RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.01■□□□□ 0.31
SIX1-203ENST00000554986 COL5A2P05997 1499 aaPredicted RBP17.01■□□□□ 0.31
SIX1-203ENST00000554986 CDK12Q9NYV4 1490 aaPredicted RBP17■□□□□ 0.31
SIX1-203ENST00000554986 KIF24Q5T7B8 1368 aa17■□□□□ 0.31
SIX1-203ENST00000554986 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.99■□□□□ 0.31
SIX1-203ENST00000554986 C20orf194Q5TEA3 1177 aa16.98■□□□□ 0.31
SIX1-203ENST00000554986 PKNOX2Q96KN3 472 aa16.98■□□□□ 0.31
SIX1-203ENST00000554986 LTV1Q96GA3 475 aaPredicted RBP16.98■□□□□ 0.31
SIX1-203ENST00000554986 STRN4Q9NRL3 753 aa16.98■□□□□ 0.31
SIX1-203ENST00000554986 USP21Q9UK80 565 aa16.98■□□□□ 0.31
SIX1-203ENST00000554986 RGPD2P0DJD1 1756 aa16.98■□□□□ 0.31
SIX1-203ENST00000554986 UNC5CLQ8IV45 518 aa16.97■□□□□ 0.31
SIX1-203ENST00000554986 ANKRD24Q8TF21 1146 aa16.97■□□□□ 0.31
SIX1-203ENST00000554986 RRAGDQ9NQL2 400 aaPredicted RBP16.97■□□□□ 0.31
SIX1-203ENST00000554986 ERBB3P21860 1342 aa16.97■□□□□ 0.31
SIX1-203ENST00000554986 COL3A1P02461 1466 aaPredicted RBP16.97■□□□□ 0.31
SIX1-203ENST00000554986 BECN1Q14457 450 aa16.96■□□□□ 0.31
SIX1-203ENST00000554986 LARP1Q6PKG0 1096 aaKnown RBP16.96■□□□□ 0.31
SIX1-203ENST00000554986 RGS17Q9UGC6 210 aaPredicted RBP16.96■□□□□ 0.31
SIX1-203ENST00000554986 ZNF521Q96K83 1311 aa16.96■□□□□ 0.31
SIX1-203ENST00000554986 EVA1CP58658 441 aa16.95■□□□□ 0.3
SIX1-203ENST00000554986 DUSP27Q5VZP5 1158 aa16.95■□□□□ 0.3
SIX1-203ENST00000554986 WDR17Q8IZU2 1322 aa16.95■□□□□ 0.3
SIX1-203ENST00000554986 EIF4A2Q14240 407 aaKnown RBP16.95■□□□□ 0.3
SIX1-203ENST00000554986 FAM208AQ9UK61 1670 aaKnown RBP16.93■□□□□ 0.3
SIX1-203ENST00000554986 ATRNO75882 1429 aa16.93■□□□□ 0.3
SIX1-203ENST00000554986 CSB-PGBD3P0DP91 1061 aa16.93■□□□□ 0.3
SIX1-203ENST00000554986 CLCN1P35523 988 aa16.93■□□□□ 0.3
SIX1-203ENST00000554986 IL13P35225 146 aa16.92■□□□□ 0.3
SIX1-203ENST00000554986 RRP9O43818 475 aaKnown RBP16.91■□□□□ 0.3
SIX1-203ENST00000554986 VPS72Q15906 364 aa16.91■□□□□ 0.3
SIX1-203ENST00000554986 NBPF6Q5VWK0 638 aa16.91■□□□□ 0.3
SIX1-203ENST00000554986 NBPF4Q96M43 638 aa16.91■□□□□ 0.3
SIX1-203ENST00000554986 CRB1P82279 1406 aa16.91■□□□□ 0.3
SIX1-203ENST00000554986 RGPD1P0DJD0 1748 aa16.91■□□□□ 0.3
SIX1-203ENST00000554986 MAPK8IP3Q9UPT6 1336 aa16.91■□□□□ 0.3
SIX1-203ENST00000554986 ZNF772Q68DY9 489 aaPredicted RBP16.91■□□□□ 0.3
SIX1-203ENST00000554986 TOM1L2Q6ZVM7 507 aa16.91■□□□□ 0.3
SIX1-203ENST00000554986 FSD2A1L4K1 749 aa16.9■□□□□ 0.3
SIX1-203ENST00000554986 DIAPH1O60610 1272 aaKnown RBP16.9■□□□□ 0.3
SIX1-203ENST00000554986 GLI3P10071 1580 aa16.9■□□□□ 0.3
SIX1-203ENST00000554986 CFAP53Q96M91 514 aa16.9■□□□□ 0.3
SIX1-203ENST00000554986 ANTXR1Q9H6X2 564 aa16.9■□□□□ 0.3
SIX1-203ENST00000554986 QTRT2Q9H974 415 aaKnown RBP16.9■□□□□ 0.3
SIX1-203ENST00000554986 NLRP2Q9NX02 1062 aa16.9■□□□□ 0.3
SIX1-203ENST00000554986 TRPC5Q9UL62 973 aaPredicted RBP16.9■□□□□ 0.3
SIX1-203ENST00000554986 SPATA31A5Q5VU36 1347 aa16.9■□□□□ 0.3
SIX1-203ENST00000554986 SPATA31A7Q8IWB4 1347 aa16.9■□□□□ 0.3
SIX1-203ENST00000554986 TRMT2AQ8IZ69 625 aaKnown RBP16.89■□□□□ 0.3
SIX1-203ENST00000554986 USHBP1Q8N6Y0 703 aa16.89■□□□□ 0.3
SIX1-203ENST00000554986 EYA1Q99502 592 aa16.89■□□□□ 0.3
SIX1-203ENST00000554986 CCDC9Q9Y3X0 531 aaKnown RBP16.89■□□□□ 0.3
SIX1-203ENST00000554986 SPATA31A1Q5TZJ5 1347 aa16.89■□□□□ 0.29
SIX1-203ENST00000554986 POTEAQ6S8J7 498 aa16.89■□□□□ 0.29
SIX1-203ENST00000554986 GOLGA2Q08379 1002 aa16.88■□□□□ 0.29
SIX1-203ENST00000554986 CARD10Q9BWT7 1032 aa16.88■□□□□ 0.29
SIX1-203ENST00000554986 GJD4Q96KN9 370 aaPredicted RBP16.87■□□□□ 0.29
SIX1-203ENST00000554986 NCAPD2Q15021 1401 aa16.87■□□□□ 0.29
SIX1-203ENST00000554986 IGSF1Q8N6C5 1336 aa16.87■□□□□ 0.29
SIX1-203ENST00000554986 WNK3Q9BYP7 1800 aa16.86■□□□□ 0.29
SIX1-203ENST00000554986 RGS3P49796 1198 aa16.86■□□□□ 0.29
SIX1-203ENST00000554986 SLFN5Q08AF3 891 aa16.86■□□□□ 0.29
SIX1-203ENST00000554986 PNNQ9H307 717 aaKnown RBP16.86■□□□□ 0.29
SIX1-203ENST00000554986 U2SURPO15042 1029 aaKnown RBP16.85■□□□□ 0.29
SIX1-203ENST00000554986 AEBP1Q8IUX7 1158 aa16.85■□□□□ 0.29
SIX1-203ENST00000554986 ADAMTS8Q9UP79 889 aa16.85■□□□□ 0.29
SIX1-203ENST00000554986 TCP11L2Q8N4U5 519 aa16.84■□□□□ 0.29
SIX1-203ENST00000554986 GOLGA6L3A6NEY3 463 aa16.84■□□□□ 0.29
SIX1-203ENST00000554986 ISY1Q9ULR0 285 aaKnown RBP16.84■□□□□ 0.29
SIX1-203ENST00000554986 HMOX1P09601 288 aa16.83■□□□□ 0.28
SIX1-203ENST00000554986 XRCC6P12956 609 aaKnown RBP eCLIP16.83■□□□□ 0.28
SIX1-203ENST00000554986 FAM98CQ17RN3 349 aaKnown RBP16.83■□□□□ 0.28
SIX1-203ENST00000554986 SULT6B1Q6IMI4 303 aa16.83■□□□□ 0.28
SIX1-203ENST00000554986 MEGF6O75095 1541 aa16.82■□□□□ 0.28
SIX1-203ENST00000554986 HSP90AA1P07900 732 aaKnown RBP16.82■□□□□ 0.28
SIX1-203ENST00000554986 AAMPQ13685 434 aa16.82■□□□□ 0.28
SIX1-203ENST00000554986 NGEFQ8N5V2 710 aa16.82■□□□□ 0.28
SIX1-203ENST00000554986 DISP2A7MBM2 1401 aa16.82■□□□□ 0.28
SIX1-203ENST00000554986 RBM6P78332 1123 aaKnown RBP16.82■□□□□ 0.28
SIX1-203ENST00000554986 HSP90AA2PQ14568 343 aaPredicted RBP16.82■□□□□ 0.28
SIX1-203ENST00000554986 THRAP3Q9Y2W1 955 aaKnown RBP16.82■□□□□ 0.28
SIX1-203ENST00000554986 THSD7AQ9UPZ6 1657 aa16.82■□□□□ 0.28
SIX1-203ENST00000554986 KDRP35968 1356 aa16.82■□□□□ 0.28
SIX1-203ENST00000554986 U2AF1L5P0DN76 240 aaPredicted RBP16.81■□□□□ 0.28
SIX1-203ENST00000554986 U2AF1Q01081 240 aaKnown RBP eCLIP16.81■□□□□ 0.28
SIX1-203ENST00000554986 PDE3AQ14432 1141 aa16.81■□□□□ 0.28
SIX1-203ENST00000554986 BARGINQ6ZT62 677 aa16.81■□□□□ 0.28
SIX1-203ENST00000554986 RXRBP28702 533 aa16.8■□□□□ 0.28
SIX1-203ENST00000554986 IL2RBP14784 551 aa16.79■□□□□ 0.28
SIX1-203ENST00000554986 WDR43Q15061 677 aaKnown RBP eCLIP16.79■□□□□ 0.28
SIX1-203ENST00000554986 ZMYND15Q9H091 742 aa16.79■□□□□ 0.28
SIX1-203ENST00000554986 PARP4Q9UKK3 1724 aaKnown RBP16.79■□□□□ 0.28
SIX1-203ENST00000554986 LRRC37A3O60309 1634 aa16.79■□□□□ 0.28
SIX1-203ENST00000554986 ONECUT3O60422 494 aaPredicted RBP16.78■□□□□ 0.28
SIX1-203ENST00000554986 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
SIX1-203ENST00000554986 TBC1D32Q96NH3 1257 aa16.78■□□□□ 0.28
SIX1-203ENST00000554986 NAP1L5Q96NT1 182 aaPredicted RBP16.78■□□□□ 0.28
SIX1-203ENST00000554986 MRE11P49959 708 aa16.78■□□□□ 0.28
SIX1-203ENST00000554986 RAPGEF4Q8WZA2 1011 aa16.77■□□□□ 0.28
SIX1-203ENST00000554986 UPF2Q9HAU5 1272 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms