RNA–Protein interactions for RNA: ENST00000556401.2

SUB1P2-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 2, humanhuman

BASIC

Gene SUB1P2, Length 297 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P2-201ENST00000556401 CDCA7Q9BWT1 371 aaPredicted RBP7.08□□□□□ -1.28
SUB1P2-201ENST00000556401 ESF1Q9H501 851 aaKnown RBP7.08□□□□□ -1.28
SUB1P2-201ENST00000556401 TTLL8A6PVC2 850 aa7.07□□□□□ -1.28
SUB1P2-201ENST00000556401 PIK3CDO00329 1044 aa7.07□□□□□ -1.28
SUB1P2-201ENST00000556401 LZTS3O60299 673 aaPredicted RBP7.07□□□□□ -1.28
SUB1P2-201ENST00000556401 USP4Q13107 963 aa7.07□□□□□ -1.28
SUB1P2-201ENST00000556401 GLMNQ92990 594 aa7.07□□□□□ -1.28
SUB1P2-201ENST00000556401 MAN1A2O60476 641 aa7.06□□□□□ -1.28
SUB1P2-201ENST00000556401 GNRH1P01148 92 aa7.06□□□□□ -1.28
SUB1P2-201ENST00000556401 OXLD1Q5BKU9 147 aa7.06□□□□□ -1.28
SUB1P2-201ENST00000556401 HDGFL1Q5TGJ6 251 aa7.06□□□□□ -1.28
SUB1P2-201ENST00000556401 DNMT3LQ9UJW3 386 aa7.06□□□□□ -1.28
SUB1P2-201ENST00000556401 SKIP12755 728 aa7.05□□□□□ -1.28
SUB1P2-201ENST00000556401 GPC1P35052 558 aa7.05□□□□□ -1.28
SUB1P2-201ENST00000556401 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.05□□□□□ -1.28
SUB1P2-201ENST00000556401 EML3Q32P44 896 aa7.05□□□□□ -1.28
SUB1P2-201ENST00000556401 TSGA10IPQ3SY00 556 aa7.05□□□□□ -1.28
SUB1P2-201ENST00000556401 UCN2Q96RP3 112 aa7.05□□□□□ -1.28
SUB1P2-201ENST00000556401 INSM2Q96T92 566 aaPredicted RBP7.05□□□□□ -1.28
SUB1P2-201ENST00000556401 ZNF395Q9H8N7 513 aaPredicted RBP7.05□□□□□ -1.28
SUB1P2-201ENST00000556401 POLMQ9NP87 494 aaPredicted RBP7.05□□□□□ -1.28
SUB1P2-201ENST00000556401 USP17L5A8MUK1 530 aa7.04□□□□□ -1.28
SUB1P2-201ENST00000556401 CTSOP43234 321 aaPredicted RBP7.04□□□□□ -1.28
SUB1P2-201ENST00000556401 CLN3Q13286 438 aa7.04□□□□□ -1.28
SUB1P2-201ENST00000556401 FOXD4L5Q5VV16 416 aaPredicted RBP7.04□□□□□ -1.28
SUB1P2-201ENST00000556401 RNF217Q8TC41 542 aa7.04□□□□□ -1.28
SUB1P2-201ENST00000556401 A0A1W2PRU2 124 aa7.03□□□□□ -1.28
SUB1P2-201ENST00000556401 RNF144AP50876 292 aaPredicted RBP7.03□□□□□ -1.28
SUB1P2-201ENST00000556401 PLEKHM2Q8IWE5 1019 aa7.03□□□□□ -1.28
SUB1P2-201ENST00000556401 NPAS3Q8IXF0 933 aa7.03□□□□□ -1.28
SUB1P2-201ENST00000556401 ZNF775Q96BV0 537 aaPredicted RBP7.03□□□□□ -1.28
SUB1P2-201ENST00000556401 ZMYND15Q9H091 742 aa7.03□□□□□ -1.28
SUB1P2-201ENST00000556401 ARHGEF10LQ9HCE6 1279 aa7.03□□□□□ -1.28
SUB1P2-201ENST00000556401 SOBPA7XYQ1 873 aa7.02□□□□□ -1.29
SUB1P2-201ENST00000556401 ATP9BO43861 1147 aa7.02□□□□□ -1.29
SUB1P2-201ENST00000556401 NCOA4Q13772 614 aa7.02□□□□□ -1.29
SUB1P2-201ENST00000556401 CALR3Q96L12 384 aaKnown RBP7.02□□□□□ -1.29
SUB1P2-201ENST00000556401 USP17L3A6NCW0 530 aa7.01□□□□□ -1.29
SUB1P2-201ENST00000556401 USP17L4A6NCW7 530 aa7.01□□□□□ -1.29
SUB1P2-201ENST00000556401 MEN1O00255 615 aa7.01□□□□□ -1.29
SUB1P2-201ENST00000556401 ESCO1Q5FWF5 840 aa7.01□□□□□ -1.29
SUB1P2-201ENST00000556401 USP17L2Q6R6M4 530 aa7.01□□□□□ -1.29
SUB1P2-201ENST00000556401 TBC1D9Q6ZT07 1266 aa7.01□□□□□ -1.29
SUB1P2-201ENST00000556401 USP17L1Q7RTZ2 530 aa7.01□□□□□ -1.29
SUB1P2-201ENST00000556401 NLRP3Q96P20 1036 aa7.01□□□□□ -1.29
SUB1P2-201ENST00000556401 ESYT1Q9BSJ8 1104 aa7.01□□□□□ -1.29
SUB1P2-201ENST00000556401 NXF1Q9UBU9 619 aaKnown RBP7.01□□□□□ -1.29
SUB1P2-201ENST00000556401 NOD1Q9Y239 953 aa7.01□□□□□ -1.29
SUB1P2-201ENST00000556401 WASLO00401 505 aaPredicted RBP7□□□□□ -1.29
SUB1P2-201ENST00000556401 TERTO14746 1132 aaKnown RBP7□□□□□ -1.29
SUB1P2-201ENST00000556401 IL2RAP01589 272 aa7□□□□□ -1.29
SUB1P2-201ENST00000556401 LYSMD3Q7Z3D4 306 aa7□□□□□ -1.29
SUB1P2-201ENST00000556401 RAB6BQ9NRW1 208 aa7□□□□□ -1.29
SUB1P2-201ENST00000556401 FIGNL2A6NMB9 653 aa6.99□□□□□ -1.29
SUB1P2-201ENST00000556401 TRIM50Q86XT4 487 aa6.99□□□□□ -1.29
SUB1P2-201ENST00000556401 CNKSR1Q969H4 720 aa6.99□□□□□ -1.29
SUB1P2-201ENST00000556401 XAGE2Q96GT9 111 aa6.99□□□□□ -1.29
SUB1P2-201ENST00000556401 ETNK1Q9HBU6 452 aa6.99□□□□□ -1.29
SUB1P2-201ENST00000556401 HRH3Q9Y5N1 445 aa6.99□□□□□ -1.29
SUB1P2-201ENST00000556401 SCNN1DP51172 638 aa6.98□□□□□ -1.29
SUB1P2-201ENST00000556401 GDF10P55107 478 aa6.98□□□□□ -1.29
SUB1P2-201ENST00000556401 GTF2IP78347 998 aa6.98□□□□□ -1.29
SUB1P2-201ENST00000556401 PTSQ03393 145 aa6.98□□□□□ -1.29
SUB1P2-201ENST00000556401 NFX1Q12986 1120 aaKnown RBP6.98□□□□□ -1.29
SUB1P2-201ENST00000556401 SLC27A3Q5K4L6 730 aa6.98□□□□□ -1.29
SUB1P2-201ENST00000556401 DEPDC4Q8N2C3 294 aa6.98□□□□□ -1.29
SUB1P2-201ENST00000556401 PPP1R12CQ9BZL4 782 aa6.98□□□□□ -1.29
SUB1P2-201ENST00000556401 GRIP2Q9C0E4 1043 aa6.98□□□□□ -1.29
SUB1P2-201ENST00000556401 ZNF777Q9ULD5 760 aaPredicted RBP6.98□□□□□ -1.29
SUB1P2-201ENST00000556401 PCDHGA11Q9Y5H2 935 aa6.98□□□□□ -1.29
SUB1P2-201ENST00000556401 MAFBQ9Y5Q3 323 aaPredicted RBP6.98□□□□□ -1.29
SUB1P2-201ENST00000556401 PALM3A6NDB9 673 aaPredicted RBP6.97□□□□□ -1.29
SUB1P2-201ENST00000556401 SPATA31C2B4DYI2 1134 aa6.97□□□□□ -1.29
SUB1P2-201ENST00000556401 H3BM21 787 aa6.97□□□□□ -1.29
SUB1P2-201ENST00000556401 INHAP05111 366 aa6.97□□□□□ -1.29
SUB1P2-201ENST00000556401 ATP1A2P50993 1020 aa6.97□□□□□ -1.29
SUB1P2-201ENST00000556401 SLC16A10Q8TF71 515 aa6.97□□□□□ -1.29
SUB1P2-201ENST00000556401 TFIP11Q9UBB9 837 aaKnown RBP6.97□□□□□ -1.29
SUB1P2-201ENST00000556401 SLC35F4A4IF30 521 aa6.96□□□□□ -1.3
SUB1P2-201ENST00000556401 WFS1O76024 890 aa6.96□□□□□ -1.3
SUB1P2-201ENST00000556401 WDR44Q5JSH3 913 aa6.96□□□□□ -1.3
SUB1P2-201ENST00000556401 TREML4Q6UXN2 200 aa6.96□□□□□ -1.3
SUB1P2-201ENST00000556401 FHDC1Q9C0D6 1143 aaPredicted RBP6.96□□□□□ -1.3
SUB1P2-201ENST00000556401 TMEM229AB2RXF0 380 aa6.95□□□□□ -1.3
SUB1P2-201ENST00000556401 PPFIA3O75145 1194 aa6.95□□□□□ -1.3
SUB1P2-201ENST00000556401 CENPCQ03188 943 aa6.95□□□□□ -1.3
SUB1P2-201ENST00000556401 TLR1Q15399 786 aa6.95□□□□□ -1.3
SUB1P2-201ENST00000556401 LCE2AQ5TA79 106 aaPredicted RBP6.95□□□□□ -1.3
SUB1P2-201ENST00000556401 ERICH6Q7L0X2 663 aa6.95□□□□□ -1.3
SUB1P2-201ENST00000556401 PRICKLE2Q7Z3G6 844 aa6.95□□□□□ -1.3
SUB1P2-201ENST00000556401 C14orf37Q86TY3 774 aa6.95□□□□□ -1.3
SUB1P2-201ENST00000556401 ZSCAN10Q96SZ4 725 aaPredicted RBP6.95□□□□□ -1.3
SUB1P2-201ENST00000556401 SENP3-EIF4A1A0A087X0R7 540 aa6.94□□□□□ -1.3
SUB1P2-201ENST00000556401 STAU1O95793 577 aaKnown RBP6.94□□□□□ -1.3
SUB1P2-201ENST00000556401 VSIG8P0DPA2 414 aa6.94□□□□□ -1.3
SUB1P2-201ENST00000556401 GTF2E1P29083 439 aaPredicted RBP6.94□□□□□ -1.3
SUB1P2-201ENST00000556401 PSME1Q06323 249 aa6.94□□□□□ -1.3
SUB1P2-201ENST00000556401 TAS1R3Q7RTX0 852 aa6.94□□□□□ -1.3
SUB1P2-201ENST00000556401 CCDC155Q8N6L0 562 aa6.94□□□□□ -1.3
SUB1P2-201ENST00000556401 SLC4A9Q96Q91 983 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms