RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 TMPRSS4Q9NRS4 437 aa9.34□□□□□ -0.91
ATXN3-233ENST00000555816 KIF21AQ7Z4S6 1674 aa9.34□□□□□ -0.91
ATXN3-233ENST00000555816 RNF217Q8TC41 542 aa9.33□□□□□ -0.92
ATXN3-233ENST00000555816 AGBL1Q96MI9 1066 aa9.33□□□□□ -0.92
ATXN3-233ENST00000555816 INSM2Q96T92 566 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-233ENST00000555816 POLMQ9NP87 494 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-233ENST00000555816 APBB1O00213 710 aa9.32□□□□□ -0.92
ATXN3-233ENST00000555816 ITGA6P23229 1130 aa9.32□□□□□ -0.92
ATXN3-233ENST00000555816 IL27Q8NEV9 243 aa9.32□□□□□ -0.92
ATXN3-233ENST00000555816 ZNF330Q9Y3S2 320 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-233ENST00000555816 SV2AQ7L0J3 742 aa9.31□□□□□ -0.92
ATXN3-233ENST00000555816 GJD4Q96KN9 370 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-233ENST00000555816 ZNF395Q9H8N7 513 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-233ENST00000555816 CEP164Q9UPV0 1460 aa9.3□□□□□ -0.92
ATXN3-233ENST00000555816 ADD1P35611 737 aaKnown RBP9.3□□□□□ -0.92
ATXN3-233ENST00000555816 GPR161Q8N6U8 529 aaKnown RBP9.3□□□□□ -0.92
ATXN3-233ENST00000555816 GPC1P35052 558 aa9.29□□□□□ -0.92
ATXN3-233ENST00000555816 RNF144AP50876 292 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-233ENST00000555816 RAB15P59190 212 aa9.29□□□□□ -0.92
ATXN3-233ENST00000555816 KDF1Q8NAX2 398 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-233ENST00000555816 GMCL1Q96IK5 515 aa9.29□□□□□ -0.92
ATXN3-233ENST00000555816 COL25A1Q9BXS0 654 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-233ENST00000555816 FANCD2Q9BXW9 1451 aa9.28□□□□□ -0.92
ATXN3-233ENST00000555816 LYSMD3Q7Z3D4 306 aa9.28□□□□□ -0.92
ATXN3-233ENST00000555816 CNTNAP3BQ96NU0 1288 aa9.28□□□□□ -0.92
ATXN3-233ENST00000555816 CNTNAP3Q9BZ76 1288 aa9.28□□□□□ -0.92
ATXN3-233ENST00000555816 PCDHB9Q9Y5E1 797 aa9.28□□□□□ -0.92
ATXN3-233ENST00000555816 ATP5J2-PTCD1G3V325 749 aa9.27□□□□□ -0.93
ATXN3-233ENST00000555816 FBXO45P0C2W1 286 aa9.27□□□□□ -0.93
ATXN3-233ENST00000555816 KRT76Q01546 638 aa9.27□□□□□ -0.93
ATXN3-233ENST00000555816 KCNMA1Q12791 1236 aa9.27□□□□□ -0.93
ATXN3-233ENST00000555816 NR1H3Q13133 447 aa9.27□□□□□ -0.93
ATXN3-233ENST00000555816 GIGYF1O75420 1035 aaPredicted RBP9.26□□□□□ -0.93
ATXN3-233ENST00000555816 SLURP2P0DP57 97 aa9.26□□□□□ -0.93
ATXN3-233ENST00000555816 FOXD4L5Q5VV16 416 aaPredicted RBP9.26□□□□□ -0.93
ATXN3-233ENST00000555816 CYB5RLQ6IPT4 315 aa9.26□□□□□ -0.93
ATXN3-233ENST00000555816 VWA5B2Q8N398 1253 aa9.26□□□□□ -0.93
ATXN3-233ENST00000555816 SENP3-EIF4A1A0A087X0R7 540 aa9.25□□□□□ -0.93
ATXN3-233ENST00000555816 ERVK-9P63128 1117 aa9.25□□□□□ -0.93
ATXN3-233ENST00000555816 CC2D2BQ6DHV5 1058 aa9.25□□□□□ -0.93
ATXN3-233ENST00000555816 CYLDQ9NQC7 956 aa9.25□□□□□ -0.93
ATXN3-233ENST00000555816 CFTRP13569 1480 aa9.25□□□□□ -0.93
ATXN3-233ENST00000555816 RNF225M0QZC1 329 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-233ENST00000555816 BRPF1P55201 1214 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-233ENST00000555816 NDUFB9Q9Y6M9 179 aa9.24□□□□□ -0.93
ATXN3-233ENST00000555816 WDR44Q5JSH3 913 aa9.23□□□□□ -0.93
ATXN3-233ENST00000555816 CDC14CA4D256 554 aa9.22□□□□□ -0.93
ATXN3-233ENST00000555816 CYP2U1Q7Z449 544 aa9.22□□□□□ -0.93
ATXN3-233ENST00000555816 ESF1Q9H501 851 aaKnown RBP9.22□□□□□ -0.93
ATXN3-233ENST00000555816 A0A1W2PRU2 124 aa9.21□□□□□ -0.94
ATXN3-233ENST00000555816 FOXR1Q6PIV2 292 aa9.21□□□□□ -0.94
ATXN3-233ENST00000555816 PRM3Q9NNZ6 103 aa9.21□□□□□ -0.94
ATXN3-233ENST00000555816 ADAMTS8Q9UP79 889 aa9.21□□□□□ -0.94
ATXN3-233ENST00000555816 URB2Q14146 1524 aaKnown RBP9.21□□□□□ -0.94
ATXN3-233ENST00000555816 H7C1W4 665 aa9.2□□□□□ -0.94
ATXN3-233ENST00000555816 PRKCSHP14314 528 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-233ENST00000555816 RNFT1Q5M7Z0 435 aa9.2□□□□□ -0.94
ATXN3-233ENST00000555816 PRICKLE2Q7Z3G6 844 aa9.2□□□□□ -0.94
ATXN3-233ENST00000555816 NLRP3Q96P20 1036 aa9.2□□□□□ -0.94
ATXN3-233ENST00000555816 SRSF11Q05519 484 aaKnown RBP9.19□□□□□ -0.94
ATXN3-233ENST00000555816 CLN3Q13286 438 aa9.19□□□□□ -0.94
ATXN3-233ENST00000555816 ZNF385CQ66K41 422 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-233ENST00000555816 TRIM22Q8IYM9 498 aa9.19□□□□□ -0.94
ATXN3-233ENST00000555816 DYRK1BQ9Y463 629 aa9.19□□□□□ -0.94
ATXN3-233ENST00000555816 MEN1O00255 615 aa9.18□□□□□ -0.94
ATXN3-233ENST00000555816 TMEM151AQ8N4L1 468 aa9.18□□□□□ -0.94
ATXN3-233ENST00000555816 SVOPQ8N4V2 548 aa9.18□□□□□ -0.94
ATXN3-233ENST00000555816 MTMR14Q8NCE2 650 aa9.18□□□□□ -0.94
ATXN3-233ENST00000555816 GRIP2Q9C0E4 1043 aa9.18□□□□□ -0.94
ATXN3-233ENST00000555816 RIMBP3CA6NJZ7 1639 aa9.17□□□□□ -0.94
ATXN3-233ENST00000555816 RIMBP3BA6NNM3 1639 aa9.17□□□□□ -0.94
ATXN3-233ENST00000555816 RIMBP3Q9UFD9 1639 aa9.17□□□□□ -0.94
ATXN3-233ENST00000555816 ARHGEF11O15085 1522 aa9.17□□□□□ -0.94
ATXN3-233ENST00000555816 TRAK2O60296 914 aa9.17□□□□□ -0.94
ATXN3-233ENST00000555816 ARHGEF15O94989 841 aa9.17□□□□□ -0.94
ATXN3-233ENST00000555816 SLC27A3Q5K4L6 730 aa9.17□□□□□ -0.94
ATXN3-233ENST00000555816 IFT140Q96RY7 1462 aa9.16□□□□□ -0.94
ATXN3-233ENST00000555816 SPATA31C2B4DYI2 1134 aa9.16□□□□□ -0.94
ATXN3-233ENST00000555816 GNRH1P01148 92 aa9.16□□□□□ -0.94
ATXN3-233ENST00000555816 WIZO95785 1651 aa9.16□□□□□ -0.94
ATXN3-233ENST00000555816 ENAMQ9NRM1 1142 aa9.15□□□□□ -0.94
ATXN3-233ENST00000555816 PCDHB11Q9Y5F2 797 aa9.15□□□□□ -0.94
ATXN3-233ENST00000555816 ZNF608Q9ULD9 1512 aaPredicted RBP9.15□□□□□ -0.95
ATXN3-233ENST00000555816 ADAMTS2O95450 1211 aa9.14□□□□□ -0.95
ATXN3-233ENST00000555816 GSK3AP49840 483 aa9.14□□□□□ -0.95
ATXN3-233ENST00000555816 RASSF7Q02833 373 aa9.14□□□□□ -0.95
ATXN3-233ENST00000555816 CEP126Q9P2H0 1117 aa9.14□□□□□ -0.95
ATXN3-233ENST00000555816 GPR37L1O60883 481 aa9.13□□□□□ -0.95
ATXN3-233ENST00000555816 GDF11O95390 407 aa9.13□□□□□ -0.95
ATXN3-233ENST00000555816 MYCP01106 439 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-233ENST00000555816 MAP3K10Q02779 954 aa9.13□□□□□ -0.95
ATXN3-233ENST00000555816 NBPF10Q6P3W6 841 aaKnown RBP9.13□□□□□ -0.95
ATXN3-233ENST00000555816 NBPF15Q8N660 670 aa9.13□□□□□ -0.95
ATXN3-233ENST00000555816 ZNF837Q96EG3 531 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-233ENST00000555816 SCARF2Q96GP6 870 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-233ENST00000555816 OSBPL3Q9H4L5 887 aa9.13□□□□□ -0.95
ATXN3-233ENST00000555816 SNRKQ9NRH2 765 aa9.13□□□□□ -0.95
ATXN3-233ENST00000555816 MBIPQ9NS73 344 aa9.13□□□□□ -0.95
ATXN3-233ENST00000555816 RSF1Q96T23 1441 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-233ENST00000555816 RHOQP17081 205 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms