RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 RGPD1P0DJD0 1748 aa10.85□□□□□ -0.67
HNRNPC-226ENST00000556628 BAG6P46379 1132 aa10.85□□□□□ -0.67
HNRNPC-226ENST00000556628 PSEN1P49768 467 aa10.85□□□□□ -0.67
HNRNPC-226ENST00000556628 KCNH5Q8NCM2 988 aa10.85□□□□□ -0.67
HNRNPC-226ENST00000556628 TMC1Q8TDI8 760 aa10.85□□□□□ -0.67
HNRNPC-226ENST00000556628 L3MBTL3Q96JM7 780 aaPredicted RBP10.85□□□□□ -0.67
HNRNPC-226ENST00000556628 SLIT3O75094 1523 aa10.84□□□□□ -0.67
HNRNPC-226ENST00000556628 PDE3BQ13370 1112 aa10.84□□□□□ -0.67
HNRNPC-226ENST00000556628 LARP1Q6PKG0 1096 aaKnown RBP10.84□□□□□ -0.67
HNRNPC-226ENST00000556628 C3orf67Q6ZVT6 689 aa10.84□□□□□ -0.67
HNRNPC-226ENST00000556628 HDGFL2Q7Z4V5 671 aaPredicted RBP10.84□□□□□ -0.67
HNRNPC-226ENST00000556628 THRAP3Q9Y2W1 955 aaKnown RBP10.84□□□□□ -0.67
HNRNPC-226ENST00000556628 MON2Q7Z3U7 1717 aa10.84□□□□□ -0.67
HNRNPC-226ENST00000556628 CPSF1Q10570 1443 aaKnown RBP10.84□□□□□ -0.67
HNRNPC-226ENST00000556628 BARGINQ6ZT62 677 aa10.83□□□□□ -0.68
HNRNPC-226ENST00000556628 DEFB132Q7Z7B7 95 aa10.83□□□□□ -0.68
HNRNPC-226ENST00000556628 TCP11L2Q8N4U5 519 aa10.83□□□□□ -0.68
HNRNPC-226ENST00000556628 COL5A2P05997 1499 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-226ENST00000556628 AATKQ6ZMQ8 1374 aa10.82□□□□□ -0.68
HNRNPC-226ENST00000556628 SOX12O15370 315 aa10.82□□□□□ -0.68
HNRNPC-226ENST00000556628 FAM182BQ5T319 152 aa10.82□□□□□ -0.68
HNRNPC-226ENST00000556628 TERF2IPQ9NYB0 399 aa10.82□□□□□ -0.68
HNRNPC-226ENST00000556628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.82□□□□□ -0.684e-12■■■□□ 16.5
HNRNPC-226ENST00000556628 CRB1P82279 1406 aa10.82□□□□□ -0.68
HNRNPC-226ENST00000556628 FAM196AQ6ZSG2 479 aa10.81□□□□□ -0.68
HNRNPC-226ENST00000556628 TOM1L2Q6ZVM7 507 aa10.81□□□□□ -0.68
HNRNPC-226ENST00000556628 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.81□□□□□ -0.68
HNRNPC-226ENST00000556628 PUS7Q96PZ0 661 aaKnown RBP10.81□□□□□ -0.68
HNRNPC-226ENST00000556628 ST20-MTHFSA0A0A6YYL1 179 aa10.8□□□□□ -0.68
HNRNPC-226ENST00000556628 C11orf95C9JLR9 678 aaPredicted RBP10.8□□□□□ -0.68
HNRNPC-226ENST00000556628 CSB-PGBD3P0DP91 1061 aa10.8□□□□□ -0.68
HNRNPC-226ENST00000556628 PDAP1Q13442 181 aaKnown RBP10.8□□□□□ -0.68
HNRNPC-226ENST00000556628 RGPD5Q99666 1765 aa10.8□□□□□ -0.68
HNRNPC-226ENST00000556628 PARP4Q9UKK3 1724 aaKnown RBP10.79□□□□□ -0.68
HNRNPC-226ENST00000556628 ARHGEF25Q86VW2 580 aa10.79□□□□□ -0.68
HNRNPC-226ENST00000556628 SLC12A5Q9H2X9 1139 aa10.79□□□□□ -0.68
HNRNPC-226ENST00000556628 COL18A1P39060 1754 aa10.79□□□□□ -0.68
HNRNPC-226ENST00000556628 NINLQ9Y2I6 1382 aa10.78□□□□□ -0.68
HNRNPC-226ENST00000556628 TNS1Q9HBL0 1735 aaKnown RBP10.78□□□□□ -0.68
HNRNPC-226ENST00000556628 EDC4Q6P2E9 1401 aaKnown RBP10.78□□□□□ -0.68
HNRNPC-226ENST00000556628 ECM2O94769 699 aaPredicted RBP10.78□□□□□ -0.68
HNRNPC-226ENST00000556628 TRIM37O94972 964 aa10.78□□□□□ -0.68
HNRNPC-226ENST00000556628 EN1Q05925 392 aaPredicted RBP10.78□□□□□ -0.68
HNRNPC-226ENST00000556628 PCGF6Q9BYE7 350 aa10.78□□□□□ -0.68
HNRNPC-226ENST00000556628 CIZ1Q9ULV3 898 aaPredicted RBP10.78□□□□□ -0.68
HNRNPC-226ENST00000556628 USP54Q70EL1 1684 aa10.78□□□□□ -0.68
HNRNPC-226ENST00000556628 WDR17Q8IZU2 1322 aa10.78□□□□□ -0.68
HNRNPC-226ENST00000556628 USP31Q70CQ4 1352 aa10.77□□□□□ -0.68
HNRNPC-226ENST00000556628 CD163L1Q9NR16 1453 aa10.77□□□□□ -0.69
HNRNPC-226ENST00000556628 APBA3O96018 575 aa10.77□□□□□ -0.69
HNRNPC-226ENST00000556628 TIMELESSQ9UNS1 1208 aa10.77□□□□□ -0.69
HNRNPC-226ENST00000556628 ABCC6O95255 1503 aa10.77□□□□□ -0.69
HNRNPC-226ENST00000556628 CLSPNQ9HAW4 1339 aa10.77□□□□□ -0.69
HNRNPC-226ENST00000556628 WNK3Q9BYP7 1800 aa10.77□□□□□ -0.69
HNRNPC-226ENST00000556628 A0A1W2PP64 1363 aa10.77□□□□□ -0.69
HNRNPC-226ENST00000556628 LTN1O94822 1766 aa10.76□□□□□ -0.69
HNRNPC-226ENST00000556628 NFAT5O94916 1531 aa10.76□□□□□ -0.69
HNRNPC-226ENST00000556628 TMF1P82094 1093 aa10.76□□□□□ -0.69
HNRNPC-226ENST00000556628 DDB1Q16531 1140 aa10.76□□□□□ -0.69
HNRNPC-226ENST00000556628 NME9Q86XW9 330 aa10.76□□□□□ -0.69
HNRNPC-226ENST00000556628 MARVELD3Q96A59 401 aa10.76□□□□□ -0.69
HNRNPC-226ENST00000556628 TESK2Q96S53 571 aa10.76□□□□□ -0.69
HNRNPC-226ENST00000556628 CDCA7Q9BWT1 371 aaPredicted RBP10.76□□□□□ -0.69
HNRNPC-226ENST00000556628 AXIN2Q9Y2T1 843 aa10.76□□□□□ -0.69
HNRNPC-226ENST00000556628 USP47Q96K76 1375 aa10.76□□□□□ -0.69
HNRNPC-226ENST00000556628 DISP2A7MBM2 1401 aa10.75□□□□□ -0.69
HNRNPC-226ENST00000556628 EP400Q96L91 3159 aa10.75□□□□□ -0.69
HNRNPC-226ENST00000556628 EZH2Q15910 746 aaKnown RBP10.75□□□□□ -0.69
HNRNPC-226ENST00000556628 CDCA8Q53HL2 280 aa10.75□□□□□ -0.69
HNRNPC-226ENST00000556628 CARD10Q9BWT7 1032 aa10.75□□□□□ -0.69
HNRNPC-226ENST00000556628 LRRC37A3O60309 1634 aa10.75□□□□□ -0.69
HNRNPC-226ENST00000556628 CCDC7Q96M83 1385 aa10.75□□□□□ -0.69
HNRNPC-226ENST00000556628 OVOS2A0A0G2JMS6 1433 aa10.75□□□□□ -0.69
HNRNPC-226ENST00000556628 OVOS2A0A0J9YW53 1432 aa10.75□□□□□ -0.69
HNRNPC-226ENST00000556628 OVOS2Q6IE36 1432 aa10.75□□□□□ -0.69
HNRNPC-226ENST00000556628 PARD3Q8TEW0 1356 aa10.74□□□□□ -0.69
HNRNPC-226ENST00000556628 EXOC5O00471 708 aa10.73□□□□□ -0.69
HNRNPC-226ENST00000556628 COG3Q96JB2 828 aa10.73□□□□□ -0.69
HNRNPC-226ENST00000556628 PSDA5PKW4 1024 aaPredicted RBP10.72□□□□□ -0.69
HNRNPC-226ENST00000556628 CAMKK2Q96RR4 588 aa10.72□□□□□ -0.69
HNRNPC-226ENST00000556628 NLRP2Q9NX02 1062 aa10.72□□□□□ -0.69
HNRNPC-226ENST00000556628 ANKRD36BQ8N2N9 1353 aa10.72□□□□□ -0.69
HNRNPC-226ENST00000556628 ERBB3P21860 1342 aa10.71□□□□□ -0.69
HNRNPC-226ENST00000556628 NBPF14Q5TI25 921 aa10.71□□□□□ -0.69
HNRNPC-226ENST00000556628 SBF2Q86WG5 1849 aa10.71□□□□□ -0.69
HNRNPC-226ENST00000556628 ANKRD24Q8TF21 1146 aa10.71□□□□□ -0.69
HNRNPC-226ENST00000556628 RREB1Q92766 1687 aa10.71□□□□□ -0.69
HNRNPC-226ENST00000556628 PEAK1Q9H792 1746 aa10.7□□□□□ -0.7
HNRNPC-226ENST00000556628 FAM208AQ9UK61 1670 aaKnown RBP10.7□□□□□ -0.7
HNRNPC-226ENST00000556628 G3V3G9 751 aa10.7□□□□□ -0.7
HNRNPC-226ENST00000556628 RGL2O15211 777 aa10.7□□□□□ -0.7
HNRNPC-226ENST00000556628 AMPHP49418 695 aa10.7□□□□□ -0.7
HNRNPC-226ENST00000556628 EMP3P54852 163 aa10.7□□□□□ -0.7
HNRNPC-226ENST00000556628 R3HDM1Q15032 1099 aaKnown RBP10.7□□□□□ -0.7
HNRNPC-226ENST00000556628 CCER1Q8TC90 406 aaPredicted RBP10.7□□□□□ -0.7
HNRNPC-226ENST00000556628 IL2RBP14784 551 aa10.69□□□□□ -0.7
HNRNPC-226ENST00000556628 IP6K1Q92551 441 aa10.69□□□□□ -0.7
HNRNPC-226ENST00000556628 LRP5O75197 1615 aa10.69□□□□□ -0.7
HNRNPC-226ENST00000556628 TNS2Q63HR2 1409 aa10.68□□□□□ -0.7
HNRNPC-226ENST00000556628 KIF20BQ96Q89 1820 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms