RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 PRIMPOLQ96LW4 560 aa4.92□□□□□ -1.62
MTHFD1-212ENST00000555858 FCF1Q9Y324 198 aaKnown RBP4.92□□□□□ -1.62
MTHFD1-212ENST00000555858 PCDHB11Q9Y5F2 797 aa4.92□□□□□ -1.62
MTHFD1-212ENST00000555858 M0R2N6 131 aa4.91□□□□□ -1.62
MTHFD1-212ENST00000555858 ABL1P00519 1130 aa4.91□□□□□ -1.62
MTHFD1-212ENST00000555858 LCE2DQ5TA82 110 aaPredicted RBP4.91□□□□□ -1.62
MTHFD1-212ENST00000555858 ZNF516Q92618 1163 aa4.91□□□□□ -1.62
MTHFD1-212ENST00000555858 H3BRB1 525 aa4.9□□□□□ -1.63
MTHFD1-212ENST00000555858 ICMTO60725 284 aa4.9□□□□□ -1.63
MTHFD1-212ENST00000555858 S1PR4O95977 384 aa4.9□□□□□ -1.63
MTHFD1-212ENST00000555858 MYCP01106 439 aaPredicted RBP4.9□□□□□ -1.63
MTHFD1-212ENST00000555858 WEE1P30291 646 aa4.9□□□□□ -1.63
MTHFD1-212ENST00000555858 SH3BP2P78314 561 aa4.9□□□□□ -1.63
MTHFD1-212ENST00000555858 NOM1Q5C9Z4 860 aaKnown RBP4.9□□□□□ -1.63
MTHFD1-212ENST00000555858 GLYCTKQ8IVS8 523 aa4.9□□□□□ -1.63
MTHFD1-212ENST00000555858 HINFPQ9BQA5 517 aa4.9□□□□□ -1.63
MTHFD1-212ENST00000555858 BCL2L13Q9BXK5 485 aa4.9□□□□□ -1.63
MTHFD1-212ENST00000555858 TUT1Q9H6E5 874 aaKnown RBP4.9□□□□□ -1.63
MTHFD1-212ENST00000555858 ANKRD33BA6NCL7 494 aa4.89□□□□□ -1.63
MTHFD1-212ENST00000555858 PTCD1O75127 700 aaKnown RBP4.89□□□□□ -1.63
MTHFD1-212ENST00000555858 ZNF211Q13398 564 aaPredicted RBP4.89□□□□□ -1.63
MTHFD1-212ENST00000555858 KCTD15Q96SI1 283 aaPredicted RBP4.89□□□□□ -1.63
MTHFD1-212ENST00000555858 POTEMA6NI47 508 aa4.88□□□□□ -1.63
MTHFD1-212ENST00000555858 C21orf2O43822 256 aa4.88□□□□□ -1.63
MTHFD1-212ENST00000555858 ZNF16P17020 682 aaPredicted RBP4.88□□□□□ -1.63
MTHFD1-212ENST00000555858 SF3B2Q13435 895 aaKnown RBP4.88□□□□□ -1.63
MTHFD1-212ENST00000555858 NPAS4Q8IUM7 802 aa4.88□□□□□ -1.63
MTHFD1-212ENST00000555858 TSEN2Q8NCE0 465 aaKnown RBP4.88□□□□□ -1.63
MTHFD1-212ENST00000555858 GTF3C2Q8WUA4 911 aaPredicted RBP4.88□□□□□ -1.63
MTHFD1-212ENST00000555858 TRIM52Q96A61 297 aa4.88□□□□□ -1.63
MTHFD1-212ENST00000555858 MRRFQ96E11 262 aaKnown RBP4.88□□□□□ -1.63
MTHFD1-212ENST00000555858 KRTAP3-3Q9BYR6 98 aa4.88□□□□□ -1.63
MTHFD1-212ENST00000555858 KRTAP3-2Q9BYR7 98 aa4.88□□□□□ -1.63
MTHFD1-212ENST00000555858 MAP4K5Q9Y4K4 846 aa4.88□□□□□ -1.63
MTHFD1-212ENST00000555858 ZBTB24O43167 697 aaPredicted RBP4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 IGSF3O75054 1194 aa4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 LGR5O75473 907 aa4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 VARSP26640 1264 aaKnown RBP4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 PTPN5P54829 565 aa4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 RAB15P59190 212 aa4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 FKBP4Q02790 459 aaKnown RBP eCLIP4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 FKBP5Q13451 457 aaPredicted RBP4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 ZNF326Q5BKZ1 582 aaKnown RBP4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 INTS6LQ5JSJ4 861 aaKnown RBP4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 NKX2-3Q8TAU0 364 aa4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 GIPC2Q8TF65 315 aa4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 COL26A1Q96A83 441 aa4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 MKNK1Q9BUB5 465 aa4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 ESF1Q9H501 851 aaKnown RBP4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 ANO2Q9NQ90 1003 aa4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 IGSF5Q9NSI5 407 aa4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 ZNF358Q9NW07 568 aa4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 KIAA1522Q9P206 1035 aaPredicted RBP4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 SEPT3Q9UH03 358 aa4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 DCTN4Q9UJW0 460 aa4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 DNMT3AQ9Y6K1 912 aaPredicted RBP4.87□□□□□ -1.63
MTHFD1-212ENST00000555858 ERVH48-1M5A8F1 160 aa4.86□□□□□ -1.63
MTHFD1-212ENST00000555858 FOXO3O43524 673 aa4.86□□□□□ -1.63
MTHFD1-212ENST00000555858 IGFBP4P22692 258 aa4.86□□□□□ -1.63
MTHFD1-212ENST00000555858 MAPK1P28482 360 aa4.86□□□□□ -1.63
MTHFD1-212ENST00000555858 SCTRP47872 440 aa4.86□□□□□ -1.63
MTHFD1-212ENST00000555858 WNT7BP56706 349 aa4.86□□□□□ -1.63
MTHFD1-212ENST00000555858 ERVK-9P63128 1117 aa4.86□□□□□ -1.63
MTHFD1-212ENST00000555858 TRIM32Q13049 653 aa4.86□□□□□ -1.63
MTHFD1-212ENST00000555858 VASH1Q7L8A9 365 aaPredicted RBP4.86□□□□□ -1.63
MTHFD1-212ENST00000555858 ASB16Q96NS5 453 aa4.86□□□□□ -1.63
MTHFD1-212ENST00000555858 WASLO00401 505 aaPredicted RBP4.85□□□□□ -1.63
MTHFD1-212ENST00000555858 BACH1O14867 736 aa4.85□□□□□ -1.63
MTHFD1-212ENST00000555858 ARHGAP4P98171 946 aa4.85□□□□□ -1.63
MTHFD1-212ENST00000555858 ECM1Q16610 540 aa4.85□□□□□ -1.63
MTHFD1-212ENST00000555858 CC2D2BQ6DHV5 1058 aa4.85□□□□□ -1.63
MTHFD1-212ENST00000555858 ZSCAN29Q8IWY8 852 aaPredicted RBP4.85□□□□□ -1.63
MTHFD1-212ENST00000555858 HELQQ8TDG4 1101 aa4.85□□□□□ -1.63
MTHFD1-212ENST00000555858 TTBK1Q5TCY1 1321 aaPredicted RBP4.84□□□□□ -1.63
MTHFD1-212ENST00000555858 TMEM229AB2RXF0 380 aa4.84□□□□□ -1.63
MTHFD1-212ENST00000555858 PPEF1O14829 653 aaPredicted RBP4.84□□□□□ -1.63
MTHFD1-212ENST00000555858 SCNN1DP51172 638 aa4.84□□□□□ -1.63
MTHFD1-212ENST00000555858 GDF10P55107 478 aa4.84□□□□□ -1.63
MTHFD1-212ENST00000555858 DHX9Q08211 1270 aaKnown RBP4.84□□□□□ -1.63
MTHFD1-212ENST00000555858 COL19A1Q14993 1142 aa4.84□□□□□ -1.63
MTHFD1-212ENST00000555858 CAPN12Q6ZSI9 719 aa4.84□□□□□ -1.63
MTHFD1-212ENST00000555858 GAS2L2Q8NHY3 880 aa4.84□□□□□ -1.63
MTHFD1-212ENST00000555858 PURBQ96QR8 312 aaKnown RBP4.84□□□□□ -1.63
MTHFD1-212ENST00000555858 FAM13AO94988 1023 aa4.83□□□□□ -1.64
MTHFD1-212ENST00000555858 NPR3P17342 541 aa4.83□□□□□ -1.64
MTHFD1-212ENST00000555858 VAMP1P23763 118 aa4.83□□□□□ -1.64
MTHFD1-212ENST00000555858 GGCXP38435 758 aa4.83□□□□□ -1.64
MTHFD1-212ENST00000555858 SKOR1P84550 965 aa4.83□□□□□ -1.64
MTHFD1-212ENST00000555858 MYT1Q01538 1121 aa4.83□□□□□ -1.64
MTHFD1-212ENST00000555858 MTMR3Q13615 1198 aa4.83□□□□□ -1.64
MTHFD1-212ENST00000555858 FBXO33Q7Z6M2 555 aa4.83□□□□□ -1.64
MTHFD1-212ENST00000555858 ANKLE1Q8NAG6 615 aa4.83□□□□□ -1.64
MTHFD1-212ENST00000555858 SCG3Q8WXD2 468 aaKnown RBP4.83□□□□□ -1.64
MTHFD1-212ENST00000555858 VTI1AQ96AJ9 217 aa4.83□□□□□ -1.64
MTHFD1-212ENST00000555858 CDK15Q96Q40 435 aa4.83□□□□□ -1.64
MTHFD1-212ENST00000555858 BCL11AQ9H165 835 aa4.83□□□□□ -1.64
MTHFD1-212ENST00000555858 OSBPL3Q9H4L5 887 aa4.83□□□□□ -1.64
MTHFD1-212ENST00000555858 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.83□□□□□ -1.64
MTHFD1-212ENST00000555858 ATAD2Q6PL18 1390 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms