RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 GIGYF1O75420 1035 aaPredicted RBP9.51□□□□□ -0.89
PRPF39-210ENST00000556718 RNF144AP50876 292 aaPredicted RBP9.5□□□□□ -0.89
PRPF39-210ENST00000556718 MARSP56192 900 aaKnown RBP9.49□□□□□ -0.89
PRPF39-210ENST00000556718 SRSF11Q05519 484 aaKnown RBP9.49□□□□□ -0.89
PRPF39-210ENST00000556718 SEPT12Q8IYM1 358 aa9.49□□□□□ -0.89
PRPF39-210ENST00000556718 PCDHB9Q9Y5E1 797 aa9.49□□□□□ -0.89
PRPF39-210ENST00000556718 ATP5J2-PTCD1G3V325 749 aa9.48□□□□□ -0.89
PRPF39-210ENST00000556718 GPR25O00155 361 aa9.48□□□□□ -0.89
PRPF39-210ENST00000556718 CELA2BP08218 269 aaPredicted RBP9.48□□□□□ -0.89
PRPF39-210ENST00000556718 ZNF837Q96EG3 531 aaPredicted RBP9.48□□□□□ -0.89
PRPF39-210ENST00000556718 ZBBXA8MT70 800 aa9.47□□□□□ -0.89
PRPF39-210ENST00000556718 FBXO45P0C2W1 286 aa9.47□□□□□ -0.89
PRPF39-210ENST00000556718 GJD4Q96KN9 370 aaPredicted RBP9.47□□□□□ -0.89
PRPF39-210ENST00000556718 A0A1W2PRU2 124 aa9.46□□□□□ -0.9
PRPF39-210ENST00000556718 MEN1O00255 615 aa9.46□□□□□ -0.9
PRPF39-210ENST00000556718 GPAT2Q6NUI2 795 aa9.46□□□□□ -0.9
PRPF39-210ENST00000556718 DNMT3AQ9Y6K1 912 aaPredicted RBP9.46□□□□□ -0.9
PRPF39-210ENST00000556718 DBN1Q16643 649 aa9.45□□□□□ -0.9
PRPF39-210ENST00000556718 POU4F2Q12837 409 aa9.44□□□□□ -0.9
PRPF39-210ENST00000556718 TRIM22Q8IYM9 498 aa9.44□□□□□ -0.9
PRPF39-210ENST00000556718 SCTRP47872 440 aa9.43□□□□□ -0.9
PRPF39-210ENST00000556718 ERVK-9P63128 1117 aa9.43□□□□□ -0.9
PRPF39-210ENST00000556718 MAP3K10Q02779 954 aa9.43□□□□□ -0.9
PRPF39-210ENST00000556718 TMEM259Q4ZIN3 620 aa9.43□□□□□ -0.9
PRPF39-210ENST00000556718 RIPOR1Q6ZS17 1223 aa9.43□□□□□ -0.9
PRPF39-210ENST00000556718 SCARF2Q96GP6 870 aaPredicted RBP9.43□□□□□ -0.9
PRPF39-210ENST00000556718 PCMTD1Q96MG8 357 aaPredicted RBP9.43□□□□□ -0.9
PRPF39-210ENST00000556718 GPC1P35052 558 aa9.42□□□□□ -0.9
PRPF39-210ENST00000556718 CC2D2BQ6DHV5 1058 aa9.42□□□□□ -0.9
PRPF39-210ENST00000556718 KANK3Q6NY19 840 aa9.42□□□□□ -0.9
PRPF39-210ENST00000556718 MBIPQ9NS73 344 aa9.42□□□□□ -0.9
PRPF39-210ENST00000556718 IGF1RP08069 1367 aa9.41□□□□□ -0.9
PRPF39-210ENST00000556718 GTPBP3Q969Y2 492 aaKnown RBP9.41□□□□□ -0.9
PRPF39-210ENST00000556718 GAS2L1Q99501 681 aaPredicted RBP9.41□□□□□ -0.9
PRPF39-210ENST00000556718 GOPCQ9HD26 462 aa9.41□□□□□ -0.9
PRPF39-210ENST00000556718 DYRK1BQ9Y463 629 aa9.4□□□□□ -0.9
PRPF39-210ENST00000556718 CNTNAP5Q8WYK1 1306 aa9.39□□□□□ -0.91
PRPF39-210ENST00000556718 GPR37L1O60883 481 aa9.39□□□□□ -0.91
PRPF39-210ENST00000556718 SLC27A3Q5K4L6 730 aa9.39□□□□□ -0.91
PRPF39-210ENST00000556718 GMCL1Q96IK5 515 aa9.39□□□□□ -0.91
PRPF39-210ENST00000556718 GRIP2Q9C0E4 1043 aa9.39□□□□□ -0.91
PRPF39-210ENST00000556718 CLN3Q13286 438 aa9.38□□□□□ -0.91
PRPF39-210ENST00000556718 NBPF10Q6P3W6 841 aaKnown RBP9.38□□□□□ -0.91
PRPF39-210ENST00000556718 NBPF15Q8N660 670 aa9.38□□□□□ -0.91
PRPF39-210ENST00000556718 ACDQ96AP0 544 aa9.38□□□□□ -0.91
PRPF39-210ENST00000556718 NLRP3Q96P20 1036 aa9.38□□□□□ -0.91
PRPF39-210ENST00000556718 OSBPL3Q9H4L5 887 aa9.38□□□□□ -0.91
PRPF39-210ENST00000556718 FOXR1Q6PIV2 292 aa9.37□□□□□ -0.91
PRPF39-210ENST00000556718 IL27Q8NEV9 243 aa9.37□□□□□ -0.91
PRPF39-210ENST00000556718 ARHGEF10LQ9HCE6 1279 aa9.37□□□□□ -0.91
PRPF39-210ENST00000556718 RAB6BQ9NRW1 208 aa9.37□□□□□ -0.91
PRPF39-210ENST00000556718 PCDHB11Q9Y5F2 797 aa9.37□□□□□ -0.91
PRPF39-210ENST00000556718 BCRP11274 1271 aa9.36□□□□□ -0.91
PRPF39-210ENST00000556718 NR1H3Q13133 447 aa9.36□□□□□ -0.91
PRPF39-210ENST00000556718 RNF20Q5VTR2 975 aa9.36□□□□□ -0.91
PRPF39-210ENST00000556718 CYP2U1Q7Z449 544 aa9.36□□□□□ -0.91
PRPF39-210ENST00000556718 TRIM52Q96A61 297 aa9.36□□□□□ -0.91
PRPF39-210ENST00000556718 ENAMQ9NRM1 1142 aa9.36□□□□□ -0.91
PRPF39-210ENST00000556718 SPATA31C2B4DYI2 1134 aa9.35□□□□□ -0.91
PRPF39-210ENST00000556718 H7C1W4 665 aa9.35□□□□□ -0.91
PRPF39-210ENST00000556718 TRAK2O60296 914 aa9.35□□□□□ -0.91
PRPF39-210ENST00000556718 IGHA1P01876 353 aa9.35□□□□□ -0.91
PRPF39-210ENST00000556718 ITGB2P05107 769 aa9.34□□□□□ -0.91
PRPF39-210ENST00000556718 THBS1P07996 1170 aa9.34□□□□□ -0.91
PRPF39-210ENST00000556718 FOXK2Q01167 660 aa9.34□□□□□ -0.91
PRPF39-210ENST00000556718 CCDC125Q86Z20 511 aa9.34□□□□□ -0.91
PRPF39-210ENST00000556718 NEDD1Q8NHV4 660 aa9.34□□□□□ -0.91
PRPF39-210ENST00000556718 TIMMDC1Q9NPL8 285 aa9.34□□□□□ -0.91
PRPF39-210ENST00000556718 NEUROD2Q15784 382 aa9.33□□□□□ -0.92
PRPF39-210ENST00000556718 DCAF5Q96JK2 942 aa9.33□□□□□ -0.92
PRPF39-210ENST00000556718 TRERF1Q96PN7 1200 aa9.33□□□□□ -0.92
PRPF39-210ENST00000556718 WASLO00401 505 aaPredicted RBP9.32□□□□□ -0.92
PRPF39-210ENST00000556718 MX2P20592 715 aa9.32□□□□□ -0.92
PRPF39-210ENST00000556718 PLA2G4EQ3MJ16 856 aa9.32□□□□□ -0.92
PRPF39-210ENST00000556718 TAS1R3Q7RTX0 852 aa9.32□□□□□ -0.92
PRPF39-210ENST00000556718 MTMR14Q8NCE2 650 aa9.32□□□□□ -0.92
PRPF39-210ENST00000556718 NUCKS1Q9H1E3 243 aaKnown RBP9.32□□□□□ -0.92
PRPF39-210ENST00000556718 IL2RAP01589 272 aa9.31□□□□□ -0.92
PRPF39-210ENST00000556718 F11P03951 625 aa9.31□□□□□ -0.92
PRPF39-210ENST00000556718 CDCA7Q9BWT1 371 aaPredicted RBP9.31□□□□□ -0.92
PRPF39-210ENST00000556718 GPAMQ9HCL2 828 aa9.31□□□□□ -0.92
PRPF39-210ENST00000556718 PHF20L1A8MW92 1017 aa9.3□□□□□ -0.92
PRPF39-210ENST00000556718 PRKCSHP14314 528 aaPredicted RBP9.3□□□□□ -0.92
PRPF39-210ENST00000556718 PHKA2P46019 1235 aa9.3□□□□□ -0.92
PRPF39-210ENST00000556718 MCCD1P59942 119 aaPredicted RBP9.3□□□□□ -0.92
PRPF39-210ENST00000556718 WDR44Q5JSH3 913 aa9.3□□□□□ -0.92
PRPF39-210ENST00000556718 BEND7Q8N7W2 519 aaPredicted RBP9.3□□□□□ -0.92
PRPF39-210ENST00000556718 CENPCQ03188 943 aa9.29□□□□□ -0.92
PRPF39-210ENST00000556718 CNKSR1Q969H4 720 aa9.29□□□□□ -0.92
PRPF39-210ENST00000556718 CCDC85AQ96PX6 553 aaPredicted RBP9.29□□□□□ -0.92
PRPF39-210ENST00000556718 SNRKQ9NRH2 765 aa9.29□□□□□ -0.92
PRPF39-210ENST00000556718 TPRNQ4KMQ1 711 aa9.28□□□□□ -0.92
PRPF39-210ENST00000556718 SPOCK3Q9BQ16 436 aa9.28□□□□□ -0.92
PRPF39-210ENST00000556718 ESYT1Q9BSJ8 1104 aa9.28□□□□□ -0.92
PRPF39-210ENST00000556718 HRH3Q9Y5N1 445 aa9.28□□□□□ -0.92
PRPF39-210ENST00000556718 MSTNO14793 375 aa9.27□□□□□ -0.93
PRPF39-210ENST00000556718 OIP5O43482 229 aa9.27□□□□□ -0.93
PRPF39-210ENST00000556718 GNRH1P01148 92 aa9.27□□□□□ -0.93
PRPF39-210ENST00000556718 ESF1Q9H501 851 aaKnown RBP9.27□□□□□ -0.93
PRPF39-210ENST00000556718 ZNF330Q9Y3S2 320 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms