RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 PCDHB9Q9Y5E1 797 aa8.14□□□□□ -1.11
KTN1-222ENST00000555506 SCARF1Q14162 830 aa8.13□□□□□ -1.11
KTN1-222ENST00000555506 PPP1R26Q5T8A7 1209 aaPredicted RBP8.13□□□□□ -1.11
KTN1-222ENST00000555506 Q8N3U1 123 aa8.13□□□□□ -1.11
KTN1-222ENST00000555506 NBPF20Q3BBV1 942 aa8.13□□□□□ -1.11
KTN1-222ENST00000555506 ESPNB1AK53 854 aa8.12□□□□□ -1.11
KTN1-222ENST00000555506 IRS1P35568 1242 aa8.12□□□□□ -1.11
KTN1-222ENST00000555506 RAB15P59190 212 aa8.12□□□□□ -1.11
KTN1-222ENST00000555506 EMILIN1Q9Y6C2 1016 aa8.12□□□□□ -1.11
KTN1-222ENST00000555506 GIGYF1O75420 1035 aaPredicted RBP8.1□□□□□ -1.11
KTN1-222ENST00000555506 TMPRSS4Q9NRS4 437 aa8.1□□□□□ -1.11
KTN1-222ENST00000555506 ERVH48-1M5A8F1 160 aa8.09□□□□□ -1.11
KTN1-222ENST00000555506 MRPL14Q6P1L8 145 aaKnown RBP8.09□□□□□ -1.11
KTN1-222ENST00000555506 MARSP56192 900 aaKnown RBP8.08□□□□□ -1.12
KTN1-222ENST00000555506 DHX9Q08211 1270 aaKnown RBP8.08□□□□□ -1.12
KTN1-222ENST00000555506 VAC14Q08AM6 782 aa8.08□□□□□ -1.12
KTN1-222ENST00000555506 CBLBQ13191 982 aa8.08□□□□□ -1.12
KTN1-222ENST00000555506 CALR3Q96L12 384 aaKnown RBP8.08□□□□□ -1.12
KTN1-222ENST00000555506 PGPEP1Q9NXJ5 209 aa8.08□□□□□ -1.12
KTN1-222ENST00000555506 POM121CA8CG34 1229 aa8.07□□□□□ -1.12
KTN1-222ENST00000555506 MSTNO14793 375 aa8.07□□□□□ -1.12
KTN1-222ENST00000555506 MEIOBQ8N635 442 aa8.07□□□□□ -1.12
KTN1-222ENST00000555506 GLMNQ92990 594 aa8.07□□□□□ -1.12
KTN1-222ENST00000555506 PURBQ96QR8 312 aaKnown RBP8.07□□□□□ -1.12
KTN1-222ENST00000555506 WASHC4Q2M389 1173 aa8.06□□□□□ -1.12
KTN1-222ENST00000555506 SEPT12Q8IYM1 358 aa8.06□□□□□ -1.12
KTN1-222ENST00000555506 ZNF784Q8NCA9 323 aaPredicted RBP8.06□□□□□ -1.12
KTN1-222ENST00000555506 SCARF2Q96GP6 870 aaPredicted RBP8.06□□□□□ -1.12
KTN1-222ENST00000555506 MCCD1P59942 119 aaPredicted RBP8.06□□□□□ -1.12
KTN1-222ENST00000555506 Q6ZVU0 165 aa8.06□□□□□ -1.12
KTN1-222ENST00000555506 LILRA1O75019 489 aa8.05□□□□□ -1.12
KTN1-222ENST00000555506 PDIA4P13667 645 aaKnown RBP8.05□□□□□ -1.12
KTN1-222ENST00000555506 C6orf118Q5T5N4 469 aa8.05□□□□□ -1.12
KTN1-222ENST00000555506 LINC00528Q8N1L1 170 aa8.05□□□□□ -1.12
KTN1-222ENST00000555506 SVOPQ8N4V2 548 aa8.05□□□□□ -1.12
KTN1-222ENST00000555506 CEP126Q9P2H0 1117 aa8.05□□□□□ -1.12
KTN1-222ENST00000555506 ADD1P35611 737 aaKnown RBP8.04□□□□□ -1.12
KTN1-222ENST00000555506 EIF4G2P78344 907 aaKnown RBP eCLIP8.03□□□□□ -1.12
KTN1-222ENST00000555506 ZNF592Q92610 1267 aa8.03□□□□□ -1.12
KTN1-222ENST00000555506 CYLDQ9NQC7 956 aa8.03□□□□□ -1.12
KTN1-222ENST00000555506 MAN1A2O60476 641 aa8.02□□□□□ -1.13
KTN1-222ENST00000555506 PPFIA3O75145 1194 aa8.02□□□□□ -1.13
KTN1-222ENST00000555506 BMP2P12643 396 aa8.02□□□□□ -1.13
KTN1-222ENST00000555506 HDGFL1Q5TGJ6 251 aa8.02□□□□□ -1.13
KTN1-222ENST00000555506 AGBL1Q96MI9 1066 aa8.02□□□□□ -1.13
KTN1-222ENST00000555506 KRTAP4-7Q9BYR0 210 aa8.02□□□□□ -1.13
KTN1-222ENST00000555506 TRIM26Q12899 539 aaPredicted RBP8.01□□□□□ -1.13
KTN1-222ENST00000555506 RNF20Q5VTR2 975 aa8.01□□□□□ -1.13
KTN1-222ENST00000555506 ADAMTS19Q8TE59 1207 aa8.01□□□□□ -1.13
KTN1-222ENST00000555506 CNTNAP3BQ96NU0 1288 aa8.01□□□□□ -1.13
KTN1-222ENST00000555506 TSEN34Q9BSV6 310 aaKnown RBP8.01□□□□□ -1.13
KTN1-222ENST00000555506 CNTNAP3Q9BZ76 1288 aa8.01□□□□□ -1.13
KTN1-222ENST00000555506 SOBPA7XYQ1 873 aa8□□□□□ -1.13
KTN1-222ENST00000555506 UPP2O95045 317 aa8□□□□□ -1.13
KTN1-222ENST00000555506 KDF1Q8NAX2 398 aaPredicted RBP8□□□□□ -1.13
KTN1-222ENST00000555506 CCDC85AQ96PX6 553 aaPredicted RBP8□□□□□ -1.13
KTN1-222ENST00000555506 PODXL2Q9NZ53 605 aa8□□□□□ -1.13
KTN1-222ENST00000555506 PCDHB11Q9Y5F2 797 aa8□□□□□ -1.13
KTN1-222ENST00000555506 PPP1R15AO75807 674 aaPredicted RBP8□□□□□ -1.13
KTN1-222ENST00000555506 SCTRP47872 440 aa8□□□□□ -1.13
KTN1-222ENST00000555506 RELBQ01201 579 aa8□□□□□ -1.13
KTN1-222ENST00000555506 TSGA10IPQ3SY00 556 aa8□□□□□ -1.13
KTN1-222ENST00000555506 PHTF2Q8N3S3 785 aa8□□□□□ -1.13
KTN1-222ENST00000555506 ADH1AP07327 375 aa7.99□□□□□ -1.13
KTN1-222ENST00000555506 ERVK-9P63128 1117 aa7.99□□□□□ -1.13
KTN1-222ENST00000555506 CDCA7Q9BWT1 371 aaPredicted RBP7.99□□□□□ -1.13
KTN1-222ENST00000555506 SPINT1O43278 529 aa7.98□□□□□ -1.13
KTN1-222ENST00000555506 ZNF385CQ66K41 422 aaPredicted RBP7.98□□□□□ -1.13
KTN1-222ENST00000555506 CC2D2BQ6DHV5 1058 aa7.98□□□□□ -1.13
KTN1-222ENST00000555506 CCDC125Q86Z20 511 aa7.98□□□□□ -1.13
KTN1-222ENST00000555506 GALNT6Q8NCL4 622 aa7.98□□□□□ -1.13
KTN1-222ENST00000555506 ALG2Q9H553 416 aa7.98□□□□□ -1.13
KTN1-222ENST00000555506 ZNF395Q9H8N7 513 aaPredicted RBP7.98□□□□□ -1.13
KTN1-222ENST00000555506 SOS2Q07890 1332 aaPredicted RBP7.98□□□□□ -1.13
KTN1-222ENST00000555506 SOX11P35716 441 aa7.97□□□□□ -1.13
KTN1-222ENST00000555506 SEMA3FQ13275 785 aa7.97□□□□□ -1.13
KTN1-222ENST00000555506 PTGIRP43119 386 aa7.96□□□□□ -1.13
KTN1-222ENST00000555506 SLFNL1Q499Z3 407 aa7.96□□□□□ -1.13
KTN1-222ENST00000555506 RNF135Q8IUD6 432 aa7.96□□□□□ -1.13
KTN1-222ENST00000555506 TRAIPQ9BWF2 469 aa7.96□□□□□ -1.13
KTN1-222ENST00000555506 DNMT3LQ9UJW3 386 aa7.96□□□□□ -1.13
KTN1-222ENST00000555506 TTLL8A6PVC2 850 aa7.95□□□□□ -1.14
KTN1-222ENST00000555506 K7ELQ4 463 aaPredicted RBP7.95□□□□□ -1.14
KTN1-222ENST00000555506 CTSOP43234 321 aaPredicted RBP7.95□□□□□ -1.14
KTN1-222ENST00000555506 RETREG2Q8NC44 543 aa7.95□□□□□ -1.14
KTN1-222ENST00000555506 INSM2Q96T92 566 aaPredicted RBP7.95□□□□□ -1.14
KTN1-222ENST00000555506 SPOCK3Q9BQ16 436 aa7.95□□□□□ -1.14
KTN1-222ENST00000555506 OSBPL3Q9H4L5 887 aa7.95□□□□□ -1.14
KTN1-222ENST00000555506 CHIC2Q9UKJ5 165 aa7.95□□□□□ -1.14
KTN1-222ENST00000555506 PIK3CDO00329 1044 aa7.94□□□□□ -1.14
KTN1-222ENST00000555506 CFAP70Q5T0N1 1121 aa7.94□□□□□ -1.14
KTN1-222ENST00000555506 PPP1R12CQ9BZL4 782 aa7.94□□□□□ -1.14
KTN1-222ENST00000555506 ACIN1Q9UKV3 1341 aaKnown RBP7.94□□□□□ -1.14
KTN1-222ENST00000555506 FIGNL2A6NMB9 653 aa7.94□□□□□ -1.14
KTN1-222ENST00000555506 ATP5J2-PTCD1G3V325 749 aa7.94□□□□□ -1.14
KTN1-222ENST00000555506 KRT76Q01546 638 aa7.94□□□□□ -1.14
KTN1-222ENST00000555506 DOLKQ9UPQ8 538 aa7.94□□□□□ -1.14
KTN1-222ENST00000555506 ZBTB7CA1YPR0 619 aa7.93□□□□□ -1.14
KTN1-222ENST00000555506 PLA2G4EQ3MJ16 856 aa7.93□□□□□ -1.14
KTN1-222ENST00000555506 TRIM52Q96A61 297 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms