RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 RNF20Q5VTR2 975 aa9.11□□□□□ -0.95
PSEN1-211ENST00000554995 SLC10A4Q96EP9 437 aa9.11□□□□□ -0.95
PSEN1-211ENST00000554995 SOWAHDA6NJG2 315 aa9.1□□□□□ -0.95
PSEN1-211ENST00000554995 POTECB2RU33 542 aa9.1□□□□□ -0.95
PSEN1-211ENST00000554995 E9PSI1 815 aa9.1□□□□□ -0.95
PSEN1-211ENST00000554995 S1PR4O95977 384 aa9.1□□□□□ -0.95
PSEN1-211ENST00000554995 SCNN1AP37088 669 aa9.1□□□□□ -0.95
PSEN1-211ENST00000554995 SEC13P55735 322 aa9.1□□□□□ -0.95
PSEN1-211ENST00000554995 CCDC102BQ68D86 513 aa9.1□□□□□ -0.95
PSEN1-211ENST00000554995 PPP1R18Q6NYC8 613 aa9.1□□□□□ -0.95
PSEN1-211ENST00000554995 FCF1Q9Y324 198 aaKnown RBP9.1□□□□□ -0.95
PSEN1-211ENST00000554995 TPCN2Q8NHX9 752 aa9.09□□□□□ -0.95
PSEN1-211ENST00000554995 C1QTNF2Q9BXJ5 285 aa9.09□□□□□ -0.95
PSEN1-211ENST00000554995 PRMT3O60678 531 aa9.08□□□□□ -0.96
PSEN1-211ENST00000554995 GGCXP38435 758 aa9.08□□□□□ -0.96
PSEN1-211ENST00000554995 NBPF20Q3BBV1 942 aa9.08□□□□□ -0.96
PSEN1-211ENST00000554995 C1orf216Q8TAB5 229 aa9.08□□□□□ -0.96
PSEN1-211ENST00000554995 NKX2-3Q8TAU0 364 aa9.08□□□□□ -0.96
PSEN1-211ENST00000554995 RBM19Q9Y4C8 960 aaKnown RBP9.08□□□□□ -0.96
PSEN1-211ENST00000554995 PCDHB11Q9Y5F2 797 aa9.08□□□□□ -0.96
PSEN1-211ENST00000554995 PCDHGA11Q9Y5H2 935 aa9.08□□□□□ -0.96
PSEN1-211ENST00000554995 SFI1A8K8P3 1242 aa9.07□□□□□ -0.96
PSEN1-211ENST00000554995 ESPNB1AK53 854 aa9.07□□□□□ -0.96
PSEN1-211ENST00000554995 PSME1Q06323 249 aa9.07□□□□□ -0.96
PSEN1-211ENST00000554995 USP4Q13107 963 aa9.06□□□□□ -0.96
PSEN1-211ENST00000554995 OCLNQ16625 522 aa9.06□□□□□ -0.96
PSEN1-211ENST00000554995 SIRT1Q96EB6 747 aa9.06□□□□□ -0.96
PSEN1-211ENST00000554995 PRIMPOLQ96LW4 560 aa9.06□□□□□ -0.96
PSEN1-211ENST00000554995 CXXC1Q9P0U4 656 aaPredicted RBP9.06□□□□□ -0.96
PSEN1-211ENST00000554995 SH3BP2P78314 561 aa9.05□□□□□ -0.96
PSEN1-211ENST00000554995 MYT1Q01538 1121 aa9.05□□□□□ -0.96
PSEN1-211ENST00000554995 DNAJC14Q6Y2X3 702 aaPredicted RBP9.05□□□□□ -0.96
PSEN1-211ENST00000554995 TRMT44Q8IYL2 757 aaKnown RBP9.05□□□□□ -0.96
PSEN1-211ENST00000554995 SEPT12Q8IYM1 358 aa9.05□□□□□ -0.96
PSEN1-211ENST00000554995 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.05□□□□□ -0.96
PSEN1-211ENST00000554995 CDV3Q9UKY7 258 aaKnown RBP9.05□□□□□ -0.96
PSEN1-211ENST00000554995 TAS1R3Q7RTX0 852 aa9.04□□□□□ -0.96
PSEN1-211ENST00000554995 CCDC125Q86Z20 511 aa9.04□□□□□ -0.96
PSEN1-211ENST00000554995 STK17AQ9UEE5 414 aa9.04□□□□□ -0.96
PSEN1-211ENST00000554995 BIN2Q9UBW5 565 aaPredicted RBP9.03□□□□□ -0.96
PSEN1-211ENST00000554995 RBM47A0AV96 593 aaKnown RBP9.02□□□□□ -0.97
PSEN1-211ENST00000554995 LGR5O75473 907 aa9.02□□□□□ -0.97
PSEN1-211ENST00000554995 ERCC3P19447 782 aa9.02□□□□□ -0.97
PSEN1-211ENST00000554995 RAB15P59190 212 aa9.02□□□□□ -0.97
PSEN1-211ENST00000554995 NOM1Q5C9Z4 860 aaKnown RBP9.02□□□□□ -0.97
PSEN1-211ENST00000554995 TRIM67Q6ZTA4 783 aa9.02□□□□□ -0.97
PSEN1-211ENST00000554995 UNCXA6NJT0 531 aa9.01□□□□□ -0.97
PSEN1-211ENST00000554995 MARSP56192 900 aaKnown RBP9.01□□□□□ -0.97
PSEN1-211ENST00000554995 KCTD15Q96SI1 283 aaPredicted RBP9.01□□□□□ -0.97
PSEN1-211ENST00000554995 HINFPQ9BQA5 517 aa9.01□□□□□ -0.97
PSEN1-211ENST00000554995 PPEF1O14829 653 aaPredicted RBP9□□□□□ -0.97
PSEN1-211ENST00000554995 ABL1P00519 1130 aa9□□□□□ -0.97
PSEN1-211ENST00000554995 ZNF211Q13398 564 aaPredicted RBP9□□□□□ -0.97
PSEN1-211ENST00000554995 EGFL7Q9UHF1 273 aa9□□□□□ -0.97
PSEN1-211ENST00000554995 MYCP01106 439 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-211ENST00000554995 TSEN2Q8NCE0 465 aaKnown RBP8.99□□□□□ -0.97
PSEN1-211ENST00000554995 H3BRB1 525 aa8.98□□□□□ -0.97
PSEN1-211ENST00000554995 M0R2N6 131 aa8.98□□□□□ -0.97
PSEN1-211ENST00000554995 ZBTB24O43167 697 aaPredicted RBP8.98□□□□□ -0.97
PSEN1-211ENST00000554995 SCTRP47872 440 aa8.98□□□□□ -0.97
PSEN1-211ENST00000554995 TRIM32Q13049 653 aa8.98□□□□□ -0.97
PSEN1-211ENST00000554995 INTS6LQ5JSJ4 861 aaKnown RBP8.98□□□□□ -0.97
PSEN1-211ENST00000554995 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.98□□□□□ -0.97
PSEN1-211ENST00000554995 MKNK1Q9BUB5 465 aa8.98□□□□□ -0.97
PSEN1-211ENST00000554995 TUT1Q9H6E5 874 aaKnown RBP8.98□□□□□ -0.97
PSEN1-211ENST00000554995 ANO2Q9NQ90 1003 aa8.98□□□□□ -0.97
PSEN1-211ENST00000554995 ICMTO60725 284 aa8.97□□□□□ -0.97
PSEN1-211ENST00000554995 WEE1P30291 646 aa8.97□□□□□ -0.97
PSEN1-211ENST00000554995 SEPT3Q9UH03 358 aa8.97□□□□□ -0.97
PSEN1-211ENST00000554995 MAP4K5Q9Y4K4 846 aa8.97□□□□□ -0.97
PSEN1-211ENST00000554995 ERVH48-1M5A8F1 160 aa8.96□□□□□ -0.98
PSEN1-211ENST00000554995 DGAT1O75907 488 aa8.96□□□□□ -0.98
PSEN1-211ENST00000554995 VARSP26640 1264 aaKnown RBP8.96□□□□□ -0.98
PSEN1-211ENST00000554995 SKOR1P84550 965 aa8.96□□□□□ -0.98
PSEN1-211ENST00000554995 FKBP5Q13451 457 aaPredicted RBP8.96□□□□□ -0.98
PSEN1-211ENST00000554995 PKDCCQ504Y2 493 aa8.96□□□□□ -0.98
PSEN1-211ENST00000554995 VASH1Q7L8A9 365 aaPredicted RBP8.96□□□□□ -0.98
PSEN1-211ENST00000554995 GTF3C2Q8WUA4 911 aaPredicted RBP8.96□□□□□ -0.98
PSEN1-211ENST00000554995 ZNF358Q9NW07 568 aa8.96□□□□□ -0.98
PSEN1-211ENST00000554995 PLA2G2CQ5R387 149 aa8.95□□□□□ -0.98
PSEN1-211ENST00000554995 GLYCTKQ8IVS8 523 aa8.95□□□□□ -0.98
PSEN1-211ENST00000554995 PURBQ96QR8 312 aaKnown RBP8.95□□□□□ -0.98
PSEN1-211ENST00000554995 ANKRD33BA6NCL7 494 aa8.94□□□□□ -0.98
PSEN1-211ENST00000554995 TMEM229AB2RXF0 380 aa8.94□□□□□ -0.98
PSEN1-211ENST00000554995 RNF223E7ERA6 249 aa8.94□□□□□ -0.98
PSEN1-211ENST00000554995 C21orf2O43822 256 aa8.94□□□□□ -0.98
PSEN1-211ENST00000554995 WNT7BP56706 349 aa8.94□□□□□ -0.98
PSEN1-211ENST00000554995 ERVK-9P63128 1117 aa8.94□□□□□ -0.98
PSEN1-211ENST00000554995 CAPN12Q6ZSI9 719 aa8.94□□□□□ -0.98
PSEN1-211ENST00000554995 GAS2L2Q8NHY3 880 aa8.94□□□□□ -0.98
PSEN1-211ENST00000554995 BCL2L13Q9BXK5 485 aa8.94□□□□□ -0.98
PSEN1-211ENST00000554995 DNMT3AQ9Y6K1 912 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-211ENST00000554995 CC2D2BQ6DHV5 1058 aa8.93□□□□□ -0.98
PSEN1-211ENST00000554995 NPAS4Q8IUM7 802 aa8.93□□□□□ -0.98
PSEN1-211ENST00000554995 WIPF1O43516 503 aa8.92□□□□□ -0.98
PSEN1-211ENST00000554995 PTCD1O75127 700 aaKnown RBP8.92□□□□□ -0.98
PSEN1-211ENST00000554995 ZNF16P17020 682 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-211ENST00000554995 MTMR3Q13615 1198 aa8.92□□□□□ -0.98
PSEN1-211ENST00000554995 ECM1Q16610 540 aa8.92□□□□□ -0.98
PSEN1-211ENST00000554995 ANKLE1Q8NAG6 615 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms