RNA–Protein interactions for RNA: ENST00000549671.5

SYT1-208, Transcript of synaptotagmin 1, humanhuman

TSL 1 (best)

Gene SYT1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-208ENST00000549671 CCDC155Q8N6L0 562 aa9.68□□□□□ -0.86
SYT1-208ENST00000549671 INSM2Q96T92 566 aaPredicted RBP9.68□□□□□ -0.86
SYT1-208ENST00000549671 NDUFB9Q9Y6M9 179 aa9.68□□□□□ -0.86
SYT1-208ENST00000549671 HMGXB3Q12766 1538 aa9.67□□□□□ -0.86
SYT1-208ENST00000549671 ZNF330Q9Y3S2 320 aaPredicted RBP9.67□□□□□ -0.86
SYT1-208ENST00000549671 GIGYF1O75420 1035 aaPredicted RBP9.66□□□□□ -0.86
SYT1-208ENST00000549671 PCDHB9Q9Y5E1 797 aa9.66□□□□□ -0.86
SYT1-208ENST00000549671 ATAD2BQ9ULI0 1458 aa9.66□□□□□ -0.86
SYT1-208ENST00000549671 FIGNL2A6NMB9 653 aa9.65□□□□□ -0.86
SYT1-208ENST00000549671 RAB15P59190 212 aa9.65□□□□□ -0.86
SYT1-208ENST00000549671 ERVK-9P63128 1117 aa9.65□□□□□ -0.86
SYT1-208ENST00000549671 FOXD4L5Q5VV16 416 aaPredicted RBP9.65□□□□□ -0.86
SYT1-208ENST00000549671 POLMQ9NP87 494 aaPredicted RBP9.65□□□□□ -0.86
SYT1-208ENST00000549671 GPC1P35052 558 aa9.64□□□□□ -0.87
SYT1-208ENST00000549671 SENP3-EIF4A1A0A087X0R7 540 aa9.63□□□□□ -0.87
SYT1-208ENST00000549671 ITGA6P23229 1130 aa9.63□□□□□ -0.87
SYT1-208ENST00000549671 RNF144AP50876 292 aaPredicted RBP9.63□□□□□ -0.87
SYT1-208ENST00000549671 ZNF395Q9H8N7 513 aaPredicted RBP9.63□□□□□ -0.87
SYT1-208ENST00000549671 CYLDQ9NQC7 956 aa9.63□□□□□ -0.87
SYT1-208ENST00000549671 CC2D2BQ6DHV5 1058 aa9.62□□□□□ -0.87
SYT1-208ENST00000549671 ATP5J2-PTCD1G3V325 749 aa9.61□□□□□ -0.87
SYT1-208ENST00000549671 KRT76Q01546 638 aa9.61□□□□□ -0.87
SYT1-208ENST00000549671 GPR161Q8N6U8 529 aaKnown RBP9.61□□□□□ -0.87
SYT1-208ENST00000549671 SNRKQ9NRH2 765 aa9.61□□□□□ -0.87
SYT1-208ENST00000549671 SMARCA2P51531 1590 aa9.61□□□□□ -0.87
SYT1-208ENST00000549671 LAMC3Q9Y6N6 1575 aa9.61□□□□□ -0.87
SYT1-208ENST00000549671 LYSMD3Q7Z3D4 306 aa9.6□□□□□ -0.87
SYT1-208ENST00000549671 TRAK2O60296 914 aa9.58□□□□□ -0.88
SYT1-208ENST00000549671 CYP2U1Q7Z449 544 aa9.58□□□□□ -0.88
SYT1-208ENST00000549671 SV2AQ7L0J3 742 aa9.57□□□□□ -0.88
SYT1-208ENST00000549671 GMCL1Q96IK5 515 aa9.57□□□□□ -0.88
SYT1-208ENST00000549671 COL25A1Q9BXS0 654 aaPredicted RBP9.57□□□□□ -0.88
SYT1-208ENST00000549671 KIF21AQ7Z4S6 1674 aa9.56□□□□□ -0.88
SYT1-208ENST00000549671 SLURP2P0DP57 97 aa9.56□□□□□ -0.88
SYT1-208ENST00000549671 CLN3Q13286 438 aa9.56□□□□□ -0.88
SYT1-208ENST00000549671 PRM3Q9NNZ6 103 aa9.56□□□□□ -0.88
SYT1-208ENST00000549671 A0A1W2PRU2 124 aa9.55□□□□□ -0.88
SYT1-208ENST00000549671 WDR44Q5JSH3 913 aa9.55□□□□□ -0.88
SYT1-208ENST00000549671 BAZ1AQ9NRL2 1556 aaPredicted RBP9.54□□□□□ -0.88
SYT1-208ENST00000549671 SCTRP47872 440 aa9.54□□□□□ -0.88
SYT1-208ENST00000549671 RNFT1Q5M7Z0 435 aa9.54□□□□□ -0.88
SYT1-208ENST00000549671 CNTNAP3BQ96NU0 1288 aa9.54□□□□□ -0.88
SYT1-208ENST00000549671 CNTNAP3Q9BZ76 1288 aa9.54□□□□□ -0.88
SYT1-208ENST00000549671 OSBPL3Q9H4L5 887 aa9.54□□□□□ -0.88
SYT1-208ENST00000549671 CEP126Q9P2H0 1117 aa9.54□□□□□ -0.88
SYT1-208ENST00000549671 PCDHB11Q9Y5F2 797 aa9.54□□□□□ -0.88
SYT1-208ENST00000549671 SMARCA4P51532 1647 aa9.53□□□□□ -0.88
SYT1-208ENST00000549671 SPATA31C2B4DYI2 1134 aa9.53□□□□□ -0.88
SYT1-208ENST00000549671 VWA5B2Q8N398 1253 aa9.53□□□□□ -0.88
SYT1-208ENST00000549671 GRIP2Q9C0E4 1043 aa9.53□□□□□ -0.88
SYT1-208ENST00000549671 PDS5BQ9NTI5 1447 aa9.53□□□□□ -0.88
SYT1-208ENST00000549671 WDR62O43379 1518 aa9.52□□□□□ -0.88
SYT1-208ENST00000549671 TBC1D2BQ9UPU7 963 aa9.52□□□□□ -0.89
SYT1-208ENST00000549671 DYRK1BQ9Y463 629 aa9.52□□□□□ -0.89
SYT1-208ENST00000549671 PEG3Q9GZU2 1588 aa9.51□□□□□ -0.89
SYT1-208ENST00000549671 CDC14CA4D256 554 aa9.51□□□□□ -0.89
SYT1-208ENST00000549671 GNRH1P01148 92 aa9.51□□□□□ -0.89
SYT1-208ENST00000549671 BAZ1BQ9UIG0 1483 aaKnown RBP9.51□□□□□ -0.89
SYT1-208ENST00000549671 MEN1O00255 615 aa9.5□□□□□ -0.89
SYT1-208ENST00000549671 EIF4G2P78344 907 aaKnown RBP eCLIP9.5□□□□□ -0.89
SYT1-208ENST00000549671 IRF5Q13568 498 aa9.5□□□□□ -0.89
SYT1-208ENST00000549671 PRICKLE2Q7Z3G6 844 aa9.5□□□□□ -0.89
SYT1-208ENST00000549671 TRIM22Q8IYM9 498 aa9.5□□□□□ -0.89
SYT1-208ENST00000549671 NLRP3Q96P20 1036 aa9.5□□□□□ -0.89
SYT1-208ENST00000549671 CHIC2Q9UKJ5 165 aa9.5□□□□□ -0.89
SYT1-208ENST00000549671 MRC2Q9UBG0 1479 aa9.49□□□□□ -0.89
SYT1-208ENST00000549671 KCNMA1Q12791 1236 aa9.49□□□□□ -0.89
SYT1-208ENST00000549671 ZNF385CQ66K41 422 aaPredicted RBP9.49□□□□□ -0.89
SYT1-208ENST00000549671 PHTF2Q8N3S3 785 aa9.49□□□□□ -0.89
SYT1-208ENST00000549671 CUEDC1Q9NWM3 386 aaPredicted RBP9.49□□□□□ -0.89
SYT1-208ENST00000549671 SRSF11Q05519 484 aaKnown RBP9.48□□□□□ -0.89
SYT1-208ENST00000549671 ZNF837Q96EG3 531 aaPredicted RBP9.48□□□□□ -0.89
SYT1-208ENST00000549671 CCDC85AQ96PX6 553 aaPredicted RBP9.48□□□□□ -0.89
SYT1-208ENST00000549671 ESYT1Q9BSJ8 1104 aa9.48□□□□□ -0.89
SYT1-208ENST00000549671 HRH3Q9Y5N1 445 aa9.48□□□□□ -0.89
SYT1-208ENST00000549671 H7C1W4 665 aa9.47□□□□□ -0.89
SYT1-208ENST00000549671 MYCP01106 439 aaPredicted RBP9.47□□□□□ -0.89
SYT1-208ENST00000549671 GAS6Q14393 721 aa9.47□□□□□ -0.89
SYT1-208ENST00000549671 SLC27A3Q5K4L6 730 aa9.47□□□□□ -0.89
SYT1-208ENST00000549671 NBPF10Q6P3W6 841 aaKnown RBP9.47□□□□□ -0.89
SYT1-208ENST00000549671 NBPF15Q8N660 670 aa9.47□□□□□ -0.89
SYT1-208ENST00000549671 ESF1Q9H501 851 aaKnown RBP9.47□□□□□ -0.89
SYT1-208ENST00000549671 ARHGEF10LQ9HCE6 1279 aa9.47□□□□□ -0.89
SYT1-208ENST00000549671 RNF225M0QZC1 329 aaPredicted RBP9.46□□□□□ -0.9
SYT1-208ENST00000549671 RHOQP17081 205 aa9.46□□□□□ -0.9
SYT1-208ENST00000549671 ARHGEF15O94989 841 aa9.45□□□□□ -0.9
SYT1-208ENST00000549671 GSK3AP49840 483 aa9.45□□□□□ -0.9
SYT1-208ENST00000549671 WASLO00401 505 aaPredicted RBP9.44□□□□□ -0.9
SYT1-208ENST00000549671 IL2RAP01589 272 aa9.44□□□□□ -0.9
SYT1-208ENST00000549671 POU4F2Q12837 409 aa9.44□□□□□ -0.9
SYT1-208ENST00000549671 WASHC4Q2M389 1173 aa9.44□□□□□ -0.9
SYT1-208ENST00000549671 TAS1R3Q7RTX0 852 aa9.44□□□□□ -0.9
SYT1-208ENST00000549671 CNKSR1Q969H4 720 aa9.44□□□□□ -0.9
SYT1-208ENST00000549671 XAGE2Q96GT9 111 aa9.44□□□□□ -0.9
SYT1-208ENST00000549671 CDCA7Q9BWT1 371 aaPredicted RBP9.44□□□□□ -0.9
SYT1-208ENST00000549671 ADAMTS8Q9UP79 889 aa9.44□□□□□ -0.9
SYT1-208ENST00000549671 RIMBP3CA6NJZ7 1639 aa9.43□□□□□ -0.9
SYT1-208ENST00000549671 RIMBP3BA6NNM3 1639 aa9.43□□□□□ -0.9
SYT1-208ENST00000549671 RIMBP3Q9UFD9 1639 aa9.43□□□□□ -0.9
SYT1-208ENST00000549671 ADAMTS2O95450 1211 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms