RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 MTERF4Q7Z6M4 381 aaKnown RBP4.79□□□□□ -1.64
LRFN5-204ENST00000554171 SPACA7Q96KW9 195 aa4.79□□□□□ -1.64
LRFN5-204ENST00000554171 SPOCK3Q9BQ16 436 aa4.79□□□□□ -1.64
LRFN5-204ENST00000554171 YIPF2Q9BWQ6 316 aa4.79□□□□□ -1.64
LRFN5-204ENST00000554171 CASS4Q9NQ75 786 aa4.79□□□□□ -1.64
LRFN5-204ENST00000554171 MKS1Q9NXB0 559 aa4.79□□□□□ -1.64
LRFN5-204ENST00000554171 IPO7O95373 1038 aaKnown RBP4.78□□□□□ -1.64
LRFN5-204ENST00000554171 OATP04181 439 aa4.78□□□□□ -1.64
LRFN5-204ENST00000554171 STIP1P31948 543 aaKnown RBP4.78□□□□□ -1.64
LRFN5-204ENST00000554171 GTF2F1P35269 517 aaKnown RBP eCLIP4.78□□□□□ -1.64
LRFN5-204ENST00000554171 SLC7A5Q01650 507 aa4.78□□□□□ -1.64
LRFN5-204ENST00000554171 DBX2Q6ZNG2 339 aa4.78□□□□□ -1.64
LRFN5-204ENST00000554171 ACRBPQ8NEB7 543 aa4.78□□□□□ -1.64
LRFN5-204ENST00000554171 CCDC97Q96F63 343 aaPredicted RBP4.78□□□□□ -1.64
LRFN5-204ENST00000554171 SUFUQ9UMX1 484 aa4.78□□□□□ -1.64
LRFN5-204ENST00000554171 MTA2O94776 668 aa4.78□□□□□ -1.64
LRFN5-204ENST00000554171 ATG7O95352 703 aa4.78□□□□□ -1.64
LRFN5-204ENST00000554171 LONRF1Q17RB8 773 aa4.78□□□□□ -1.64
LRFN5-204ENST00000554171 PDXDC1Q6P996 788 aa4.78□□□□□ -1.64
LRFN5-204ENST00000554171 C1orf131Q8NDD1 294 aaKnown RBP4.78□□□□□ -1.64
LRFN5-204ENST00000554171 CEP63Q96MT8 703 aa4.78□□□□□ -1.64
LRFN5-204ENST00000554171 YTHDC1Q96MU7 727 aaKnown RBP4.78□□□□□ -1.64
LRFN5-204ENST00000554171 FMNL2Q96PY5 1086 aa4.78□□□□□ -1.64
LRFN5-204ENST00000554171 IFT122Q9HBG6 1241 aa4.78□□□□□ -1.64
LRFN5-204ENST00000554171 PGAP2Q9UHJ9 254 aa4.78□□□□□ -1.64
LRFN5-204ENST00000554171 PPFIA2O75334 1257 aa4.78□□□□□ -1.64
LRFN5-204ENST00000554171 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.78□□□□□ -1.64
LRFN5-204ENST00000554171 NACC2Q96BF6 587 aa4.78□□□□□ -1.64
LRFN5-204ENST00000554171 PNNQ9H307 717 aaKnown RBP4.78□□□□□ -1.64
LRFN5-204ENST00000554171 ACAD8Q9UKU7 415 aa4.78□□□□□ -1.64
LRFN5-204ENST00000554171 ABL1P00519 1130 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 MYBL2P10244 700 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 SLC35B4Q969S0 331 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 RBSNQ9H1K0 784 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 TMEM63CQ9P1W3 806 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 TMEM110-MUSTN1A8MSY1 372 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 TPPPO94811 219 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 FILIP1Q7Z7B0 1213 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 SH3TC2Q8TF17 1288 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.77□□□□□ -1.65
LRFN5-204ENST00000554171 TBX22Q9Y458 520 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 PLEKHG3A1L390 1219 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 A6NJY4 79 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 SHROOM1Q2M3G4 852 aaPredicted RBP4.77□□□□□ -1.65
LRFN5-204ENST00000554171 NGDNQ8NEJ9 315 aaKnown RBP4.77□□□□□ -1.65
LRFN5-204ENST00000554171 KCNB2Q92953 911 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 RSPH9Q9H1X1 276 aaPredicted RBP4.77□□□□□ -1.65
LRFN5-204ENST00000554171 TMEM98Q9Y2Y6 226 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 F8VZ95 297 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 STK10O94804 968 aaKnown RBP4.77□□□□□ -1.65
LRFN5-204ENST00000554171 SRGNP10124 158 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 XPCQ01831 940 aaPredicted RBP4.77□□□□□ -1.65
LRFN5-204ENST00000554171 NFXL1Q6ZNB6 911 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 SLC16A10Q8TF71 515 aa4.77□□□□□ -1.65
LRFN5-204ENST00000554171 RNF123Q5XPI4 1314 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 PER1O15534 1290 aaPredicted RBP4.76□□□□□ -1.65
LRFN5-204ENST00000554171 RAPGEF3O95398 923 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 TRDNQ13061 729 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 TRIM74Q86UV6 250 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 TRIM73Q86UV7 250 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 TMEM151BQ8IW70 566 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 IL17RAQ96F46 866 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 OSBPL5Q9H0X9 879 aaPredicted RBP4.76□□□□□ -1.65
LRFN5-204ENST00000554171 CHPF2Q9P2E5 772 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 MORC2Q9Y6X9 1032 aaPredicted RBP4.76□□□□□ -1.65
LRFN5-204ENST00000554171 ABCC9O60706 1549 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 CCDC196A0A1B0GTZ2 297 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 H7C1W4 665 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 HOXC13P31276 330 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 SRPK2P78362 688 aaKnown RBP4.76□□□□□ -1.65
LRFN5-204ENST00000554171 BMS1Q14692 1282 aaKnown RBP4.76□□□□□ -1.65
LRFN5-204ENST00000554171 NKAIN3Q8N8D7 197 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 ODF2LQ9ULJ1 636 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 ZSCAN9O15535 394 aaPredicted RBP4.76□□□□□ -1.65
LRFN5-204ENST00000554171 ITGAEP38570 1179 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 CLASRPQ8N2M8 674 aaKnown RBP4.76□□□□□ -1.65
LRFN5-204ENST00000554171 PIK3R5Q8WYR1 880 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 UBXN4Q92575 508 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 VPS33BQ9H267 617 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 INCENPQ9NQS7 918 aa4.76□□□□□ -1.65
LRFN5-204ENST00000554171 TRIM6-TRIM34B2RNG4 842 aa4.75□□□□□ -1.65
LRFN5-204ENST00000554171 XRCC6P12956 609 aaKnown RBP eCLIP4.75□□□□□ -1.65
LRFN5-204ENST00000554171 NFKBIBQ15653 356 aa4.75□□□□□ -1.65
LRFN5-204ENST00000554171 KIAA1958Q8N8K9 716 aa4.75□□□□□ -1.65
LRFN5-204ENST00000554171 TBC1D5Q92609 795 aa4.75□□□□□ -1.65
LRFN5-204ENST00000554171 TRIM34Q9BYJ4 488 aa4.75□□□□□ -1.65
LRFN5-204ENST00000554171 BRINP2Q9C0B6 783 aa4.75□□□□□ -1.65
LRFN5-204ENST00000554171 TBX4P57082 545 aa4.75□□□□□ -1.65
LRFN5-204ENST00000554171 HSP90B2PQ58FF3 399 aa4.75□□□□□ -1.65
LRFN5-204ENST00000554171 NT5DC4Q86YG4 428 aa4.75□□□□□ -1.65
LRFN5-204ENST00000554171 ERCC4Q92889 916 aaPredicted RBP4.75□□□□□ -1.65
LRFN5-204ENST00000554171 GABBR1Q9UBS5 961 aa4.75□□□□□ -1.65
LRFN5-204ENST00000554171 BARX2Q9UMQ3 279 aaPredicted RBP4.75□□□□□ -1.65
LRFN5-204ENST00000554171 THRAP3Q9Y2W1 955 aaKnown RBP4.75□□□□□ -1.65
LRFN5-204ENST00000554171 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.75□□□□□ -1.65
LRFN5-204ENST00000554171 IMPDH2P12268 514 aa4.75□□□□□ -1.65
LRFN5-204ENST00000554171 E2F5Q15329 346 aa4.75□□□□□ -1.65
LRFN5-204ENST00000554171 SND1Q7KZF4 910 aaKnown RBP eCLIP4.75□□□□□ -1.65
LRFN5-204ENST00000554171 SMCR8Q8TEV9 937 aaPredicted RBP4.75□□□□□ -1.65
LRFN5-204ENST00000554171 PLSCR2Q9NRY7 297 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms