RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 TBC1D2BQ9UPU7 963 aa11.37□□□□□ -0.59
GNPTAB-208ENST00000550718 TRAK2O60296 914 aa11.36□□□□□ -0.59
GNPTAB-208ENST00000550718 ITGA6P23229 1130 aa11.36□□□□□ -0.59
GNPTAB-208ENST00000550718 LYSMD3Q7Z3D4 306 aa11.36□□□□□ -0.59
GNPTAB-208ENST00000550718 SENP3-EIF4A1A0A087X0R7 540 aa11.35□□□□□ -0.59
GNPTAB-208ENST00000550718 EIF4G2P78344 907 aaKnown RBP eCLIP11.35□□□□□ -0.59
GNPTAB-208ENST00000550718 PCDHB11Q9Y5F2 797 aa11.35□□□□□ -0.59
GNPTAB-208ENST00000550718 IRF5Q13568 498 aa11.34□□□□□ -0.59
GNPTAB-208ENST00000550718 A0A1W2PRU2 124 aa11.33□□□□□ -0.6
GNPTAB-208ENST00000550718 PRKCSHP14314 528 aaPredicted RBP11.33□□□□□ -0.6
GNPTAB-208ENST00000550718 CLN3Q13286 438 aa11.33□□□□□ -0.6
GNPTAB-208ENST00000550718 SCTRP47872 440 aa11.32□□□□□ -0.6
GNPTAB-208ENST00000550718 OSBPL3Q9H4L5 887 aa11.32□□□□□ -0.6
GNPTAB-208ENST00000550718 GPR161Q8N6U8 529 aaKnown RBP11.31□□□□□ -0.6
GNPTAB-208ENST00000550718 ESF1Q9H501 851 aaKnown RBP11.31□□□□□ -0.6
GNPTAB-208ENST00000550718 GNRH1P01148 92 aa11.3□□□□□ -0.6
GNPTAB-208ENST00000550718 WASHC4Q2M389 1173 aa11.3□□□□□ -0.6
GNPTAB-208ENST00000550718 WDR44Q5JSH3 913 aa11.3□□□□□ -0.6
GNPTAB-208ENST00000550718 GMCL1Q96IK5 515 aa11.3□□□□□ -0.6
GNPTAB-208ENST00000550718 SV2AQ7L0J3 742 aa11.29□□□□□ -0.6
GNPTAB-208ENST00000550718 PHTF2Q8N3S3 785 aa11.29□□□□□ -0.6
GNPTAB-208ENST00000550718 NLRP3Q96P20 1036 aa11.29□□□□□ -0.6
GNPTAB-208ENST00000550718 MEN1O00255 615 aa11.28□□□□□ -0.6
GNPTAB-208ENST00000550718 MYCP01106 439 aaPredicted RBP11.28□□□□□ -0.6
GNPTAB-208ENST00000550718 MCM6Q14566 821 aa11.28□□□□□ -0.6
GNPTAB-208ENST00000550718 GRIP2Q9C0E4 1043 aa11.28□□□□□ -0.6
GNPTAB-208ENST00000550718 CHIC2Q9UKJ5 165 aa11.28□□□□□ -0.6
GNPTAB-208ENST00000550718 KRT76Q01546 638 aa11.27□□□□□ -0.61
GNPTAB-208ENST00000550718 PRICKLE2Q7Z3G6 844 aa11.27□□□□□ -0.61
GNPTAB-208ENST00000550718 VWA5B2Q8N398 1253 aa11.27□□□□□ -0.61
GNPTAB-208ENST00000550718 CCDC85AQ96PX6 553 aaPredicted RBP11.27□□□□□ -0.61
GNPTAB-208ENST00000550718 COL25A1Q9BXS0 654 aaPredicted RBP11.27□□□□□ -0.61
GNPTAB-208ENST00000550718 GDPD2Q9HCC8 539 aa11.27□□□□□ -0.61
GNPTAB-208ENST00000550718 SPATA31C2B4DYI2 1134 aa11.26□□□□□ -0.61
GNPTAB-208ENST00000550718 SOX11P35716 441 aa11.26□□□□□ -0.61
GNPTAB-208ENST00000550718 USP4Q13107 963 aa11.25□□□□□ -0.61
GNPTAB-208ENST00000550718 SLFNL1Q499Z3 407 aa11.25□□□□□ -0.61
GNPTAB-208ENST00000550718 SLC27A3Q5K4L6 730 aa11.25□□□□□ -0.61
GNPTAB-208ENST00000550718 ESYT1Q9BSJ8 1104 aa11.25□□□□□ -0.61
GNPTAB-208ENST00000550718 DYRK1BQ9Y463 629 aa11.25□□□□□ -0.61
GNPTAB-208ENST00000550718 SIRT1Q96EB6 747 aa11.24□□□□□ -0.61
GNPTAB-208ENST00000550718 CNTNAP3BQ96NU0 1288 aa11.24□□□□□ -0.61
GNPTAB-208ENST00000550718 CNTNAP3Q9BZ76 1288 aa11.24□□□□□ -0.61
GNPTAB-208ENST00000550718 ARHGEF10LQ9HCE6 1279 aa11.24□□□□□ -0.61
GNPTAB-208ENST00000550718 CDC14CA4D256 554 aa11.23□□□□□ -0.61
GNPTAB-208ENST00000550718 CDCA7Q9BWT1 371 aaPredicted RBP11.23□□□□□ -0.61
GNPTAB-208ENST00000550718 SLURP2P0DP57 97 aa11.22□□□□□ -0.61
GNPTAB-208ENST00000550718 ABL2P42684 1182 aa11.22□□□□□ -0.61
GNPTAB-208ENST00000550718 VAC14Q08AM6 782 aa11.22□□□□□ -0.61
GNPTAB-208ENST00000550718 RNF135Q8IUD6 432 aa11.22□□□□□ -0.61
GNPTAB-208ENST00000550718 TRIM22Q8IYM9 498 aa11.22□□□□□ -0.61
GNPTAB-208ENST00000550718 DOLKQ9UPQ8 538 aa11.22□□□□□ -0.61
GNPTAB-208ENST00000550718 HRH3Q9Y5N1 445 aa11.22□□□□□ -0.61
GNPTAB-208ENST00000550718 RHOQP17081 205 aa11.21□□□□□ -0.61
GNPTAB-208ENST00000550718 MAP7D1Q3KQU3 841 aa11.21□□□□□ -0.61
GNPTAB-208ENST00000550718 ESCO1Q5FWF5 840 aa11.21□□□□□ -0.61
GNPTAB-208ENST00000550718 RNFT1Q5M7Z0 435 aa11.21□□□□□ -0.61
GNPTAB-208ENST00000550718 NBPF10Q6P3W6 841 aaKnown RBP11.21□□□□□ -0.61
GNPTAB-208ENST00000550718 NBPF15Q8N660 670 aa11.21□□□□□ -0.61
GNPTAB-208ENST00000550718 CNKSR1Q969H4 720 aa11.21□□□□□ -0.61
GNPTAB-208ENST00000550718 XAGE2Q96GT9 111 aa11.21□□□□□ -0.61
GNPTAB-208ENST00000550718 H7C1W4 665 aa11.19□□□□□ -0.62
GNPTAB-208ENST00000550718 IL2RAP01589 272 aa11.19□□□□□ -0.62
GNPTAB-208ENST00000550718 POU4F2Q12837 409 aa11.19□□□□□ -0.62
GNPTAB-208ENST00000550718 TAS1R3Q7RTX0 852 aa11.19□□□□□ -0.62
GNPTAB-208ENST00000550718 CUEDC1Q9NWM3 386 aaPredicted RBP11.19□□□□□ -0.62
GNPTAB-208ENST00000550718 CENPCQ03188 943 aa11.18□□□□□ -0.62
GNPTAB-208ENST00000550718 SEMA3FQ13275 785 aa11.18□□□□□ -0.62
GNPTAB-208ENST00000550718 ZNF837Q96EG3 531 aaPredicted RBP11.18□□□□□ -0.62
GNPTAB-208ENST00000550718 COG6Q9Y2V7 657 aa11.18□□□□□ -0.62
GNPTAB-208ENST00000550718 WASLO00401 505 aaPredicted RBP11.17□□□□□ -0.62
GNPTAB-208ENST00000550718 TSGA10IPQ3SY00 556 aa11.17□□□□□ -0.62
GNPTAB-208ENST00000550718 SRSF11Q05519 484 aaKnown RBP11.16□□□□□ -0.62
GNPTAB-208ENST00000550718 FOXR1Q6PIV2 292 aa11.16□□□□□ -0.62
GNPTAB-208ENST00000550718 FHDC1Q9C0D6 1143 aaPredicted RBP11.16□□□□□ -0.62
GNPTAB-208ENST00000550718 RAB6BQ9NRW1 208 aa11.16□□□□□ -0.62
GNPTAB-208ENST00000550718 FLIIQ13045 1269 aa11.15□□□□□ -0.62
GNPTAB-208ENST00000550718 DBN1Q16643 649 aa11.15□□□□□ -0.62
GNPTAB-208ENST00000550718 ZSCAN10Q96SZ4 725 aaPredicted RBP11.15□□□□□ -0.62
GNPTAB-208ENST00000550718 TIMMDC1Q9NPL8 285 aa11.15□□□□□ -0.62
GNPTAB-208ENST00000550718 F11P03951 625 aa11.14□□□□□ -0.63
GNPTAB-208ENST00000550718 WWC1Q8IX03 1113 aa11.14□□□□□ -0.63
GNPTAB-208ENST00000550718 GAS6Q14393 721 aa11.13□□□□□ -0.63
GNPTAB-208ENST00000550718 ZNF385CQ66K41 422 aaPredicted RBP11.13□□□□□ -0.63
GNPTAB-208ENST00000550718 RIPOR1Q6ZS17 1223 aa11.13□□□□□ -0.63
GNPTAB-208ENST00000550718 PLPP7Q8NBV4 271 aa11.13□□□□□ -0.63
GNPTAB-208ENST00000550718 A0A1B0GTH6 734 aa11.12□□□□□ -0.63
GNPTAB-208ENST00000550718 GTF2E1P29083 439 aaPredicted RBP11.12□□□□□ -0.63
GNPTAB-208ENST00000550718 ETNK1Q9HBU6 452 aa11.12□□□□□ -0.63
GNPTAB-208ENST00000550718 LZTS3O60299 673 aaPredicted RBP11.11□□□□□ -0.63
GNPTAB-208ENST00000550718 OXLD1Q5BKU9 147 aa11.11□□□□□ -0.63
GNPTAB-208ENST00000550718 GNASQ5JWF2 1037 aa11.11□□□□□ -0.63
GNPTAB-208ENST00000550718 PPARGC1BQ86YN6 1023 aaKnown RBP11.11□□□□□ -0.63
GNPTAB-208ENST00000550718 NFATC2IPQ8NCF5 419 aa11.11□□□□□ -0.63
GNPTAB-208ENST00000550718 GAS2L1Q99501 681 aaPredicted RBP11.11□□□□□ -0.63
GNPTAB-208ENST00000550718 ALG2Q9H553 416 aa11.11□□□□□ -0.63
GNPTAB-208ENST00000550718 MBIPQ9NS73 344 aa11.11□□□□□ -0.63
GNPTAB-208ENST00000550718 ADAMTS2O95450 1211 aa11.1□□□□□ -0.63
GNPTAB-208ENST00000550718 KCNMA1Q12791 1236 aa11.1□□□□□ -0.63
GNPTAB-208ENST00000550718 LBRQ14739 615 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms