16□□□□□ -0.94
TMEM260-212ENST00000556810 IL27Q8NEV9 243 aa9.16□□□□□ -0.94
TMEM260-212ENST00000556810 EPS8L1Q8TE68 723 aa9.16□□□□□ -0.94
TMEM260-212ENST00000556810 EMILIN1Q9Y6C2 1016 aa9.16□□□□□ -0.94
TMEM260-212ENST00000556810 ABCC10Q5T3U5 1492 aa9.15□□□□□ -0.94
TMEM260-212ENST00000556810 WIPF1O43516 503 aa9.15□□□□□ -0.94
TMEM260-212ENST00000556810 C6orf118Q5T5N4 469 aa9.15□□□□□ -0.94
TMEM260-212ENST00000556810 PNMA1Q8ND90 353 aa9.15□□□□□ -0.94
TMEM260-212ENST00000556810 SLC16A10Q8TF71 515 aa9.15□□□□□ -0.94
TMEM260-212ENST00000556810 CDV3Q9UKY7 258 aaKnown RBP9.15□□□□□ -0.94
TMEM260-212ENST00000556810 GPSM3Q9Y4H4 160 aa9.15□□□□□ -0.94
TMEM260-212ENST00000556810 UPP2O95045 317 aa9.14□□□□□ -0.95
TMEM260-212ENST00000556810 NPAS3Q8IXF0 933 aa9.14□□□□□ -0.95
TMEM260-212ENST00000556810 LINC00528Q8N1L1 170 aa9.14□□□□□ -0.95
TMEM260-212ENST00000556810 OCSTAMPQ9BR26 566 aa9.14□□□□□ -0.95
TMEM260-212ENST00000556810 EFCAB5A4FU69 1503 aa9.14□□□□□ -0.95
TMEM260-212ENST00000556810 BMP2P12643 396 aa9.13□□□□□ -0.95
TMEM260-212ENST00000556810 BRPF1P55201 1214 aaPredicted RBP9.13□□□□□ -0.95
TMEM260-212ENST00000556810 KCTD15Q96SI1 283 aaPredicted RBP9.13□□□□□ -0.95
TMEM260-212ENST00000556810 TSPOAP1O95153 1857 aa9.13□□□□□ -0.95
TMEM260-212ENST00000556810 SOBPA7XYQ1 873 aa9.12□□□□□ -0.95
TMEM260-212ENST00000556810 TMEM259Q4ZIN3 620 aa9.12□□□□□ -0.95
TMEM260-212ENST00000556810 PPP1R26Q5T8A7 1209 aaPredicted RBP9.12□□□□□ -0.95
TMEM260-212ENST00000556810 ADAM32Q8TC27 787 aa9.12□□□□□ -0.95
TMEM260-212ENST00000556810 ADCY10Q96PN6 1610 aa9.12□□□□□ -0.95
TMEM260-212ENST00000556810 MAPKBP1O60336 1514 aa9.11□□□□□ -0.95
TMEM260-212ENST00000556810 VEGFBP49765 207 aa9.11□□□□□ -0.95
TMEM260-212ENST00000556810 TSEN34Q9BSV6 310 aaKnown RBP9.11□□□□□ -0.95
TMEM260-212ENST00000556810 PGPEP1Q9NXJ5 209 aa9.11□□□□□ -0.95
TMEM260-212ENST00000556810 DIP2BQ9P265 1576 aa9.11□□□□□ -0.95
TMEM260-212ENST00000556810 H3BM21 787 aa9.1□□□□□ -0.95
TMEM260-212ENST00000556810 MAN1A2O60476 641 aa9.1□□□□□ -0.95
TMEM260-212ENST00000556810 RANGAP1P46060 587 aaPredicted RBP9.1□□□□□ -0.95
TMEM260-212ENST00000556810 DHX9Q08211 1270 aaKnown RBP9.1□□□□□ -0.95
TMEM260-212ENST00000556810 TRIM34Q9BYJ4 488 aa9.1□□□□□ -0.95
TMEM260-212ENST00000556810 ARHGAP35Q9NRY4 1499 aa9.09□□□□□ -0.95
TMEM260-212ENST00000556810 INSM1Q01101 510 aaPredicted RBP9.09□□□□□ -0.95
TMEM260-212ENST00000556810 INTS6LQ5JSJ4 861 aaKnown RBP9.09□□□□□ -0.95
TMEM260-212ENST00000556810 IRF7Q92985 503 aa9.09□□□□□ -0.95
TMEM260-212ENST00000556810 KDM6BO15054 1643 aa9.09□□□□□ -0.95
TMEM260-212ENST00000556810 TTBK1Q5TCY1 1321 aaPredicted RBP9.08□□□□□ -0.96
TMEM260-212ENST00000556810 FMN1Q68DA7 1419 aa9.08□□□□□ -0.96
TMEM260-212ENST00000556810 MAP3K1Q13233 1512 aa9.08□□□□□ -0.96
TMEM260-212ENST00000556810 KIAA0586Q9BVV6 1533 aa9.08□□□□□ -0.96
TMEM260-212ENST00000556810 SOS2Q07890 1332 aaPredicted RBP9.07□□□□□ -0.96
TMEM260-212ENST00000556810 CBLBQ13191 982 aa9.07□□□□□ -0.96
TMEM260-212ENST00000556810 NBPF20Q3BBV1 942 aa9.07□□□□□ -0.96
TMEM260-212ENST00000556810 Q6ZVU0 165 aa9.07□□□□□ -0.96
TMEM260-212ENST00000556810 GMPRP36959 345 aa9.06□□□□□ -0.96
TMEM260-212ENST00000556810 DZIP3Q86Y13 1208 aaKnown RBP9.06□□□□□ -0.96
TMEM260-212ENST00000556810 PTPRGP23470 1445 aa9.05□□□□□ -0.96
TMEM260-212ENST00000556810 IQGAP2Q13576 1575 aa9.05□□□□□ -0.96
TMEM260-212ENST00000556810 ZEB1P37275 1124 aaPredicted RBP9.05□□□□□ -0.96
TMEM260-212ENST00000556810 GJD4Q96KN9 370 aaPredicted RBP9.05□□□□□ -0.96
TMEM260-212ENST00000556810 DNMT3LQ9UJW3 386 aa9.05□□□□□ -0.96
TMEM260-212ENST00000556810 ERBB4Q15303 1308 aa9.05□□□□□ -0.96
TMEM260-212ENST00000556810 TTLL8A6PVC2 850 aa9.03□□□□□ -0.96
TMEM260-212ENST00000556810 RAB15P59190 212 aa9.03□□□□□ -0.96
TMEM260-212ENST00000556810 STK17AQ9UEE5 414 aa9.03□□□□□ -0.96
TMEM260-212ENST00000556810 SAMD9Q5K651 1589 aa9.03□□□□□ -0.96
TMEM260-212ENST00000556810 FYCO1Q9BQS8 1478 aa9.02□□□□□ -0.96
TMEM260-212ENST00000556810 SPINT1O43278 529 aa9.02□□□□□ -0.97
TMEM260-212ENST00000556810 TMPRSS4Q9NRS4 437 aa9.02□□□□□ -0.97
TMEM260-212ENST00000556810 ZBBXA8MT70 800 aa9.01□□□□□ -0.97
TMEM260-212ENST00000556810 ESPNB1AK53 854 aa9.01□□□□□ -0.97
TMEM260-212ENST00000556810 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.01□□□□□ -0.97
TMEM260-212ENST00000556810 AGBL1Q96MI9 1066 aa9.01□□□□□ -0.97
TMEM260-212ENST00000556810 UGGT2Q9NYU1 1516 aa9□□□□□ -0.97
TMEM260-212ENST00000556810 ASXL2Q76L83 1435 aa9□□□□□ -0.97
TMEM260-212ENST00000556810 CASKIN1Q8WXD9 1431 aa9□□□□□ -0.97
TMEM260-212ENST00000556810 ERVH48-1M5A8F1 160 aa9□□□□□ -0.97
TMEM260-212ENST00000556810 PPFIA3O75145 1194 aa9□□□□□ -0.97
TMEM260-212ENST00000556810 VSIG8P0DPA2 414 aa9□□□□□ -0.97
TMEM260-212ENST00000556810 RELBQ01201 579 aa9□□□□□ -0.97
TMEM260-212ENST00000556810 PPARGC1BQ86YN6 1023 aaKnown RBP9□□□□□ -0.97
TMEM260-212ENST00000556810 ZNF784Q8NCA9 323 aaPredicted RBP9□□□□□ -0.97
TMEM260-212ENST00000556810 BANK1Q8NDB2 785 aa9□□□□□ -0.97
TMEM260-212ENST00000556810 ABCC2Q92887 1545 aa9□□□□□ -0.97
TMEM260-212ENST00000556810 CARMIL2Q6F5E8 1435 aa8.99□□□□□ -0.97
TMEM260-212ENST00000556810 FIGNL2A6NMB9 653 aa8.99□□□□□ -0.97
TMEM260-212ENST00000556810 FBXO45P0C2W1 286 aa8.99□□□□□ -0.97
TMEM260-212ENST00000556810 TIMELESSQ9UNS1 1208 aa8.99□□□□□ -0.97
TMEM260-212ENST00000556810 PCDHB9Q9Y5E1 797 aa8.99□□□□□ -0.97
TMEM260-212ENST00000556810 PPRC1Q5VV67 1664 aaKnown RBP8.99□□□□□ -0.97
TMEM260-212ENST00000556810 TIAM1Q13009 1591 aa8.99□□□□□ -0.97
TMEM260-212ENST00000556810 PLB1Q6P1J6 1458 aa8.98□□□□□ -0.97
TMEM260-212ENST00000556810 SEPT12Q8IYM1 358 aa8.98□□□□□ -0.97
TMEM260-212ENST00000556810 GLI2P10070 1586 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms