RNA–Protein interactions for RNA: ENST00000552442.1

UBE2N-206, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 5 BASIC

Gene UBE2N, Length 607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-206ENST00000552442 ZC3H6P61129 1189 aaKnown RBP12.74□□□□□ -0.37
UBE2N-206ENST00000552442 CCER1Q8TC90 406 aaPredicted RBP12.74□□□□□ -0.37
UBE2N-206ENST00000552442 UPF1Q92900 1129 aaKnown RBP eCLIP12.74□□□□□ -0.37
UBE2N-206ENST00000552442 CPDO75976 1380 aa12.73□□□□□ -0.37
UBE2N-206ENST00000552442 CHRNA2Q15822 529 aa12.73□□□□□ -0.37
UBE2N-206ENST00000552442 MICALL2Q8IY33 904 aa12.73□□□□□ -0.37
UBE2N-206ENST00000552442 EP400Q96L91 3159 aa12.73□□□□□ -0.37
UBE2N-206ENST00000552442 CD163L1Q9NR16 1453 aa12.72□□□□□ -0.37
UBE2N-206ENST00000552442 LTN1O94822 1766 aa12.72□□□□□ -0.37
UBE2N-206ENST00000552442 COL18A1P39060 1754 aa12.72□□□□□ -0.37
UBE2N-206ENST00000552442 TTC21BQ7Z4L5 1316 aa12.72□□□□□ -0.37
UBE2N-206ENST00000552442 TTC21AQ8NDW8 1320 aa12.72□□□□□ -0.37
UBE2N-206ENST00000552442 TMC1Q8TDI8 760 aa12.72□□□□□ -0.37
UBE2N-206ENST00000552442 TESK2Q96S53 571 aa12.72□□□□□ -0.37
UBE2N-206ENST00000552442 THSD7AQ9UPZ6 1657 aa12.71□□□□□ -0.37
UBE2N-206ENST00000552442 CAMTA1Q9Y6Y1 1673 aa12.71□□□□□ -0.37
UBE2N-206ENST00000552442 SLC24A1O60721 1099 aa12.71□□□□□ -0.37
UBE2N-206ENST00000552442 GCP02774 474 aa12.71□□□□□ -0.37
UBE2N-206ENST00000552442 PUS7Q96PZ0 661 aaKnown RBP12.71□□□□□ -0.37
UBE2N-206ENST00000552442 WNK3Q9BYP7 1800 aa12.7□□□□□ -0.38
UBE2N-206ENST00000552442 HDGFL2Q7Z4V5 671 aaPredicted RBP12.7□□□□□ -0.38
UBE2N-206ENST00000552442 NINLQ9Y2I6 1382 aa12.69□□□□□ -0.38
UBE2N-206ENST00000552442 SPATA31A5Q5VU36 1347 aa12.69□□□□□ -0.38
UBE2N-206ENST00000552442 SPATA31A7Q8IWB4 1347 aa12.69□□□□□ -0.38
UBE2N-206ENST00000552442 NFAT5O94916 1531 aa12.69□□□□□ -0.38
UBE2N-206ENST00000552442 A0A0G2JS52 829 aa12.69□□□□□ -0.38
UBE2N-206ENST00000552442 MYT1Q01538 1121 aa12.69□□□□□ -0.38
UBE2N-206ENST00000552442 C3orf67Q6ZVT6 689 aa12.69□□□□□ -0.38
UBE2N-206ENST00000552442 SEPT12Q8IYM1 358 aa12.69□□□□□ -0.38
UBE2N-206ENST00000552442 SLC12A5Q9H2X9 1139 aa12.69□□□□□ -0.38
UBE2N-206ENST00000552442 STRN4Q9NRL3 753 aa12.69□□□□□ -0.38
UBE2N-206ENST00000552442 EDC4Q6P2E9 1401 aaKnown RBP12.69□□□□□ -0.38
UBE2N-206ENST00000552442 A0A1W2PP64 1363 aa12.69□□□□□ -0.38
UBE2N-206ENST00000552442 MYOM1P52179 1685 aa12.68□□□□□ -0.38
UBE2N-206ENST00000552442 KIF20BQ96Q89 1820 aa12.68□□□□□ -0.38
UBE2N-206ENST00000552442 ZBTB7CA1YPR0 619 aa12.68□□□□□ -0.38
UBE2N-206ENST00000552442 ONECUT3O60422 494 aaPredicted RBP12.68□□□□□ -0.38
UBE2N-206ENST00000552442 FAM98CQ17RN3 349 aaKnown RBP12.68□□□□□ -0.38
UBE2N-206ENST00000552442 TMEM121BQ9BXQ6 578 aaPredicted RBP12.68□□□□□ -0.38
UBE2N-206ENST00000552442 TERF2IPQ9NYB0 399 aa12.68□□□□□ -0.38
UBE2N-206ENST00000552442 COL5A2P05997 1499 aaPredicted RBP12.67□□□□□ -0.38
UBE2N-206ENST00000552442 EVA1CP58658 441 aa12.67□□□□□ -0.38
UBE2N-206ENST00000552442 TMF1P82094 1093 aa12.67□□□□□ -0.38
UBE2N-206ENST00000552442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.67□□□□□ -0.38
UBE2N-206ENST00000552442 SPATA31A1Q5TZJ5 1347 aa12.66□□□□□ -0.38
UBE2N-206ENST00000552442 POTEB2H3BUK9 544 aa12.66□□□□□ -0.38
UBE2N-206ENST00000552442 MAMSTRQ6ZN01 415 aa12.66□□□□□ -0.38
UBE2N-206ENST00000552442 KCNH5Q8NCM2 988 aa12.66□□□□□ -0.38
UBE2N-206ENST00000552442 ABCC6O95255 1503 aa12.66□□□□□ -0.38
UBE2N-206ENST00000552442 AATKQ6ZMQ8 1374 aa12.66□□□□□ -0.38
UBE2N-206ENST00000552442 USP31Q70CQ4 1352 aa12.66□□□□□ -0.38
UBE2N-206ENST00000552442 RGPD1P0DJD0 1748 aa12.65□□□□□ -0.38
UBE2N-206ENST00000552442 PARP4Q9UKK3 1724 aaKnown RBP12.65□□□□□ -0.38
UBE2N-206ENST00000552442 KRT27Q7Z3Y8 459 aa12.65□□□□□ -0.38
UBE2N-206ENST00000552442 NME9Q86XW9 330 aa12.65□□□□□ -0.38
UBE2N-206ENST00000552442 SCUBE2Q9NQ36 999 aa12.65□□□□□ -0.38
UBE2N-206ENST00000552442 LHX8Q68G74 356 aa12.64□□□□□ -0.39
UBE2N-206ENST00000552442 LARP1Q6PKG0 1096 aaKnown RBP12.64□□□□□ -0.39
UBE2N-206ENST00000552442 CDCA8Q53HL2 280 aa12.63□□□□□ -0.39
UBE2N-206ENST00000552442 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.63□□□□□ -0.39
UBE2N-206ENST00000552442 USP35Q9P2H5 1018 aa12.63□□□□□ -0.39
UBE2N-206ENST00000552442 ANKRD36BQ8N2N9 1353 aa12.63□□□□□ -0.39
UBE2N-206ENST00000552442 OVOS2A0A0J9YW53 1432 aa12.62□□□□□ -0.39
UBE2N-206ENST00000552442 BLMP54132 1417 aaPredicted RBP12.62□□□□□ -0.39
UBE2N-206ENST00000552442 CRB1P82279 1406 aa12.62□□□□□ -0.39
UBE2N-206ENST00000552442 OVOS2Q6IE36 1432 aa12.62□□□□□ -0.39
UBE2N-206ENST00000552442 ARHGEF25Q86VW2 580 aa12.62□□□□□ -0.39
UBE2N-206ENST00000552442 CCDC125Q86Z20 511 aa12.62□□□□□ -0.39
UBE2N-206ENST00000552442 TNS1Q9HBL0 1735 aaKnown RBP12.62□□□□□ -0.39
UBE2N-206ENST00000552442 POTEJP0CG39 1038 aa12.61□□□□□ -0.39
UBE2N-206ENST00000552442 TCP11L2Q8N4U5 519 aa12.61□□□□□ -0.39
UBE2N-206ENST00000552442 LRRC37A3O60309 1634 aa12.61□□□□□ -0.39
UBE2N-206ENST00000552442 FAM208AQ9UK61 1670 aaKnown RBP12.61□□□□□ -0.39
UBE2N-206ENST00000552442 BARGINQ6ZT62 677 aa12.6□□□□□ -0.39
UBE2N-206ENST00000552442 TSHZ2Q9NRE2 1034 aa12.6□□□□□ -0.39
UBE2N-206ENST00000552442 WDR17Q8IZU2 1322 aa12.6□□□□□ -0.39
UBE2N-206ENST00000552442 TOM1L2Q6ZVM7 507 aa12.59□□□□□ -0.39
UBE2N-206ENST00000552442 AXIN2Q9Y2T1 843 aa12.59□□□□□ -0.39
UBE2N-206ENST00000552442 THRAP3Q9Y2W1 955 aaKnown RBP12.59□□□□□ -0.39
UBE2N-206ENST00000552442 SBF2Q86WG5 1849 aa12.59□□□□□ -0.39
UBE2N-206ENST00000552442 EIF4G2P78344 907 aaKnown RBP eCLIP12.58□□□□□ -0.4
UBE2N-206ENST00000552442 SF3B2Q13435 895 aaKnown RBP12.58□□□□□ -0.4
UBE2N-206ENST00000552442 RGPD2P0DJD1 1756 aa12.58□□□□□ -0.4
UBE2N-206ENST00000552442 ANKRD26Q9UPS8 1709 aa12.57□□□□□ -0.4
UBE2N-206ENST00000552442 CSB-PGBD3P0DP91 1061 aa12.57□□□□□ -0.4
UBE2N-206ENST00000552442 FAM182BQ5T319 152 aa12.57□□□□□ -0.4
UBE2N-206ENST00000552442 COG3Q96JB2 828 aa12.57□□□□□ -0.4
UBE2N-206ENST00000552442 PEAK1Q9H792 1746 aa12.57□□□□□ -0.4
UBE2N-206ENST00000552442 HSPA5P11021 654 aaKnown RBP12.56□□□□□ -0.4
UBE2N-206ENST00000552442 PDE3BQ13370 1112 aa12.56□□□□□ -0.4
UBE2N-206ENST00000552442 KAT6BQ8WYB5 2073 aa12.56□□□□□ -0.4
UBE2N-206ENST00000552442 MAP2P11137 1827 aaKnown RBP12.55□□□□□ -0.4
UBE2N-206ENST00000552442 NSD3Q9BZ95 1437 aa12.55□□□□□ -0.4
UBE2N-206ENST00000552442 TMC2Q8TDI7 906 aa12.55□□□□□ -0.4
UBE2N-206ENST00000552442 POLR3GLQ9BT43 218 aa12.55□□□□□ -0.4
UBE2N-206ENST00000552442 CCDC7Q96M83 1385 aa12.55□□□□□ -0.4
UBE2N-206ENST00000552442 FAM196AQ6ZSG2 479 aa12.54□□□□□ -0.4
UBE2N-206ENST00000552442 DEFB132Q7Z7B7 95 aa12.54□□□□□ -0.4
UBE2N-206ENST00000552442 CARD10Q9BWT7 1032 aa12.54□□□□□ -0.4
UBE2N-206ENST00000552442 ERBB3P21860 1342 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms