RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 U2AF1Q01081 240 aaKnown RBP eCLIP32.18■■■□□ 2.744e-12■■□□□ 12.7
RCCD1-206ENST00000556618 CCDC184Q52MB2 194 aa32.18■■■□□ 2.74
RCCD1-206ENST00000556618 PDE3BQ13370 1112 aa32.16■■■□□ 2.74
RCCD1-206ENST00000556618 KRT27Q7Z3Y8 459 aa32.15■■■□□ 2.74
RCCD1-206ENST00000556618 TNS2Q63HR2 1409 aa32.15■■■□□ 2.74
RCCD1-206ENST00000556618 ZCRB1Q8TBF4 217 aaKnown RBP32.15■■■□□ 2.74
RCCD1-206ENST00000556618 EP400Q96L91 3159 aa32.14■■■□□ 2.74
RCCD1-206ENST00000556618 PKD1L3Q7Z443 1732 aa32.13■■■□□ 2.73
RCCD1-206ENST00000556618 SHANK3Q9BYB0 1731 aa32.13■■■□□ 2.73
RCCD1-206ENST00000556618 PLEKHG2Q9H7P9 1386 aa32.12■■■□□ 2.73
RCCD1-206ENST00000556618 RSPH6AQ9H0K4 717 aa32.11■■■□□ 2.73
RCCD1-206ENST00000556618 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.11■■■□□ 2.731e-8■■□□□ 11.4
RCCD1-206ENST00000556618 FCHSD2O94868 740 aa32.1■■■□□ 2.73
RCCD1-206ENST00000556618 MRS2Q9HD23 443 aa32.1■■■□□ 2.73
RCCD1-206ENST00000556618 MARCH10Q8NA82 808 aaPredicted RBP32.09■■■□□ 2.73
RCCD1-206ENST00000556618 SPG7Q9UQ90 795 aa32.08■■■□□ 2.73
RCCD1-206ENST00000556618 FAM182BQ5T319 152 aa32.07■■■□□ 2.72
RCCD1-206ENST00000556618 DDX54Q8TDD1 881 aaKnown RBP32.07■■■□□ 2.72
RCCD1-206ENST00000556618 WDR43Q15061 677 aaKnown RBP eCLIP32.07■■■□□ 2.72
RCCD1-206ENST00000556618 PLEKHO1Q53GL0 409 aaPredicted RBP32.07■■■□□ 2.72
RCCD1-206ENST00000556618 PRKAR2BP31323 418 aa32.06■■■□□ 2.72
RCCD1-206ENST00000556618 AMOTQ4VCS5 1084 aa32.06■■■□□ 2.72
RCCD1-206ENST00000556618 KAT6BQ8WYB5 2073 aa32.04■■■□□ 2.72
RCCD1-206ENST00000556618 PCDH11XQ9BZA7 1347 aa32.04■■■□□ 2.72
RCCD1-206ENST00000556618 PCDH11YQ9BZA8 1340 aa32.04■■■□□ 2.72
RCCD1-206ENST00000556618 MIER1Q8N108 512 aa32.03■■■□□ 2.72
RCCD1-206ENST00000556618 CYP27B1O15528 508 aa32.02■■■□□ 2.72
RCCD1-206ENST00000556618 ADAMTS8Q9UP79 889 aa32.02■■■□□ 2.72
RCCD1-206ENST00000556618 PNISRQ8TF01 805 aaKnown RBP32.02■■■□□ 2.72
RCCD1-206ENST00000556618 PHACTR3Q96KR7 559 aa32■■■□□ 2.71
RCCD1-206ENST00000556618 CCER2I3L3R5 266 aa31.99■■■□□ 2.71
RCCD1-206ENST00000556618 FAM196AQ6ZSG2 479 aa31.99■■■□□ 2.71
RCCD1-206ENST00000556618 PNNQ9H307 717 aaKnown RBP31.99■■■□□ 2.71
RCCD1-206ENST00000556618 MTHFSDQ2M296 383 aaKnown RBP31.98■■■□□ 2.71
RCCD1-206ENST00000556618 ZNF530Q6P9A1 599 aaPredicted RBP31.98■■■□□ 2.71
RCCD1-206ENST00000556618 PLEKHF1Q96S99 279 aa31.98■■■□□ 2.71
RCCD1-206ENST00000556618 IFNL2Q8IZJ0 200 aa31.98■■■□□ 2.71
RCCD1-206ENST00000556618 SBF2Q86WG5 1849 aa31.97■■■□□ 2.71
RCCD1-206ENST00000556618 PHKG2P15735 406 aa31.97■■■□□ 2.71
RCCD1-206ENST00000556618 BCL9O00512 1426 aa31.96■■■□□ 2.71
RCCD1-206ENST00000556618 NKX1-1Q15270 411 aaPredicted RBP31.94■■■□□ 2.7
RCCD1-206ENST00000556618 NEFMP07197 916 aa31.93■■■□□ 2.7
RCCD1-206ENST00000556618 C1orf141Q5JVX7 400 aa31.93■■■□□ 2.7
RCCD1-206ENST00000556618 GAS2L2Q8NHY3 880 aa31.93■■■□□ 2.7
RCCD1-206ENST00000556618 AKAP4Q5JQC9 854 aa31.91■■■□□ 2.7
RCCD1-206ENST00000556618 CCDC146Q8IYE0 955 aa31.9■■■□□ 2.7
RCCD1-206ENST00000556618 MAPK8IP3Q9UPT6 1336 aa31.89■■■□□ 2.7
RCCD1-206ENST00000556618 RUNDC1Q96C34 613 aa31.89■■■□□ 2.7
RCCD1-206ENST00000556618 VIRMAQ69YN4 1812 aaKnown RBP31.88■■■□□ 2.69
RCCD1-206ENST00000556618 DOT1LQ8TEK3 1739 aa31.88■■■□□ 2.69
RCCD1-206ENST00000556618 HSP90AB1P08238 724 aaKnown RBP31.88■■■□□ 2.69
RCCD1-206ENST00000556618 DLG5Q8TDM6 1919 aa31.87■■■□□ 2.69
RCCD1-206ENST00000556618 FAM9BQ8IZU0 186 aa31.86■■■□□ 2.69
RCCD1-206ENST00000556618 ACSBG1Q96GR2 724 aa31.86■■■□□ 2.69
RCCD1-206ENST00000556618 TOGARAM1Q9Y4F4 1720 aa31.86■■■□□ 2.69
RCCD1-206ENST00000556618 TRIM37O94972 964 aa31.85■■■□□ 2.69
RCCD1-206ENST00000556618 DCAF5Q96JK2 942 aa31.85■■■□□ 2.69
RCCD1-206ENST00000556618 MPRIPQ6WCQ1 1025 aa31.85■■■□□ 2.69
RCCD1-206ENST00000556618 SCN11AQ9UI33 1791 aa31.84■■■□□ 2.69
RCCD1-206ENST00000556618 ITGB4P16144 1822 aa31.84■■■□□ 2.69
RCCD1-206ENST00000556618 NHSQ6T4R5 1651 aa31.84■■■□□ 2.69
RCCD1-206ENST00000556618 GNAT3A8MTJ3 354 aa31.84■■■□□ 2.69
RCCD1-206ENST00000556618 KCNQ2O43526 872 aa31.84■■■□□ 2.69
RCCD1-206ENST00000556618 NFE2L2Q16236 605 aa31.83■■■□□ 2.69
RCCD1-206ENST00000556618 MAP3K5Q99683 1374 aa31.83■■■□□ 2.69
RCCD1-206ENST00000556618 KDM6AO15550 1401 aaPredicted RBP31.83■■■□□ 2.69
RCCD1-206ENST00000556618 PRIM1P49642 420 aaKnown RBP31.82■■■□□ 2.68
RCCD1-206ENST00000556618 PTF1AQ7RTS3 328 aa31.81■■■□□ 2.68
RCCD1-206ENST00000556618 UPF1Q92900 1129 aaKnown RBP eCLIP31.81■■■□□ 2.68
RCCD1-206ENST00000556618 BCL11BQ9C0K0 894 aaPredicted RBP31.81■■■□□ 2.68
RCCD1-206ENST00000556618 LGR6Q9HBX8 967 aa31.8■■■□□ 2.68
RCCD1-206ENST00000556618 ADAMTS7Q9UKP4 1686 aa31.8■■■□□ 2.68
RCCD1-206ENST00000556618 TMPOP42166 694 aaKnown RBP31.79■■■□□ 2.68
RCCD1-206ENST00000556618 SYTL4Q96C24 671 aaPredicted RBP31.79■■■□□ 2.68
RCCD1-206ENST00000556618 TNS1Q9HBL0 1735 aaKnown RBP31.79■■■□□ 2.68
RCCD1-206ENST00000556618 ERVV-2B6SEH9 535 aa31.78■■■□□ 2.68
RCCD1-206ENST00000556618 RNMTO43148 476 aaKnown RBP31.78■■■□□ 2.68
RCCD1-206ENST00000556618 CCDC125Q86Z20 511 aa31.78■■■□□ 2.68
RCCD1-206ENST00000556618 BTAF1O14981 1849 aa31.76■■■□□ 2.68
RCCD1-206ENST00000556618 HTATSF1O43719 755 aaKnown RBP31.76■■■□□ 2.67
RCCD1-206ENST00000556618 IL17REQ8NFR9 667 aa31.76■■■□□ 2.67
RCCD1-206ENST00000556618 APAF1O14727 1248 aa31.75■■■□□ 2.67
RCCD1-206ENST00000556618 RIPK4P57078 832 aa31.75■■■□□ 2.67
RCCD1-206ENST00000556618 RRP7AQ9Y3A4 280 aaKnown RBP31.75■■■□□ 2.67
RCCD1-206ENST00000556618 RTF1Q92541 710 aaKnown RBP31.74■■■□□ 2.67
RCCD1-206ENST00000556618 SF3B2Q13435 895 aaKnown RBP31.73■■■□□ 2.67
RCCD1-206ENST00000556618 NEUROD2Q15784 382 aa31.73■■■□□ 2.67
RCCD1-206ENST00000556618 CABP4P57796 275 aa31.72■■■□□ 2.67
RCCD1-206ENST00000556618 PIGBQ92521 554 aa31.72■■■□□ 2.67
RCCD1-206ENST00000556618 TMOD3Q9NYL9 352 aa31.72■■■□□ 2.67
RCCD1-206ENST00000556618 APBA3O96018 575 aa31.71■■■□□ 2.67
RCCD1-206ENST00000556618 MCM10Q7L590 875 aa31.71■■■□□ 2.67
RCCD1-206ENST00000556618 CEMIPQ8WUJ3 1361 aa31.71■■■□□ 2.67
RCCD1-206ENST00000556618 DCTN1Q14203 1278 aa31.7■■■□□ 2.67
RCCD1-206ENST00000556618 NFATC2IPQ8NCF5 419 aa31.7■■■□□ 2.67
RCCD1-206ENST00000556618 SOCS7O14512 581 aa31.69■■■□□ 2.66
RCCD1-206ENST00000556618 SLC52A2Q9HAB3 445 aa31.69■■■□□ 2.66
RCCD1-206ENST00000556618 MRC1P22897 1456 aa31.69■■■□□ 2.66
RCCD1-206ENST00000556618 SIPA1L3O60292 1781 aaPredicted RBP31.66■■■□□ 2.66
RCCD1-206ENST00000556618 LMOD3Q0VAK6 560 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms