RNA–Protein interactions for RNA: ENST00000552774.1

PDE1B-208, Transcript of phosphodiesterase 1B, humanhuman

TSL 4

Gene PDE1B, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-208ENST00000552774 U2AF1Q01081 240 aaKnown RBP eCLIP16.28■□□□□ 0.2
PDE1B-208ENST00000552774 PDE3BQ13370 1112 aa16.28■□□□□ 0.2
PDE1B-208ENST00000552774 KRT27Q7Z3Y8 459 aa16.28■□□□□ 0.2
PDE1B-208ENST00000552774 TNS2Q63HR2 1409 aa16.28■□□□□ 0.2
PDE1B-208ENST00000552774 ZCRB1Q8TBF4 217 aaKnown RBP16.27■□□□□ 0.2
PDE1B-208ENST00000552774 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.27■□□□□ 0.2
PDE1B-208ENST00000552774 ILDR2Q71H61 639 aa16.26■□□□□ 0.19
PDE1B-208ENST00000552774 FCHSD2O94868 740 aa16.25■□□□□ 0.19
PDE1B-208ENST00000552774 CCDC184Q52MB2 194 aa16.25■□□□□ 0.19
PDE1B-208ENST00000552774 MRS2Q9HD23 443 aa16.25■□□□□ 0.19
PDE1B-208ENST00000552774 SPG7Q9UQ90 795 aa16.25■□□□□ 0.19
PDE1B-208ENST00000552774 WDR43Q15061 677 aaKnown RBP eCLIP16.24■□□□□ 0.19
PDE1B-208ENST00000552774 PLEKHO1Q53GL0 409 aaPredicted RBP16.24■□□□□ 0.19
PDE1B-208ENST00000552774 RSPH6AQ9H0K4 717 aa16.24■□□□□ 0.19
PDE1B-208ENST00000552774 PKD1L3Q7Z443 1732 aa16.23■□□□□ 0.19
PDE1B-208ENST00000552774 AMOTQ4VCS5 1084 aa16.23■□□□□ 0.19
PDE1B-208ENST00000552774 PCDH11XQ9BZA7 1347 aa16.22■□□□□ 0.19
PDE1B-208ENST00000552774 PCDH11YQ9BZA8 1340 aa16.22■□□□□ 0.19
PDE1B-208ENST00000552774 PRKAR2BP31323 418 aa16.22■□□□□ 0.19
PDE1B-208ENST00000552774 MARCH10Q8NA82 808 aaPredicted RBP16.22■□□□□ 0.19
PDE1B-208ENST00000552774 DDX54Q8TDD1 881 aaKnown RBP16.22■□□□□ 0.19
PDE1B-208ENST00000552774 PNNQ9H307 717 aaKnown RBP16.22■□□□□ 0.19
PDE1B-208ENST00000552774 SHANK3Q9BYB0 1731 aa16.21■□□□□ 0.19
PDE1B-208ENST00000552774 CCER2I3L3R5 266 aa16.2■□□□□ 0.18
PDE1B-208ENST00000552774 NEFMP07197 916 aa16.2■□□□□ 0.18
PDE1B-208ENST00000552774 FAM182BQ5T319 152 aa16.2■□□□□ 0.18
PDE1B-208ENST00000552774 FAM196AQ6ZSG2 479 aa16.2■□□□□ 0.18
PDE1B-208ENST00000552774 CYP27B1O15528 508 aa16.19■□□□□ 0.18
PDE1B-208ENST00000552774 ZNF530Q6P9A1 599 aaPredicted RBP16.19■□□□□ 0.18
PDE1B-208ENST00000552774 IFNL2Q8IZJ0 200 aa16.19■□□□□ 0.18
PDE1B-208ENST00000552774 PNISRQ8TF01 805 aaKnown RBP16.19■□□□□ 0.18
PDE1B-208ENST00000552774 ADAMTS8Q9UP79 889 aa16.19■□□□□ 0.18
PDE1B-208ENST00000552774 BCL9O00512 1426 aa16.19■□□□□ 0.18
PDE1B-208ENST00000552774 MIER1Q8N108 512 aa16.18■□□□□ 0.18
PDE1B-208ENST00000552774 PLEKHF1Q96S99 279 aa16.18■□□□□ 0.18
PDE1B-208ENST00000552774 PHKG2P15735 406 aa16.17■□□□□ 0.18
PDE1B-208ENST00000552774 MTHFSDQ2M296 383 aaKnown RBP16.17■□□□□ 0.18
PDE1B-208ENST00000552774 C1orf141Q5JVX7 400 aa16.17■□□□□ 0.18
PDE1B-208ENST00000552774 GAS2L2Q8NHY3 880 aa16.17■□□□□ 0.18
PDE1B-208ENST00000552774 PHACTR3Q96KR7 559 aa16.17■□□□□ 0.18
PDE1B-208ENST00000552774 NKX1-1Q15270 411 aaPredicted RBP16.16■□□□□ 0.18
PDE1B-208ENST00000552774 MAPK8IP3Q9UPT6 1336 aa16.16■□□□□ 0.18
PDE1B-208ENST00000552774 HSP90AB1P08238 724 aaKnown RBP16.15■□□□□ 0.18
PDE1B-208ENST00000552774 AKAP4Q5JQC9 854 aa16.15■□□□□ 0.18
PDE1B-208ENST00000552774 KAT6BQ8WYB5 2073 aa16.15■□□□□ 0.18
PDE1B-208ENST00000552774 RUNDC1Q96C34 613 aa16.14■□□□□ 0.17
PDE1B-208ENST00000552774 SBF2Q86WG5 1849 aa16.13■□□□□ 0.17
PDE1B-208ENST00000552774 CCDC146Q8IYE0 955 aa16.13■□□□□ 0.17
PDE1B-208ENST00000552774 DCAF5Q96JK2 942 aa16.13■□□□□ 0.17
PDE1B-208ENST00000552774 GNAT3A8MTJ3 354 aa16.11■□□□□ 0.17
PDE1B-208ENST00000552774 TRIM37O94972 964 aa16.11■□□□□ 0.17
PDE1B-208ENST00000552774 NFE2L2Q16236 605 aa16.11■□□□□ 0.17
PDE1B-208ENST00000552774 CCDC125Q86Z20 511 aa16.11■□□□□ 0.17
PDE1B-208ENST00000552774 FAM9BQ8IZU0 186 aa16.11■□□□□ 0.17
PDE1B-208ENST00000552774 ACSBG1Q96GR2 724 aa16.11■□□□□ 0.17
PDE1B-208ENST00000552774 EP400Q96L91 3159 aa16.11■□□□□ 0.17
PDE1B-208ENST00000552774 MAP3K5Q99683 1374 aa16.11■□□□□ 0.17
PDE1B-208ENST00000552774 PRIM1P49642 420 aaKnown RBP16.1■□□□□ 0.17
PDE1B-208ENST00000552774 MPRIPQ6WCQ1 1025 aa16.1■□□□□ 0.17
PDE1B-208ENST00000552774 BCL11BQ9C0K0 894 aaPredicted RBP16.1■□□□□ 0.17
PDE1B-208ENST00000552774 DOT1LQ8TEK3 1739 aa16.1■□□□□ 0.17
PDE1B-208ENST00000552774 KDM6AO15550 1401 aaPredicted RBP16.1■□□□□ 0.17
PDE1B-208ENST00000552774 NHSQ6T4R5 1651 aa16.09■□□□□ 0.17
PDE1B-208ENST00000552774 ERVV-2B6SEH9 535 aa16.09■□□□□ 0.17
PDE1B-208ENST00000552774 KCNQ2O43526 872 aa16.09■□□□□ 0.17
PDE1B-208ENST00000552774 UPF1Q92900 1129 aaKnown RBP eCLIP16.09■□□□□ 0.17
PDE1B-208ENST00000552774 SCN11AQ9UI33 1791 aa16.08■□□□□ 0.17
PDE1B-208ENST00000552774 RNMTO43148 476 aaKnown RBP16.08■□□□□ 0.16
PDE1B-208ENST00000552774 HTATSF1O43719 755 aaKnown RBP16.08■□□□□ 0.16
PDE1B-208ENST00000552774 TMPOP42166 694 aaKnown RBP16.08■□□□□ 0.16
PDE1B-208ENST00000552774 SF3B2Q13435 895 aaKnown RBP16.08■□□□□ 0.16
PDE1B-208ENST00000552774 RTF1Q92541 710 aaKnown RBP16.08■□□□□ 0.16
PDE1B-208ENST00000552774 SYTL4Q96C24 671 aaPredicted RBP16.08■□□□□ 0.16
PDE1B-208ENST00000552774 TOGARAM1Q9Y4F4 1720 aa16.08■□□□□ 0.16
PDE1B-208ENST00000552774 LGR6Q9HBX8 967 aa16.07■□□□□ 0.16
PDE1B-208ENST00000552774 DLG5Q8TDM6 1919 aa16.07■□□□□ 0.16
PDE1B-208ENST00000552774 ITGB4P16144 1822 aa16.06■□□□□ 0.16
PDE1B-208ENST00000552774 VIRMAQ69YN4 1812 aaKnown RBP16.06■□□□□ 0.16
PDE1B-208ENST00000552774 ADAMTS7Q9UKP4 1686 aa16.06■□□□□ 0.16
PDE1B-208ENST00000552774 APAF1O14727 1248 aa16.06■□□□□ 0.16
PDE1B-208ENST00000552774 RIPK4P57078 832 aa16.06■□□□□ 0.16
PDE1B-208ENST00000552774 CABP4P57796 275 aa16.06■□□□□ 0.16
PDE1B-208ENST00000552774 PTF1AQ7RTS3 328 aa16.06■□□□□ 0.16
PDE1B-208ENST00000552774 IL17REQ8NFR9 667 aa16.06■□□□□ 0.16
PDE1B-208ENST00000552774 TMOD3Q9NYL9 352 aa16.06■□□□□ 0.16
PDE1B-208ENST00000552774 TNS1Q9HBL0 1735 aaKnown RBP16.05■□□□□ 0.16
PDE1B-208ENST00000552774 LMOD3Q0VAK6 560 aa16.05■□□□□ 0.16
PDE1B-208ENST00000552774 RRP7AQ9Y3A4 280 aaKnown RBP16.05■□□□□ 0.16
PDE1B-208ENST00000552774 CEMIPQ8WUJ3 1361 aa16.04■□□□□ 0.16
PDE1B-208ENST00000552774 BTAF1O14981 1849 aa16.04■□□□□ 0.16
PDE1B-208ENST00000552774 SOCS7O14512 581 aa16.04■□□□□ 0.16
PDE1B-208ENST00000552774 APBA3O96018 575 aa16.04■□□□□ 0.16
PDE1B-208ENST00000552774 NEUROD2Q15784 382 aa16.04■□□□□ 0.16
PDE1B-208ENST00000552774 PIGBQ92521 554 aa16.04■□□□□ 0.16
PDE1B-208ENST00000552774 SLC52A2Q9HAB3 445 aa16.04■□□□□ 0.16
PDE1B-208ENST00000552774 BAG6P46379 1132 aa16.03■□□□□ 0.16
PDE1B-208ENST00000552774 TEFQ10587 303 aa16.03■□□□□ 0.16
PDE1B-208ENST00000552774 MCM10Q7L590 875 aa16.03■□□□□ 0.16
PDE1B-208ENST00000552774 NFATC2IPQ8NCF5 419 aa16.03■□□□□ 0.16
PDE1B-208ENST00000552774 MRC1P22897 1456 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms