RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-208ENST00000551855 DBN1Q16643 649 aa6.43□□□□□ -1.38
CPNE8-208ENST00000551855 HMX1Q9NP08 348 aaPredicted RBP6.43□□□□□ -1.38
CPNE8-208ENST00000551855 ZC3H4Q9UPT8 1303 aaKnown RBP6.43□□□□□ -1.38
CPNE8-208ENST00000551855 IGF1RP08069 1367 aa6.43□□□□□ -1.38
CPNE8-208ENST00000551855 ESPNB1AK53 854 aa6.42□□□□□ -1.38
CPNE8-208ENST00000551855 SPOCK3Q9BQ16 436 aa6.42□□□□□ -1.38
CPNE8-208ENST00000551855 CYLDQ9NQC7 956 aa6.42□□□□□ -1.38
CPNE8-208ENST00000551855 TIMELESSQ9UNS1 1208 aa6.42□□□□□ -1.38
CPNE8-208ENST00000551855 GPSM3Q9Y4H4 160 aa6.42□□□□□ -1.38
CPNE8-208ENST00000551855 MSTNO14793 375 aa6.41□□□□□ -1.38
CPNE8-208ENST00000551855 PROCP04070 461 aa6.41□□□□□ -1.38
CPNE8-208ENST00000551855 RNF144AP50876 292 aaPredicted RBP6.41□□□□□ -1.38
CPNE8-208ENST00000551855 NBPF20Q3BBV1 942 aa6.41□□□□□ -1.38
CPNE8-208ENST00000551855 DZIP3Q86Y13 1208 aaKnown RBP6.41□□□□□ -1.38
CPNE8-208ENST00000551855 ACDQ96AP0 544 aa6.41□□□□□ -1.38
CPNE8-208ENST00000551855 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.41□□□□□ -1.38
CPNE8-208ENST00000551855 MBIPQ9NS73 344 aa6.41□□□□□ -1.38
CPNE8-208ENST00000551855 AP1G2O75843 785 aa6.4□□□□□ -1.38
CPNE8-208ENST00000551855 RIPOR1Q6ZS17 1223 aa6.4□□□□□ -1.38
CPNE8-208ENST00000551855 TRIM22Q8IYM9 498 aa6.4□□□□□ -1.38
CPNE8-208ENST00000551855 ENAMQ9NRM1 1142 aa6.4□□□□□ -1.38
CPNE8-208ENST00000551855 BCRP11274 1271 aa6.39□□□□□ -1.39
CPNE8-208ENST00000551855 SKIV2LQ15477 1246 aaKnown RBP6.39□□□□□ -1.39
CPNE8-208ENST00000551855 PPP2R2DQ66LE6 453 aa6.39□□□□□ -1.39
CPNE8-208ENST00000551855 NEDD1Q8NHV4 660 aa6.39□□□□□ -1.39
CPNE8-208ENST00000551855 GTPBP3Q969Y2 492 aaKnown RBP6.39□□□□□ -1.39
CPNE8-208ENST00000551855 PHF20L1A8MW92 1017 aa6.38□□□□□ -1.39
CPNE8-208ENST00000551855 POU4F2Q12837 409 aa6.38□□□□□ -1.39
CPNE8-208ENST00000551855 BEND7Q8N7W2 519 aaPredicted RBP6.38□□□□□ -1.39
CPNE8-208ENST00000551855 MEN1O00255 615 aa6.37□□□□□ -1.39
CPNE8-208ENST00000551855 GAS2L1Q99501 681 aaPredicted RBP6.37□□□□□ -1.39
CPNE8-208ENST00000551855 A0A1W2PRU2 124 aa6.36□□□□□ -1.39
CPNE8-208ENST00000551855 ATP5J2-PTCD1G3V325 749 aa6.36□□□□□ -1.39
CPNE8-208ENST00000551855 GIGYF1O75420 1035 aaPredicted RBP6.36□□□□□ -1.39
CPNE8-208ENST00000551855 USP17L8P0C7I0 530 aa6.36□□□□□ -1.39
CPNE8-208ENST00000551855 SNRPNP63162 240 aaKnown RBP6.36□□□□□ -1.39
CPNE8-208ENST00000551855 SH3D19Q5HYK7 790 aa6.36□□□□□ -1.39
CPNE8-208ENST00000551855 GMCL1Q96IK5 515 aa6.36□□□□□ -1.39
CPNE8-208ENST00000551855 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.35□□□□□ -1.39
CPNE8-208ENST00000551855 THBS1P07996 1170 aa6.35□□□□□ -1.39
CPNE8-208ENST00000551855 FAM117AQ9C073 453 aa6.35□□□□□ -1.39
CPNE8-208ENST00000551855 ATP1B4Q9UN42 357 aaPredicted RBP6.35□□□□□ -1.39
CPNE8-208ENST00000551855 DYRK1BQ9Y463 629 aa6.35□□□□□ -1.39
CPNE8-208ENST00000551855 GTF3C3Q9Y5Q9 886 aa6.35□□□□□ -1.39
CPNE8-208ENST00000551855 KRBA1A5PL33 1030 aa6.34□□□□□ -1.39
CPNE8-208ENST00000551855 GPC1P35052 558 aa6.34□□□□□ -1.39
CPNE8-208ENST00000551855 FOXR1Q6PIV2 292 aa6.34□□□□□ -1.39
CPNE8-208ENST00000551855 C1orf229Q6ZS94 237 aaPredicted RBP6.34□□□□□ -1.39
CPNE8-208ENST00000551855 PODNQ7Z5L7 613 aa6.34□□□□□ -1.39
CPNE8-208ENST00000551855 KRTAP9-2Q9BYQ4 174 aa6.34□□□□□ -1.39
CPNE8-208ENST00000551855 GPBP1L1Q9HC44 474 aaPredicted RBP6.34□□□□□ -1.39
CPNE8-208ENST00000551855 OIP5O43482 229 aa6.33□□□□□ -1.4
CPNE8-208ENST00000551855 MX2P20592 715 aa6.33□□□□□ -1.4
CPNE8-208ENST00000551855 SEPT12Q8IYM1 358 aa6.33□□□□□ -1.4
CPNE8-208ENST00000551855 GALNT6Q8NCL4 622 aa6.33□□□□□ -1.4
CPNE8-208ENST00000551855 TRIM34Q9BYJ4 488 aa6.33□□□□□ -1.4
CPNE8-208ENST00000551855 GRIP2Q9C0E4 1043 aa6.33□□□□□ -1.4
CPNE8-208ENST00000551855 SHISA8B8ZZ34 492 aa6.32□□□□□ -1.4
CPNE8-208ENST00000551855 H7C1W4 665 aa6.32□□□□□ -1.4
CPNE8-208ENST00000551855 SCTRP47872 440 aa6.32□□□□□ -1.4
CPNE8-208ENST00000551855 SLC27A3Q5K4L6 730 aa6.32□□□□□ -1.4
CPNE8-208ENST00000551855 NBPF10Q6P3W6 841 aaKnown RBP6.32□□□□□ -1.4
CPNE8-208ENST00000551855 NBPF15Q8N660 670 aa6.32□□□□□ -1.4
CPNE8-208ENST00000551855 PSMG3-AS1Q96PY0 264 aa6.32□□□□□ -1.4
CPNE8-208ENST00000551855 KRTAP9-6A0A140TA67 174 aa6.31□□□□□ -1.4
CPNE8-208ENST00000551855 K7ELQ4 463 aaPredicted RBP6.31□□□□□ -1.4
CPNE8-208ENST00000551855 COL8A1P27658 744 aa6.31□□□□□ -1.4
CPNE8-208ENST00000551855 BAG6P46379 1132 aa6.31□□□□□ -1.4
CPNE8-208ENST00000551855 ERVK-9P63128 1117 aa6.31□□□□□ -1.4
CPNE8-208ENST00000551855 TRERF1Q96PN7 1200 aa6.31□□□□□ -1.4
CPNE8-208ENST00000551855 PCDHB9Q9Y5E1 797 aa6.31□□□□□ -1.4
CPNE8-208ENST00000551855 FURINP09958 794 aa6.3□□□□□ -1.4
CPNE8-208ENST00000551855 FBXO45P0C2W1 286 aa6.3□□□□□ -1.4
CPNE8-208ENST00000551855 CC2D2BQ6DHV5 1058 aa6.3□□□□□ -1.4
CPNE8-208ENST00000551855 PNMA1Q8ND90 353 aa6.3□□□□□ -1.4
CPNE8-208ENST00000551855 NLRP3Q96P20 1036 aa6.3□□□□□ -1.4
CPNE8-208ENST00000551855 NUCKS1Q9H1E3 243 aaKnown RBP6.3□□□□□ -1.4
CPNE8-208ENST00000551855 KDM4CQ9H3R0 1056 aa6.3□□□□□ -1.4
CPNE8-208ENST00000551855 SPATA31C2B4DYI2 1134 aa6.29□□□□□ -1.4
CPNE8-208ENST00000551855 RFC5P40937 340 aa6.29□□□□□ -1.4
CPNE8-208ENST00000551855 KLRG1Q96E93 195 aa6.29□□□□□ -1.4
CPNE8-208ENST00000551855 OXCT2Q9BYC2 517 aaPredicted RBP6.29□□□□□ -1.4
CPNE8-208ENST00000551855 OSBPL3Q9H4L5 887 aa6.29□□□□□ -1.4
CPNE8-208ENST00000551855 TIMMDC1Q9NPL8 285 aa6.29□□□□□ -1.4
CPNE8-208ENST00000551855 LRRC4BQ9NT99 713 aa6.29□□□□□ -1.4
CPNE8-208ENST00000551855 ZBBXA8MT70 800 aa6.28□□□□□ -1.4
CPNE8-208ENST00000551855 F11P03951 625 aa6.28□□□□□ -1.4
CPNE8-208ENST00000551855 CLN3Q13286 438 aa6.28□□□□□ -1.4
CPNE8-208ENST00000551855 Q8N3U1 123 aa6.28□□□□□ -1.4
CPNE8-208ENST00000551855 SUV39H2Q9H5I1 410 aa6.28□□□□□ -1.4
CPNE8-208ENST00000551855 ARHGEF10LQ9HCE6 1279 aa6.28□□□□□ -1.4
CPNE8-208ENST00000551855 RAB6BQ9NRW1 208 aa6.28□□□□□ -1.4
CPNE8-208ENST00000551855 HOXB4P17483 251 aaPredicted RBP6.27□□□□□ -1.41
CPNE8-208ENST00000551855 PHKA2P46019 1235 aa6.27□□□□□ -1.41
CPNE8-208ENST00000551855 UBAP2LQ14157 1087 aaKnown RBP6.27□□□□□ -1.41
CPNE8-208ENST00000551855 TAS1R3Q7RTX0 852 aa6.27□□□□□ -1.41
CPNE8-208ENST00000551855 GJD4Q96KN9 370 aaPredicted RBP6.27□□□□□ -1.41
CPNE8-208ENST00000551855 GPAMQ9HCL2 828 aa6.27□□□□□ -1.41
CPNE8-208ENST00000551855 NSFL1CQ9UNZ2 370 aaKnown RBP6.27□□□□□ -1.41
CPNE8-208ENST00000551855 WASLO00401 505 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms