RNA–Protein interactions for RNA: ENST00000551088.1

TMTC3-204, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 3

Gene TMTC3, Length 646 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-204ENST00000551088 FAM161AQ3B820 660 aa13.94□□□□□ -0.18
TMTC3-204ENST00000551088 TMEM134Q9H6X4 195 aa13.94□□□□□ -0.18
TMTC3-204ENST00000551088 NCOA3Q9Y6Q9 1424 aa13.93□□□□□ -0.18
TMTC3-204ENST00000551088 TULP1O00294 542 aaPredicted RBP13.93□□□□□ -0.18
TMTC3-204ENST00000551088 ATF3P18847 181 aa13.93□□□□□ -0.18
TMTC3-204ENST00000551088 ZNF326Q5BKZ1 582 aaKnown RBP13.93□□□□□ -0.18
TMTC3-204ENST00000551088 POTEAQ6S8J7 498 aa13.93□□□□□ -0.18
TMTC3-204ENST00000551088 PIK3R4Q99570 1358 aa13.93□□□□□ -0.18
TMTC3-204ENST00000551088 JCADQ9P266 1359 aa13.93□□□□□ -0.18
TMTC3-204ENST00000551088 NRXN3Q9Y4C0 1643 aa13.93□□□□□ -0.18
TMTC3-204ENST00000551088 SHPRHQ149N8 1683 aa13.92□□□□□ -0.18
TMTC3-204ENST00000551088 PPP1R18Q6NYC8 613 aa13.92□□□□□ -0.18
TMTC3-204ENST00000551088 AMOTL2Q9Y2J4 779 aa13.92□□□□□ -0.18
TMTC3-204ENST00000551088 GTF3C3Q9Y5Q9 886 aa13.92□□□□□ -0.18
TMTC3-204ENST00000551088 CLTCL1P53675 1640 aa13.91□□□□□ -0.18
TMTC3-204ENST00000551088 XRN1Q8IZH2 1706 aaKnown RBP13.91□□□□□ -0.18
TMTC3-204ENST00000551088 C19orf44Q9H6X5 657 aa13.91□□□□□ -0.18
TMTC3-204ENST00000551088 TESPA1A2RU30 521 aaPredicted RBP13.9□□□□□ -0.18
TMTC3-204ENST00000551088 RCCD1A6NED2 376 aa13.9□□□□□ -0.18
TMTC3-204ENST00000551088 AHDC1Q5TGY3 1603 aaPredicted RBP13.9□□□□□ -0.19
TMTC3-204ENST00000551088 PTPRUQ92729 1446 aa13.9□□□□□ -0.19
TMTC3-204ENST00000551088 SETBP1Q9Y6X0 1596 aa13.89□□□□□ -0.19
TMTC3-204ENST00000551088 MEX3CQ5U5Q3 659 aaKnown RBP13.89□□□□□ -0.19
TMTC3-204ENST00000551088 SMYD5Q6GMV2 418 aa13.89□□□□□ -0.19
TMTC3-204ENST00000551088 NKX2-3Q8TAU0 364 aa13.89□□□□□ -0.19
TMTC3-204ENST00000551088 PCDHB3Q9Y5E6 796 aa13.89□□□□□ -0.19
TMTC3-204ENST00000551088 RBM26Q5T8P6 1007 aaKnown RBP13.88□□□□□ -0.19
TMTC3-204ENST00000551088 PRKD2Q9BZL6 878 aa13.87□□□□□ -0.19
TMTC3-204ENST00000551088 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.87□□□□□ -0.19
TMTC3-204ENST00000551088 TIMELESSQ9UNS1 1208 aa13.87□□□□□ -0.19
TMTC3-204ENST00000551088 NALCNQ8IZF0 1738 aa13.87□□□□□ -0.19
TMTC3-204ENST00000551088 NHSL1Q5SYE7 1610 aa13.86□□□□□ -0.19
TMTC3-204ENST00000551088 ZPR1O75312 459 aa13.86□□□□□ -0.19
TMTC3-204ENST00000551088 HIC1Q14526 733 aa13.86□□□□□ -0.19
TMTC3-204ENST00000551088 SPATA31A6Q5VVP1 1343 aa13.86□□□□□ -0.19
TMTC3-204ENST00000551088 NEXMIFQ5QGS0 1516 aa13.85□□□□□ -0.19
TMTC3-204ENST00000551088 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.85□□□□□ -0.19
TMTC3-204ENST00000551088 GGCXP38435 758 aa13.85□□□□□ -0.19
TMTC3-204ENST00000551088 LRP6O75581 1613 aa13.85□□□□□ -0.19
TMTC3-204ENST00000551088 PPLO60437 1756 aa13.84□□□□□ -0.19
TMTC3-204ENST00000551088 OATP04181 439 aa13.84□□□□□ -0.19
TMTC3-204ENST00000551088 TMEM132AQ24JP5 1023 aa13.84□□□□□ -0.19
TMTC3-204ENST00000551088 KMT5BQ4FZB7 885 aa13.84□□□□□ -0.19
TMTC3-204ENST00000551088 Q6ZNB5 142 aa13.84□□□□□ -0.19
TMTC3-204ENST00000551088 DCCP43146 1447 aa13.83□□□□□ -0.2
TMTC3-204ENST00000551088 CFHP08603 1231 aa13.83□□□□□ -0.2
TMTC3-204ENST00000551088 BLOC1S3Q6QNY0 202 aa13.83□□□□□ -0.2
TMTC3-204ENST00000551088 BRINP3Q76B58 766 aa13.83□□□□□ -0.2
TMTC3-204ENST00000551088 TRIM52Q96A61 297 aa13.83□□□□□ -0.2
TMTC3-204ENST00000551088 ASXL1Q8IXJ9 1541 aa13.83□□□□□ -0.2
TMTC3-204ENST00000551088 METP08581 1390 aa13.83□□□□□ -0.2
TMTC3-204ENST00000551088 RRBP1Q9P2E9 1410 aaKnown RBP13.82□□□□□ -0.2
TMTC3-204ENST00000551088 NUTM2BA6NNL0 878 aaPredicted RBP13.82□□□□□ -0.2
TMTC3-204ENST00000551088 NUTM2EB1AL46 878 aaPredicted RBP13.82□□□□□ -0.2
TMTC3-204ENST00000551088 NUTM2AQ8IVF1 878 aaPredicted RBP13.82□□□□□ -0.2
TMTC3-204ENST00000551088 PXYLP1Q8TE99 480 aa13.82□□□□□ -0.2
TMTC3-204ENST00000551088 NAIPQ13075 1403 aa13.81□□□□□ -0.2
TMTC3-204ENST00000551088 ZNF772Q68DY9 489 aaPredicted RBP13.81□□□□□ -0.2
TMTC3-204ENST00000551088 MST1RQ04912 1400 aa13.81□□□□□ -0.2
TMTC3-204ENST00000551088 ACTN4O43707 911 aaKnown RBP13.8□□□□□ -0.2
TMTC3-204ENST00000551088 LAPTM4AQ15012 233 aa13.8□□□□□ -0.2
TMTC3-204ENST00000551088 METTL3Q86U44 580 aaKnown RBP13.79□□□□□ -0.2
TMTC3-204ENST00000551088 V9GY48 417 aaPredicted RBP13.79□□□□□ -0.2
TMTC3-204ENST00000551088 ADGRL3Q9HAR2 1447 aa13.79□□□□□ -0.2
TMTC3-204ENST00000551088 GNPATO15228 680 aa13.78□□□□□ -0.2
TMTC3-204ENST00000551088 SLC10A3P09131 477 aa13.77□□□□□ -0.21
TMTC3-204ENST00000551088 SETD5Q9C0A6 1442 aa13.76□□□□□ -0.21
TMTC3-204ENST00000551088 GFRA3O60609 400 aa13.76□□□□□ -0.21
TMTC3-204ENST00000551088 ZC3H15Q8WU90 426 aaKnown RBP13.76□□□□□ -0.21
TMTC3-204ENST00000551088 DDX17Q92841 729 aaKnown RBP13.76□□□□□ -0.21
TMTC3-204ENST00000551088 LRRC59Q96AG4 307 aaKnown RBP13.76□□□□□ -0.21
TMTC3-204ENST00000551088 TMUB1Q9BVT8 246 aa13.76□□□□□ -0.21
TMTC3-204ENST00000551088 TLL1O43897 1013 aa13.75□□□□□ -0.21
TMTC3-204ENST00000551088 FECHP22830 423 aa13.75□□□□□ -0.21
TMTC3-204ENST00000551088 RXRBP28702 533 aa13.75□□□□□ -0.21
TMTC3-204ENST00000551088 HFM1A2PYH4 1435 aa13.74□□□□□ -0.21
TMTC3-204ENST00000551088 AFF2P51816 1311 aa13.74□□□□□ -0.21
TMTC3-204ENST00000551088 GPR37O15354 613 aa13.74□□□□□ -0.21
TMTC3-204ENST00000551088 IFT172Q9UG01 1749 aa13.73□□□□□ -0.21
TMTC3-204ENST00000551088 C8orf37Q96NL8 207 aa13.73□□□□□ -0.21
TMTC3-204ENST00000551088 C1orf167Q5SNV9 1468 aa13.73□□□□□ -0.21
TMTC3-204ENST00000551088 PTCH1Q13635 1447 aa13.73□□□□□ -0.21
TMTC3-204ENST00000551088 LAMC1P11047 1609 aa13.72□□□□□ -0.21
TMTC3-204ENST00000551088 RPGRIP1LQ68CZ1 1315 aa13.72□□□□□ -0.21
TMTC3-204ENST00000551088 MARF1Q9Y4F3 1742 aaKnown RBP13.72□□□□□ -0.21
TMTC3-204ENST00000551088 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.21
TMTC3-204ENST00000551088 RGPD8O14715 1765 aaPredicted RBP13.71□□□□□ -0.22
TMTC3-204ENST00000551088 PNPLA6Q8IY17 1366 aa13.71□□□□□ -0.22
TMTC3-204ENST00000551088 BRPF1P55201 1214 aaPredicted RBP13.7□□□□□ -0.22
TMTC3-204ENST00000551088 GPIHBP1Q8IV16 184 aa13.7□□□□□ -0.22
TMTC3-204ENST00000551088 RNF223E7ERA6 249 aa13.69□□□□□ -0.22
TMTC3-204ENST00000551088 NR1I2O75469 434 aa13.69□□□□□ -0.22
TMTC3-204ENST00000551088 ADAMTS2O95450 1211 aa13.69□□□□□ -0.22
TMTC3-204ENST00000551088 ORAI2Q96SN7 254 aa13.69□□□□□ -0.22
TMTC3-204ENST00000551088 NRG2O14511 850 aaPredicted RBP13.68□□□□□ -0.22
TMTC3-204ENST00000551088 RGL3Q3MIN7 710 aa13.68□□□□□ -0.22
TMTC3-204ENST00000551088 NGLY1Q96IV0 654 aa13.68□□□□□ -0.22
TMTC3-204ENST00000551088 QTRT2Q9H974 415 aaKnown RBP13.68□□□□□ -0.22
TMTC3-204ENST00000551088 CDK12Q9NYV4 1490 aaPredicted RBP13.67□□□□□ -0.22
TMTC3-204ENST00000551088 KNDC1Q76NI1 1749 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms