RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 PLEKHF1Q96S99 279 aa24.05■■□□□ 1.44
PSEN1-208ENST00000553719 CDCA7Q9BWT1 371 aaPredicted RBP24.05■■□□□ 1.44
PSEN1-208ENST00000553719 TNS2Q63HR2 1409 aa24.03■■□□□ 1.44
PSEN1-208ENST00000553719 PRKAR2BP31323 418 aa24.03■■□□□ 1.44
PSEN1-208ENST00000553719 FAM98CQ17RN3 349 aaKnown RBP24.03■■□□□ 1.44
PSEN1-208ENST00000553719 RAPGEF4Q8WZA2 1011 aa24.02■■□□□ 1.44
PSEN1-208ENST00000553719 TATP17735 454 aaPredicted RBP24■■□□□ 1.43
PSEN1-208ENST00000553719 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24■■□□□ 1.436e-6■□□□□ 8.9
PSEN1-208ENST00000553719 RGS12O14924 1447 aa24■■□□□ 1.43
PSEN1-208ENST00000553719 RXRBP28702 533 aa23.99■■□□□ 1.43
PSEN1-208ENST00000553719 PHACTR3Q96KR7 559 aa23.99■■□□□ 1.43
PSEN1-208ENST00000553719 BRWD3Q6RI45 1802 aa23.98■■□□□ 1.43
PSEN1-208ENST00000553719 FAM9BQ8IZU0 186 aa23.97■■□□□ 1.43
PSEN1-208ENST00000553719 AMOTQ4VCS5 1084 aa23.95■■□□□ 1.42
PSEN1-208ENST00000553719 SEPT12Q8IYM1 358 aa23.95■■□□□ 1.42
PSEN1-208ENST00000553719 RUNDC1Q96C34 613 aa23.95■■□□□ 1.42
PSEN1-208ENST00000553719 PNNQ9H307 717 aaKnown RBP23.95■■□□□ 1.42
PSEN1-208ENST00000553719 MTHFSDQ2M296 383 aaKnown RBP23.94■■□□□ 1.42
PSEN1-208ENST00000553719 CCDC146Q8IYE0 955 aa23.94■■□□□ 1.42
PSEN1-208ENST00000553719 ZCRB1Q8TBF4 217 aaKnown RBP23.94■■□□□ 1.42
PSEN1-208ENST00000553719 ADAMTS7Q9UKP4 1686 aa23.94■■□□□ 1.42
PSEN1-208ENST00000553719 DDB1Q16531 1140 aa23.93■■□□□ 1.42
PSEN1-208ENST00000553719 PLEKHO1Q53GL0 409 aaPredicted RBP23.93■■□□□ 1.42
PSEN1-208ENST00000553719 DLG5Q8TDM6 1919 aa23.92■■□□□ 1.42
PSEN1-208ENST00000553719 PCDH11XQ9BZA7 1347 aa23.92■■□□□ 1.42
PSEN1-208ENST00000553719 PCDH11YQ9BZA8 1340 aa23.92■■□□□ 1.42
PSEN1-208ENST00000553719 CYP27B1O15528 508 aa23.92■■□□□ 1.42
PSEN1-208ENST00000553719 EXOC5O00471 708 aa23.91■■□□□ 1.42
PSEN1-208ENST00000553719 SPG7Q9UQ90 795 aa23.91■■□□□ 1.42
PSEN1-208ENST00000553719 MAPK8IP3Q9UPT6 1336 aa23.9■■□□□ 1.42
PSEN1-208ENST00000553719 MARCH10Q8NA82 808 aaPredicted RBP23.89■■□□□ 1.41
PSEN1-208ENST00000553719 GAS2L2Q8NHY3 880 aa23.89■■□□□ 1.41
PSEN1-208ENST00000553719 TOGARAM1Q9Y4F4 1720 aa23.88■■□□□ 1.41
PSEN1-208ENST00000553719 BCL9O00512 1426 aa23.88■■□□□ 1.41
PSEN1-208ENST00000553719 PHKG2P15735 406 aa23.88■■□□□ 1.41
PSEN1-208ENST00000553719 NFE2L2Q16236 605 aa23.88■■□□□ 1.41
PSEN1-208ENST00000553719 ZNF530Q6P9A1 599 aaPredicted RBP23.88■■□□□ 1.41
PSEN1-208ENST00000553719 NKX1-1Q15270 411 aaPredicted RBP23.87■■□□□ 1.41
PSEN1-208ENST00000553719 VIRMAQ69YN4 1812 aaKnown RBP23.87■■□□□ 1.41
PSEN1-208ENST00000553719 KDM6AO15550 1401 aaPredicted RBP23.86■■□□□ 1.41
PSEN1-208ENST00000553719 EP400Q96L91 3159 aa23.86■■□□□ 1.41
PSEN1-208ENST00000553719 A0A0G2JS52 829 aa23.86■■□□□ 1.41
PSEN1-208ENST00000553719 TMPOP42166 694 aaKnown RBP23.86■■□□□ 1.41
PSEN1-208ENST00000553719 MYT1Q01538 1121 aa23.86■■□□□ 1.41
PSEN1-208ENST00000553719 IFNL2Q8IZJ0 200 aa23.86■■□□□ 1.41
PSEN1-208ENST00000553719 MAP3K5Q99683 1374 aa23.86■■□□□ 1.41
PSEN1-208ENST00000553719 SCN11AQ9UI33 1791 aa23.86■■□□□ 1.41
PSEN1-208ENST00000553719 APAF1O14727 1248 aa23.85■■□□□ 1.41
PSEN1-208ENST00000553719 NEFMP07197 916 aa23.85■■□□□ 1.41
PSEN1-208ENST00000553719 AKAP4Q5JQC9 854 aa23.85■■□□□ 1.41
PSEN1-208ENST00000553719 NCBP3Q53F19 620 aaKnown RBP23.83■■□□□ 1.41
PSEN1-208ENST00000553719 KRT27Q7Z3Y8 459 aa23.83■■□□□ 1.41
PSEN1-208ENST00000553719 DDX54Q8TDD1 881 aaKnown RBP23.83■■□□□ 1.41
PSEN1-208ENST00000553719 MRC1P22897 1456 aa23.82■■□□□ 1.4
PSEN1-208ENST00000553719 DOT1LQ8TEK3 1739 aa23.82■■□□□ 1.4
PSEN1-208ENST00000553719 PDE3BQ13370 1112 aa23.82■■□□□ 1.4
PSEN1-208ENST00000553719 CEMIPQ8WUJ3 1361 aa23.81■■□□□ 1.4
PSEN1-208ENST00000553719 GNAT3A8MTJ3 354 aa23.81■■□□□ 1.4
PSEN1-208ENST00000553719 C1orf141Q5JVX7 400 aa23.81■■□□□ 1.4
PSEN1-208ENST00000553719 RRP7AQ9Y3A4 280 aaKnown RBP23.81■■□□□ 1.4
PSEN1-208ENST00000553719 SBF2Q86WG5 1849 aa23.8■■□□□ 1.4
PSEN1-208ENST00000553719 HTATSF1O43719 755 aaKnown RBP23.8■■□□□ 1.4
PSEN1-208ENST00000553719 TRIM35Q9UPQ4 493 aa23.8■■□□□ 1.4
PSEN1-208ENST00000553719 SIPA1L3O60292 1781 aaPredicted RBP23.79■■□□□ 1.4
PSEN1-208ENST00000553719 RIPK4P57078 832 aa23.79■■□□□ 1.4
PSEN1-208ENST00000553719 DCAF5Q96JK2 942 aa23.79■■□□□ 1.4
PSEN1-208ENST00000553719 NHSQ6T4R5 1651 aa23.79■■□□□ 1.4
PSEN1-208ENST00000553719 HSP90AB1P08238 724 aaKnown RBP23.78■■□□□ 1.4
PSEN1-208ENST00000553719 CCDC27Q2M243 656 aa23.78■■□□□ 1.4
PSEN1-208ENST00000553719 MPRIPQ6WCQ1 1025 aa23.77■■□□□ 1.4
PSEN1-208ENST00000553719 IL17REQ8NFR9 667 aa23.77■■□□□ 1.4
PSEN1-208ENST00000553719 ITGB4P16144 1822 aa23.77■■□□□ 1.4
PSEN1-208ENST00000553719 RNMTO43148 476 aaKnown RBP23.76■■□□□ 1.39
PSEN1-208ENST00000553719 FAM182BQ5T319 152 aa23.76■■□□□ 1.39
PSEN1-208ENST00000553719 NGEFQ8N5V2 710 aa23.75■■□□□ 1.39
PSEN1-208ENST00000553719 LGR6Q9HBX8 967 aa23.75■■□□□ 1.39
PSEN1-208ENST00000553719 NEUROD2Q15784 382 aa23.74■■□□□ 1.39
PSEN1-208ENST00000553719 ZNF521Q96K83 1311 aa23.74■■□□□ 1.39
PSEN1-208ENST00000553719 SENP3-EIF4A1A0A087X0R7 540 aa23.73■■□□□ 1.39
PSEN1-208ENST00000553719 LMOD3Q0VAK6 560 aa23.73■■□□□ 1.39
PSEN1-208ENST00000553719 DCTN1Q14203 1278 aa23.73■■□□□ 1.39
PSEN1-208ENST00000553719 MCM10Q7L590 875 aa23.73■■□□□ 1.39
PSEN1-208ENST00000553719 ERVV-2B6SEH9 535 aa23.72■■□□□ 1.39
PSEN1-208ENST00000553719 FAM196AQ6ZSG2 479 aa23.72■■□□□ 1.39
PSEN1-208ENST00000553719 PAPPAQ13219 1627 aa23.72■■□□□ 1.39
PSEN1-208ENST00000553719 WWC1Q8IX03 1113 aa23.71■■□□□ 1.39
PSEN1-208ENST00000553719 RTF1Q92541 710 aaKnown RBP23.71■■□□□ 1.39
PSEN1-208ENST00000553719 THUMPD2Q9BTF0 503 aaKnown RBP23.7■■□□□ 1.38
PSEN1-208ENST00000553719 SLC52A2Q9HAB3 445 aa23.69■■□□□ 1.38
PSEN1-208ENST00000553719 TNS1Q9HBL0 1735 aaKnown RBP23.69■■□□□ 1.38
PSEN1-208ENST00000553719 BTAF1O14981 1849 aa23.68■■□□□ 1.38
PSEN1-208ENST00000553719 KDM3BQ7LBC6 1761 aa23.67■■□□□ 1.38
PSEN1-208ENST00000553719 KCNQ2O43526 872 aa23.66■■□□□ 1.38
PSEN1-208ENST00000553719 PRIM1P49642 420 aaKnown RBP23.66■■□□□ 1.38
PSEN1-208ENST00000553719 HNRNPUQ00839 825 aaKnown RBP eCLIP23.66■■□□□ 1.38
PSEN1-208ENST00000553719 PTF1AQ7RTS3 328 aa23.66■■□□□ 1.38
PSEN1-208ENST00000553719 ACSBG1Q96GR2 724 aa23.66■■□□□ 1.38
PSEN1-208ENST00000553719 SALL2Q9Y467 1007 aaPredicted RBP23.65■■□□□ 1.38
PSEN1-208ENST00000553719 UBR2Q8IWV8 1755 aa23.65■■□□□ 1.38
PSEN1-208ENST00000553719 CABP4P57796 275 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms