RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 PLCH1Q4KWH8 1693 aa14.16□□□□□ -0.14
PABPN1-203ENST00000553960 SPATA31A6Q5VVP1 1343 aa14.15□□□□□ -0.14
PABPN1-203ENST00000553960 PARP4Q9UKK3 1724 aaKnown RBP14.15□□□□□ -0.14
PABPN1-203ENST00000553960 UBAP1LF5GYI3 381 aa14.15□□□□□ -0.14
PABPN1-203ENST00000553960 AKAP4Q5JQC9 854 aa14.15□□□□□ -0.14
PABPN1-203ENST00000553960 FANCIQ9NVI1 1328 aa14.15□□□□□ -0.15
PABPN1-203ENST00000553960 FAM83GA6ND36 823 aa14.14□□□□□ -0.15
PABPN1-203ENST00000553960 SUPT16HQ9Y5B9 1047 aaKnown RBP14.14□□□□□ -0.15
PABPN1-203ENST00000553960 SLIT2O94813 1529 aa14.14□□□□□ -0.15
PABPN1-203ENST00000553960 CACNA1FO60840 1977 aa14.13□□□□□ -0.15
PABPN1-203ENST00000553960 ALDH1L2Q3SY69 923 aa14.13□□□□□ -0.15
PABPN1-203ENST00000553960 SALL2Q9Y467 1007 aaPredicted RBP14.13□□□□□ -0.15
PABPN1-203ENST00000553960 NRAPQ86VF7 1730 aa14.12□□□□□ -0.15
PABPN1-203ENST00000553960 MRC1P22897 1456 aa14.12□□□□□ -0.15
PABPN1-203ENST00000553960 SIPA1L3O60292 1781 aaPredicted RBP14.12□□□□□ -0.15
PABPN1-203ENST00000553960 NEUROD2Q15784 382 aa14.12□□□□□ -0.15
PABPN1-203ENST00000553960 CDCA7Q9BWT1 371 aaPredicted RBP14.12□□□□□ -0.15
PABPN1-203ENST00000553960 CHMP4AQ9BY43 222 aa14.12□□□□□ -0.15
PABPN1-203ENST00000553960 THRAP3Q9Y2W1 955 aaKnown RBP14.12□□□□□ -0.15
PABPN1-203ENST00000553960 DISP2A7MBM2 1401 aa14.12□□□□□ -0.15
PABPN1-203ENST00000553960 SCN11AQ9UI33 1791 aa14.11□□□□□ -0.15
PABPN1-203ENST00000553960 NEFLP07196 543 aa14.11□□□□□ -0.15
PABPN1-203ENST00000553960 RRP1P56182 461 aaKnown RBP14.11□□□□□ -0.15
PABPN1-203ENST00000553960 AAMPQ13685 434 aa14.11□□□□□ -0.15
PABPN1-203ENST00000553960 NKX1-1Q15270 411 aaPredicted RBP14.11□□□□□ -0.15
PABPN1-203ENST00000553960 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.11□□□□□ -0.15
PABPN1-203ENST00000553960 RAPGEF4Q8WZA2 1011 aa14.11□□□□□ -0.15
PABPN1-203ENST00000553960 RTF1Q92541 710 aaKnown RBP14.11□□□□□ -0.15
PABPN1-203ENST00000553960 SPG7Q9UQ90 795 aa14.11□□□□□ -0.15
PABPN1-203ENST00000553960 GTF3C3Q9Y5Q9 886 aa14.11□□□□□ -0.15
PABPN1-203ENST00000553960 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.1□□□□□ -0.15
PABPN1-203ENST00000553960 HSP90AB1P08238 724 aaKnown RBP14.1□□□□□ -0.15
PABPN1-203ENST00000553960 TATP17735 454 aaPredicted RBP14.1□□□□□ -0.15
PABPN1-203ENST00000553960 RARSP54136 660 aaKnown RBP14.1□□□□□ -0.15
PABPN1-203ENST00000553960 PDE3AQ14432 1141 aa14.1□□□□□ -0.15
PABPN1-203ENST00000553960 IL17REQ8NFR9 667 aa14.1□□□□□ -0.15
PABPN1-203ENST00000553960 MEGF6O75095 1541 aa14.1□□□□□ -0.15
PABPN1-203ENST00000553960 VIRMAQ69YN4 1812 aaKnown RBP14.09□□□□□ -0.15
PABPN1-203ENST00000553960 HOXB7P09629 217 aa14.09□□□□□ -0.15
PABPN1-203ENST00000553960 TAF7Q15545 349 aaPredicted RBP14.09□□□□□ -0.15
PABPN1-203ENST00000553960 CHRNA2Q15822 529 aa14.09□□□□□ -0.15
PABPN1-203ENST00000553960 LTV1Q96GA3 475 aaPredicted RBP14.09□□□□□ -0.15
PABPN1-203ENST00000553960 NLRP2Q9NX02 1062 aa14.09□□□□□ -0.15
PABPN1-203ENST00000553960 KDM3BQ7LBC6 1761 aa14.09□□□□□ -0.15
PABPN1-203ENST00000553960 HEG1Q9ULI3 1381 aa14.09□□□□□ -0.15
PABPN1-203ENST00000553960 FNBP4Q8N3X1 1017 aaPredicted RBP14.08□□□□□ -0.16
PABPN1-203ENST00000553960 ARHGAP45Q92619 1136 aa14.08□□□□□ -0.16
PABPN1-203ENST00000553960 MBIPQ9NS73 344 aa14.08□□□□□ -0.16
PABPN1-203ENST00000553960 LRP6O75581 1613 aa14.08□□□□□ -0.16
PABPN1-203ENST00000553960 WNK3Q9BYP7 1800 aa14.07□□□□□ -0.16
PABPN1-203ENST00000553960 VAMP4O75379 141 aa14.07□□□□□ -0.16
PABPN1-203ENST00000553960 IFNL2Q8IZJ0 200 aa14.07□□□□□ -0.16
PABPN1-203ENST00000553960 DCAF5Q96JK2 942 aa14.07□□□□□ -0.16
PABPN1-203ENST00000553960 SHANK3Q9BYB0 1731 aa14.07□□□□□ -0.16
PABPN1-203ENST00000553960 MS4A1P11836 297 aa14.06□□□□□ -0.16
PABPN1-203ENST00000553960 IL2RBP14784 551 aa14.06□□□□□ -0.16
PABPN1-203ENST00000553960 PHKG2P15735 406 aa14.06□□□□□ -0.16
PABPN1-203ENST00000553960 ZNF530Q6P9A1 599 aaPredicted RBP14.06□□□□□ -0.16
PABPN1-203ENST00000553960 BARGINQ6ZT62 677 aa14.06□□□□□ -0.16
PABPN1-203ENST00000553960 RNMTO43148 476 aaKnown RBP14.05□□□□□ -0.16
PABPN1-203ENST00000553960 EXOSC9Q06265 439 aaKnown RBP14.05□□□□□ -0.16
PABPN1-203ENST00000553960 C1orf141Q5JVX7 400 aa14.05□□□□□ -0.16
PABPN1-203ENST00000553960 USHBP1Q8N6Y0 703 aa14.05□□□□□ -0.16
PABPN1-203ENST00000553960 PCDH11XQ9BZA7 1347 aa14.05□□□□□ -0.16
PABPN1-203ENST00000553960 PCDH11YQ9BZA8 1340 aa14.05□□□□□ -0.16
PABPN1-203ENST00000553960 CSB-PGBD3P0DP91 1061 aa14.04□□□□□ -0.16
PABPN1-203ENST00000553960 TOM1L2Q6ZVM7 507 aa14.04□□□□□ -0.16
PABPN1-203ENST00000553960 BTG4Q9NY30 223 aa14.04□□□□□ -0.16
PABPN1-203ENST00000553960 KIF16BQ96L93 1317 aa14.04□□□□□ -0.16
PABPN1-203ENST00000553960 ERVV-2B6SEH9 535 aa14.03□□□□□ -0.16
PABPN1-203ENST00000553960 CYP27B1O15528 508 aa14.03□□□□□ -0.16
PABPN1-203ENST00000553960 LARP1Q6PKG0 1096 aaKnown RBP14.03□□□□□ -0.16
PABPN1-203ENST00000553960 MCM10Q7L590 875 aa14.03□□□□□ -0.16
PABPN1-203ENST00000553960 ZCRB1Q8TBF4 217 aaKnown RBP14.03□□□□□ -0.16
PABPN1-203ENST00000553960 TSR2Q969E8 191 aaKnown RBP14.03□□□□□ -0.16
PABPN1-203ENST00000553960 KDM6AO15550 1401 aaPredicted RBP14.03□□□□□ -0.16
PABPN1-203ENST00000553960 BCL9LQ86UU0 1499 aa14.02□□□□□ -0.16
PABPN1-203ENST00000553960 SPATA31A1Q5TZJ5 1347 aa14.02□□□□□ -0.17
PABPN1-203ENST00000553960 SPATA31A5Q5VU36 1347 aa14.02□□□□□ -0.17
PABPN1-203ENST00000553960 SPATA31A7Q8IWB4 1347 aa14.02□□□□□ -0.17
PABPN1-203ENST00000553960 EVA1CP58658 441 aa14.02□□□□□ -0.17
PABPN1-203ENST00000553960 PIP4K2BP78356 416 aa14.02□□□□□ -0.17
PABPN1-203ENST00000553960 THUMPD2Q9BTF0 503 aaKnown RBP14.02□□□□□ -0.17
PABPN1-203ENST00000553960 IBTKQ9P2D0 1353 aaPredicted RBP14.01□□□□□ -0.17
PABPN1-203ENST00000553960 ZBTB7CA1YPR0 619 aa14.01□□□□□ -0.17
PABPN1-203ENST00000553960 IPO8O15397 1037 aaKnown RBP14.01□□□□□ -0.17
PABPN1-203ENST00000553960 DCTN1Q14203 1278 aa14.01□□□□□ -0.17
PABPN1-203ENST00000553960 VPS72Q15906 364 aa14.01□□□□□ -0.17
PABPN1-203ENST00000553960 TWISTNBQ3B726 338 aaPredicted RBP14.01□□□□□ -0.17
PABPN1-203ENST00000553960 BCL9O00512 1426 aa14□□□□□ -0.17
PABPN1-203ENST00000553960 TNS2Q63HR2 1409 aa14□□□□□ -0.17
PABPN1-203ENST00000553960 SENP3-EIF4A1A0A087X0R7 540 aa14□□□□□ -0.17
PABPN1-203ENST00000553960 FKBP8Q14318 412 aa14□□□□□ -0.17
PABPN1-203ENST00000553960 UNC5CLQ8IV45 518 aa14□□□□□ -0.17
PABPN1-203ENST00000553960 SSH1Q8WYL5 1049 aa14□□□□□ -0.17
PABPN1-203ENST00000553960 SLC52A2Q9HAB3 445 aa14□□□□□ -0.17
PABPN1-203ENST00000553960 PPP4R2Q9NY27 417 aa14□□□□□ -0.17
PABPN1-203ENST00000553960 TEFQ10587 303 aa13.99□□□□□ -0.17
PABPN1-203ENST00000553960 C8orf58Q8NAV2 365 aa13.99□□□□□ -0.17
PABPN1-203ENST00000553960 LGR6Q9HBX8 967 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms