RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 CAPN15O75808 1086 aa11.61□□□□□ -0.55
TRIM9-204ENST00000555170 YBX3P16989 372 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRIM9-204ENST00000555170 PANK3Q9H999 370 aa11.61□□□□□ -0.55
TRIM9-204ENST00000555170 GPBP1L1Q9HC44 474 aaPredicted RBP11.61□□□□□ -0.55
TRIM9-204ENST00000555170 ATP10DQ9P241 1426 aa11.6□□□□□ -0.55
TRIM9-204ENST00000555170 MAP3K19Q56UN5 1328 aa11.6□□□□□ -0.55
TRIM9-204ENST00000555170 GRIN3BO60391 1043 aa11.59□□□□□ -0.55
TRIM9-204ENST00000555170 ZNF827Q17R98 1081 aa11.59□□□□□ -0.55
TRIM9-204ENST00000555170 TOM1L2Q6ZVM7 507 aa11.59□□□□□ -0.55
TRIM9-204ENST00000555170 ZNF526Q8TF50 670 aaPredicted RBP11.59□□□□□ -0.55
TRIM9-204ENST00000555170 CGNL1Q0VF96 1302 aa11.59□□□□□ -0.55
TRIM9-204ENST00000555170 WDR17Q8IZU2 1322 aa11.59□□□□□ -0.55
TRIM9-204ENST00000555170 RTL1A6NKG5 1358 aa11.58□□□□□ -0.56
TRIM9-204ENST00000555170 RRS1Q15050 365 aaKnown RBP11.58□□□□□ -0.56
TRIM9-204ENST00000555170 BCL9O00512 1426 aa11.58□□□□□ -0.56
TRIM9-204ENST00000555170 ERBB3P21860 1342 aa11.58□□□□□ -0.56
TRIM9-204ENST00000555170 POLD1P28340 1107 aa11.57□□□□□ -0.56
TRIM9-204ENST00000555170 COL13A1Q5TAT6 717 aaPredicted RBP11.57□□□□□ -0.56
TRIM9-204ENST00000555170 DNAJC5GQ8N7S2 189 aa11.57□□□□□ -0.56
TRIM9-204ENST00000555170 HOXC9P31274 260 aa11.56□□□□□ -0.56
TRIM9-204ENST00000555170 NSD2O96028 1365 aa11.55□□□□□ -0.56
TRIM9-204ENST00000555170 ANKRD24Q8TF21 1146 aa11.55□□□□□ -0.56
TRIM9-204ENST00000555170 SLC16A10Q8TF71 515 aa11.55□□□□□ -0.56
TRIM9-204ENST00000555170 IP6K1Q92551 441 aa11.55□□□□□ -0.56
TRIM9-204ENST00000555170 ACSBG1Q96GR2 724 aa11.55□□□□□ -0.56
TRIM9-204ENST00000555170 LRRC4BQ9NT99 713 aa11.55□□□□□ -0.56
TRIM9-204ENST00000555170 EMILIN1Q9Y6C2 1016 aa11.55□□□□□ -0.56
TRIM9-204ENST00000555170 SMG6Q86US8 1419 aaKnown RBP11.54□□□□□ -0.56
TRIM9-204ENST00000555170 EXOC5O00471 708 aa11.54□□□□□ -0.56
TRIM9-204ENST00000555170 CSB-PGBD3P0DP91 1061 aa11.54□□□□□ -0.56
TRIM9-204ENST00000555170 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
TRIM9-204ENST00000555170 CDCA7Q9BWT1 371 aaPredicted RBP11.54□□□□□ -0.56
TRIM9-204ENST00000555170 FLT4P35916 1363 aa11.54□□□□□ -0.56
TRIM9-204ENST00000555170 PER1O15534 1290 aaPredicted RBP11.53□□□□□ -0.56
TRIM9-204ENST00000555170 AMPHP49418 695 aa11.53□□□□□ -0.56
TRIM9-204ENST00000555170 AKT1S1Q96B36 256 aa11.53□□□□□ -0.56
TRIM9-204ENST00000555170 CARD10Q9BWT7 1032 aa11.53□□□□□ -0.56
TRIM9-204ENST00000555170 INSRP06213 1382 aa11.53□□□□□ -0.56
TRIM9-204ENST00000555170 KIF24Q5T7B8 1368 aa11.53□□□□□ -0.56
TRIM9-204ENST00000555170 KIF3CO14782 793 aa11.52□□□□□ -0.57
TRIM9-204ENST00000555170 TNNT2P45379 298 aaPredicted RBP11.52□□□□□ -0.57
TRIM9-204ENST00000555170 APLP1P51693 650 aa11.52□□□□□ -0.57
TRIM9-204ENST00000555170 LTV1Q96GA3 475 aaPredicted RBP11.52□□□□□ -0.57
TRIM9-204ENST00000555170 KNSTRNQ9Y448 316 aa11.52□□□□□ -0.57
TRIM9-204ENST00000555170 PAPPAQ13219 1627 aa11.52□□□□□ -0.57
TRIM9-204ENST00000555170 TNS2Q63HR2 1409 aa11.52□□□□□ -0.57
TRIM9-204ENST00000555170 PRELPP51888 382 aa11.51□□□□□ -0.57
TRIM9-204ENST00000555170 HSP90AB2PQ58FF8 381 aa11.51□□□□□ -0.57
TRIM9-204ENST00000555170 PNPLA7Q6ZV29 1317 aa11.51□□□□□ -0.57
TRIM9-204ENST00000555170 MEGF6O75095 1541 aa11.5□□□□□ -0.57
TRIM9-204ENST00000555170 NLRP2Q9NX02 1062 aa11.5□□□□□ -0.57
TRIM9-204ENST00000555170 POLKQ9UBT6 870 aa11.5□□□□□ -0.57
TRIM9-204ENST00000555170 ADCY9O60503 1353 aa11.5□□□□□ -0.57
TRIM9-204ENST00000555170 PKD1L3Q7Z443 1732 aa11.49□□□□□ -0.57
TRIM9-204ENST00000555170 MORC1Q86VD1 984 aa11.49□□□□□ -0.57
TRIM9-204ENST00000555170 TNS4Q8IZW8 715 aa11.49□□□□□ -0.57
TRIM9-204ENST00000555170 TFCP2L1Q9NZI6 479 aa11.49□□□□□ -0.57
TRIM9-204ENST00000555170 NCAPD2Q15021 1401 aa11.49□□□□□ -0.57
TRIM9-204ENST00000555170 PPM1GO15355 546 aaPredicted RBP11.48□□□□□ -0.57
TRIM9-204ENST00000555170 ZEB1P37275 1124 aaPredicted RBP11.48□□□□□ -0.57
TRIM9-204ENST00000555170 KCNQ4P56696 695 aa11.48□□□□□ -0.57
TRIM9-204ENST00000555170 CC2D1BQ5T0F9 858 aaKnown RBP11.48□□□□□ -0.57
TRIM9-204ENST00000555170 USHBP1Q8N6Y0 703 aa11.48□□□□□ -0.57
TRIM9-204ENST00000555170 NPC1L1Q9UHC9 1359 aa11.48□□□□□ -0.57
TRIM9-204ENST00000555170 DOT1LQ8TEK3 1739 aa11.48□□□□□ -0.57
TRIM9-204ENST00000555170 COL24A1Q17RW2 1714 aa11.47□□□□□ -0.57
TRIM9-204ENST00000555170 NHSQ6T4R5 1651 aa11.47□□□□□ -0.57
TRIM9-204ENST00000555170 NBPF6Q5VWK0 638 aa11.47□□□□□ -0.57
TRIM9-204ENST00000555170 NBPF4Q96M43 638 aa11.47□□□□□ -0.57
TRIM9-204ENST00000555170 IL2RBP14784 551 aa11.46□□□□□ -0.57
TRIM9-204ENST00000555170 CNGB1Q14028 1251 aaPredicted RBP11.46□□□□□ -0.57
TRIM9-204ENST00000555170 COL3A1P02461 1466 aaPredicted RBP11.45□□□□□ -0.58
TRIM9-204ENST00000555170 HTRA3P83110 453 aa11.45□□□□□ -0.58
TRIM9-204ENST00000555170 EIF4A2Q14240 407 aaKnown RBP11.45□□□□□ -0.58
TRIM9-204ENST00000555170 TOGARAM1Q9Y4F4 1720 aa11.45□□□□□ -0.58
TRIM9-204ENST00000555170 MSH5O43196 834 aa11.44□□□□□ -0.58
TRIM9-204ENST00000555170 SLC27A3Q5K4L6 730 aa11.44□□□□□ -0.58
TRIM9-204ENST00000555170 WWC3Q9ULE0 1092 aa11.44□□□□□ -0.58
TRIM9-204ENST00000555170 TOMM70O94826 608 aa11.43□□□□□ -0.58
TRIM9-204ENST00000555170 SLC34A2O95436 690 aa11.43□□□□□ -0.58
TRIM9-204ENST00000555170 MSL1Q68DK7 614 aa11.43□□□□□ -0.58
TRIM9-204ENST00000555170 COL23A1Q86Y22 540 aaPredicted RBP11.43□□□□□ -0.58
TRIM9-204ENST00000555170 JMYQ8N9B5 988 aa11.43□□□□□ -0.58
TRIM9-204ENST00000555170 KLRG1Q96E93 195 aa11.43□□□□□ -0.58
TRIM9-204ENST00000555170 CD2APQ9Y5K6 639 aa11.43□□□□□ -0.58
TRIM9-204ENST00000555170 BTAF1O14981 1849 aa11.43□□□□□ -0.58
TRIM9-204ENST00000555170 PCNTO95613 3336 aa11.43□□□□□ -0.58
TRIM9-204ENST00000555170 IGSF1Q8N6C5 1336 aa11.42□□□□□ -0.58
TRIM9-204ENST00000555170 EYA1Q99502 592 aa11.42□□□□□ -0.58
TRIM9-204ENST00000555170 MTHFSP49914 203 aa11.41□□□□□ -0.58
TRIM9-204ENST00000555170 QSER1Q2KHR3 1735 aa11.4□□□□□ -0.58
TRIM9-204ENST00000555170 ITGB4P16144 1822 aa11.4□□□□□ -0.58
TRIM9-204ENST00000555170 KAT6BQ8WYB5 2073 aa11.39□□□□□ -0.59
TRIM9-204ENST00000555170 TATP17735 454 aaPredicted RBP11.39□□□□□ -0.59
TRIM9-204ENST00000555170 IL13P35225 146 aa11.39□□□□□ -0.59
TRIM9-204ENST00000555170 DDX10Q13206 875 aaKnown RBP11.39□□□□□ -0.59
TRIM9-204ENST00000555170 RAPGEF4Q8WZA2 1011 aa11.39□□□□□ -0.59
TRIM9-204ENST00000555170 VIRMAQ69YN4 1812 aaKnown RBP11.39□□□□□ -0.59
TRIM9-204ENST00000555170 TUBGCP6Q96RT7 1819 aa11.39□□□□□ -0.59
TRIM9-204ENST00000555170 AEBP1Q8IUX7 1158 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms