RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 EIF3AQ14152 1382 aaKnown RBP6.48□□□□□ -1.37
ATXN3-242ENST00000556644 WASLO00401 505 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-242ENST00000556644 CFAP70Q5T0N1 1121 aa6.48□□□□□ -1.37
ATXN3-242ENST00000556644 RNF216Q9NWF9 866 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-242ENST00000556644 RNF181Q9P0P0 153 aa6.48□□□□□ -1.37
ATXN3-242ENST00000556644 CCNL1Q9UK58 526 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-242ENST00000556644 ABCC6O95255 1503 aa6.48□□□□□ -1.37
ATXN3-242ENST00000556644 PPIP5K1Q6PFW1 1433 aa6.48□□□□□ -1.37
ATXN3-242ENST00000556644 TNRC6CQ9HCJ0 1690 aaKnown RBP6.48□□□□□ -1.37
ATXN3-242ENST00000556644 TNRC18O15417 2968 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-242ENST00000556644 ROCK1Q13464 1354 aa6.47□□□□□ -1.37
ATXN3-242ENST00000556644 A0A0G2JLW4 131 aa6.47□□□□□ -1.37
ATXN3-242ENST00000556644 SOX12O15370 315 aa6.47□□□□□ -1.37
ATXN3-242ENST00000556644 NLRP13Q86W25 1043 aa6.47□□□□□ -1.37
ATXN3-242ENST00000556644 NUDT16Q96DE0 195 aaKnown RBP6.47□□□□□ -1.37
ATXN3-242ENST00000556644 CARD10Q9BWT7 1032 aa6.47□□□□□ -1.37
ATXN3-242ENST00000556644 ACEP12821 1306 aa6.47□□□□□ -1.37
ATXN3-242ENST00000556644 ERBB3P21860 1342 aa6.47□□□□□ -1.37
ATXN3-242ENST00000556644 CNTNAP1P78357 1384 aa6.46□□□□□ -1.37
ATXN3-242ENST00000556644 FCHSD2O94868 740 aa6.46□□□□□ -1.38
ATXN3-242ENST00000556644 PHF14O94880 888 aa6.46□□□□□ -1.38
ATXN3-242ENST00000556644 VEGFBP49765 207 aa6.46□□□□□ -1.38
ATXN3-242ENST00000556644 AMIGO3Q86WK7 504 aa6.46□□□□□ -1.38
ATXN3-242ENST00000556644 CREBZFQ9NS37 354 aa6.46□□□□□ -1.38
ATXN3-242ENST00000556644 WBP1LQ9NX94 342 aa6.46□□□□□ -1.38
ATXN3-242ENST00000556644 TRAK1Q9UPV9 953 aa6.46□□□□□ -1.38
ATXN3-242ENST00000556644 COL18A1P39060 1754 aa6.46□□□□□ -1.38
ATXN3-242ENST00000556644 N4BP2Q86UW6 1770 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-242ENST00000556644 ITSN1Q15811 1721 aa6.45□□□□□ -1.38
ATXN3-242ENST00000556644 APLP2Q06481 763 aa6.45□□□□□ -1.38
ATXN3-242ENST00000556644 PRPF38BQ5VTL8 546 aaKnown RBP6.45□□□□□ -1.38
ATXN3-242ENST00000556644 C14orf93Q9H972 538 aaKnown RBP6.45□□□□□ -1.38
ATXN3-242ENST00000556644 RGPD5Q99666 1765 aa6.44□□□□□ -1.38
ATXN3-242ENST00000556644 CPSF1Q10570 1443 aaKnown RBP6.44□□□□□ -1.38
ATXN3-242ENST00000556644 DPEP1P16444 411 aa6.44□□□□□ -1.38
ATXN3-242ENST00000556644 PRIM1P49642 420 aaKnown RBP6.44□□□□□ -1.38
ATXN3-242ENST00000556644 SOX10P56693 466 aa6.44□□□□□ -1.38
ATXN3-242ENST00000556644 NLRP6P59044 892 aa6.44□□□□□ -1.38
ATXN3-242ENST00000556644 DDX54Q8TDD1 881 aaKnown RBP6.44□□□□□ -1.38
ATXN3-242ENST00000556644 TSKSQ9UJT2 592 aa6.44□□□□□ -1.38
ATXN3-242ENST00000556644 QRICH2Q9H0J4 1663 aa6.44□□□□□ -1.38
ATXN3-242ENST00000556644 KIAA1551Q9HCM1 1747 aa6.44□□□□□ -1.38
ATXN3-242ENST00000556644 POLR3AO14802 1390 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-242ENST00000556644 CCDC7Q96M83 1385 aa6.44□□□□□ -1.38
ATXN3-242ENST00000556644 SPATA31E1Q6ZUB1 1445 aa6.43□□□□□ -1.38
ATXN3-242ENST00000556644 USP54Q70EL1 1684 aa6.43□□□□□ -1.38
ATXN3-242ENST00000556644 LY75O60449 1722 aa6.43□□□□□ -1.38
ATXN3-242ENST00000556644 VEGFAP15692 232 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-242ENST00000556644 MCOLN1Q9GZU1 580 aa6.43□□□□□ -1.38
ATXN3-242ENST00000556644 NLRP2Q9NX02 1062 aa6.43□□□□□ -1.38
ATXN3-242ENST00000556644 NSD2O96028 1365 aa6.43□□□□□ -1.38
ATXN3-242ENST00000556644 SLIT3O75094 1523 aa6.42□□□□□ -1.38
ATXN3-242ENST00000556644 DLL1O00548 723 aa6.42□□□□□ -1.38
ATXN3-242ENST00000556644 POTEIP0CG38 1075 aa6.42□□□□□ -1.38
ATXN3-242ENST00000556644 POTEJP0CG39 1038 aa6.42□□□□□ -1.38
ATXN3-242ENST00000556644 IL2RBP14784 551 aa6.42□□□□□ -1.38
ATXN3-242ENST00000556644 RASSF7Q02833 373 aa6.42□□□□□ -1.38
ATXN3-242ENST00000556644 C5P01031 1676 aa6.42□□□□□ -1.38
ATXN3-242ENST00000556644 DOT1LQ8TEK3 1739 aa6.42□□□□□ -1.38
ATXN3-242ENST00000556644 TOGARAM1Q9Y4F4 1720 aa6.42□□□□□ -1.38
ATXN3-242ENST00000556644 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.41□□□□□ -1.38
ATXN3-242ENST00000556644 MMP10P09238 476 aa6.41□□□□□ -1.38
ATXN3-242ENST00000556644 CHRDL2Q6WN34 429 aa6.41□□□□□ -1.38
ATXN3-242ENST00000556644 CHADLQ6NUI6 762 aa6.4□□□□□ -1.38
ATXN3-242ENST00000556644 ARHGEF25Q86VW2 580 aa6.4□□□□□ -1.38
ATXN3-242ENST00000556644 FLAD1Q8NFF5 587 aa6.4□□□□□ -1.38
ATXN3-242ENST00000556644 AK7Q96M32 723 aa6.4□□□□□ -1.38
ATXN3-242ENST00000556644 SLC4A1APQ9BWU0 796 aaKnown RBP6.4□□□□□ -1.38
ATXN3-242ENST00000556644 CDK19Q9BWU1 502 aa6.4□□□□□ -1.38
ATXN3-242ENST00000556644 SPINK5Q9NQ38 1064 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-242ENST00000556644 ZNF219Q9P2Y4 722 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-242ENST00000556644 ANKRD36BQ8N2N9 1353 aa6.4□□□□□ -1.39
ATXN3-242ENST00000556644 ADGRB1O14514 1584 aa6.4□□□□□ -1.39
ATXN3-242ENST00000556644 VIRMAQ69YN4 1812 aaKnown RBP6.39□□□□□ -1.39
ATXN3-242ENST00000556644 GLTPD2A6NH11 291 aa6.39□□□□□ -1.39
ATXN3-242ENST00000556644 POTECB2RU33 542 aa6.39□□□□□ -1.39
ATXN3-242ENST00000556644 TGFB2P61812 414 aa6.39□□□□□ -1.39
ATXN3-242ENST00000556644 GRM1Q13255 1194 aa6.39□□□□□ -1.39
ATXN3-242ENST00000556644 USP47Q96K76 1375 aa6.39□□□□□ -1.39
ATXN3-242ENST00000556644 PLEKHG3A1L390 1219 aa6.38□□□□□ -1.39
ATXN3-242ENST00000556644 DGKZQ13574 1117 aa6.38□□□□□ -1.39
ATXN3-242ENST00000556644 HABP4Q5JVS0 413 aaKnown RBP6.38□□□□□ -1.39
ATXN3-242ENST00000556644 DCAF5Q96JK2 942 aa6.38□□□□□ -1.39
ATXN3-242ENST00000556644 CCDC61Q9Y6R9 512 aa6.38□□□□□ -1.39
ATXN3-242ENST00000556644 KIF13BQ9NQT8 1826 aa6.38□□□□□ -1.39
ATXN3-242ENST00000556644 SBF1O95248 1867 aa6.37□□□□□ -1.39
ATXN3-242ENST00000556644 BRCA1P38398 1863 aaKnown RBP6.37□□□□□ -1.39
ATXN3-242ENST00000556644 ARFGEF1Q9Y6D6 1849 aa6.37□□□□□ -1.39
ATXN3-242ENST00000556644 C4BP0C0L5 1744 aa6.37□□□□□ -1.39
ATXN3-242ENST00000556644 WDR33Q9C0J8 1336 aaKnown RBP6.37□□□□□ -1.39
ATXN3-242ENST00000556644 TMEM88BA6NKF7 163 aa6.37□□□□□ -1.39
ATXN3-242ENST00000556644 KCNA3P22001 575 aa6.37□□□□□ -1.39
ATXN3-242ENST00000556644 MAP2K1Q02750 393 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-242ENST00000556644 DALRD3Q5D0E6 543 aaKnown RBP6.37□□□□□ -1.39
ATXN3-242ENST00000556644 CNKSR2Q8WXI2 1034 aa6.37□□□□□ -1.39
ATXN3-242ENST00000556644 TIAM2Q8IVF5 1701 aa6.36□□□□□ -1.39
ATXN3-242ENST00000556644 PALLDQ8WX93 1383 aa6.36□□□□□ -1.39
ATXN3-242ENST00000556644 PASKQ96RG2 1323 aa6.36□□□□□ -1.39
ATXN3-242ENST00000556644 CHRNA5P30532 468 aa6.36□□□□□ -1.39
ATXN3-242ENST00000556644 PAXIP1Q6ZW49 1069 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms