RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 M0R2N6 131 aa14.6□□□□□ -0.07
PRIM1-204ENST00000549549 WEE1P30291 646 aa14.59□□□□□ -0.07
PRIM1-204ENST00000549549 NBPF20Q3BBV1 942 aa14.59□□□□□ -0.07
PRIM1-204ENST00000549549 TRMT44Q8IYL2 757 aaKnown RBP14.59□□□□□ -0.07
PRIM1-204ENST00000549549 SLC10A4Q96EP9 437 aa14.59□□□□□ -0.07
PRIM1-204ENST00000549549 MTRQ99707 1265 aa14.59□□□□□ -0.07
PRIM1-204ENST00000549549 AGERQ15109 404 aa14.58□□□□□ -0.08
PRIM1-204ENST00000549549 ECM1Q16610 540 aa14.58□□□□□ -0.08
PRIM1-204ENST00000549549 CDV3Q9UKY7 258 aaKnown RBP14.58□□□□□ -0.08
PRIM1-204ENST00000549549 ABL1P00519 1130 aa14.57□□□□□ -0.08
PRIM1-204ENST00000549549 PSME1Q06323 249 aa14.57□□□□□ -0.08
PRIM1-204ENST00000549549 FAM163AQ96GL9 167 aaPredicted RBP14.57□□□□□ -0.08
PRIM1-204ENST00000549549 PCDHB11Q9Y5F2 797 aa14.57□□□□□ -0.08
PRIM1-204ENST00000549549 LINC01559Q495D7 138 aa14.56□□□□□ -0.08
PRIM1-204ENST00000549549 H3BRB1 525 aa14.55□□□□□ -0.08
PRIM1-204ENST00000549549 C21orf2O43822 256 aa14.55□□□□□ -0.08
PRIM1-204ENST00000549549 ZNF211Q13398 564 aaPredicted RBP14.55□□□□□ -0.08
PRIM1-204ENST00000549549 TJAP1Q5JTD0 557 aa14.55□□□□□ -0.08
PRIM1-204ENST00000549549 GIPC2Q8TF65 315 aa14.55□□□□□ -0.08
PRIM1-204ENST00000549549 GTF3C2Q8WUA4 911 aaPredicted RBP14.55□□□□□ -0.08
PRIM1-204ENST00000549549 HINFPQ9BQA5 517 aa14.55□□□□□ -0.08
PRIM1-204ENST00000549549 TUT1Q9H6E5 874 aaKnown RBP14.55□□□□□ -0.08
PRIM1-204ENST00000549549 IL21Q9HBE4 155 aa14.54□□□□□ -0.08
PRIM1-204ENST00000549549 GLYCTKQ8IVS8 523 aa14.53□□□□□ -0.08
PRIM1-204ENST00000549549 SEPT3Q9UH03 358 aa14.53□□□□□ -0.08
PRIM1-204ENST00000549549 FKBP4Q02790 459 aaKnown RBP eCLIP14.52□□□□□ -0.09
PRIM1-204ENST00000549549 SF3B2Q13435 895 aaKnown RBP14.52□□□□□ -0.09
PRIM1-204ENST00000549549 ZNF516Q92618 1163 aa14.52□□□□□ -0.09
PRIM1-204ENST00000549549 COL26A1Q96A83 441 aa14.52□□□□□ -0.09
PRIM1-204ENST00000549549 ANO2Q9NQ90 1003 aa14.52□□□□□ -0.09
PRIM1-204ENST00000549549 DNMT3AQ9Y6K1 912 aaPredicted RBP14.52□□□□□ -0.09
PRIM1-204ENST00000549549 SHROOM4Q9ULL8 1493 aa14.51□□□□□ -0.09
PRIM1-204ENST00000549549 PTCD1O75127 700 aaKnown RBP14.51□□□□□ -0.09
PRIM1-204ENST00000549549 VAMP1P23763 118 aa14.51□□□□□ -0.09
PRIM1-204ENST00000549549 ZNF326Q5BKZ1 582 aaKnown RBP14.51□□□□□ -0.09
PRIM1-204ENST00000549549 TSEN2Q8NCE0 465 aaKnown RBP14.51□□□□□ -0.09
PRIM1-204ENST00000549549 SH3BP2P78314 561 aa14.5□□□□□ -0.09
PRIM1-204ENST00000549549 FBXO33Q7Z6M2 555 aa14.5□□□□□ -0.09
PRIM1-204ENST00000549549 ASB16Q96NS5 453 aa14.5□□□□□ -0.09
PRIM1-204ENST00000549549 ARHGAP4P98171 946 aa14.49□□□□□ -0.09
PRIM1-204ENST00000549549 FKBP5Q13451 457 aaPredicted RBP14.49□□□□□ -0.09
PRIM1-204ENST00000549549 LCE2DQ5TA82 110 aaPredicted RBP14.49□□□□□ -0.09
PRIM1-204ENST00000549549 DCTN4Q9UJW0 460 aa14.49□□□□□ -0.09
PRIM1-204ENST00000549549 FCF1Q9Y324 198 aaKnown RBP14.49□□□□□ -0.09
PRIM1-204ENST00000549549 LGR5O75473 907 aa14.48□□□□□ -0.09
PRIM1-204ENST00000549549 COL19A1Q14993 1142 aa14.48□□□□□ -0.09
PRIM1-204ENST00000549549 MYCP01106 439 aaPredicted RBP14.47□□□□□ -0.09
PRIM1-204ENST00000549549 CAPN12Q6ZSI9 719 aa14.47□□□□□ -0.09
PRIM1-204ENST00000549549 KCTD15Q96SI1 283 aaPredicted RBP14.47□□□□□ -0.09
PRIM1-204ENST00000549549 S1PR4O95977 384 aa14.46□□□□□ -0.09
PRIM1-204ENST00000549549 MAPK1P28482 360 aa14.46□□□□□ -0.09
PRIM1-204ENST00000549549 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.46□□□□□ -0.09
PRIM1-204ENST00000549549 KCTD12Q96CX2 325 aaKnown RBP14.46□□□□□ -0.09
PRIM1-204ENST00000549549 PURBQ96QR8 312 aaKnown RBP14.46□□□□□ -0.09
PRIM1-204ENST00000549549 IGFBP4P22692 258 aa14.45□□□□□ -0.1
PRIM1-204ENST00000549549 MKNK1Q9BUB5 465 aa14.45□□□□□ -0.1
PRIM1-204ENST00000549549 ZNF358Q9NW07 568 aa14.45□□□□□ -0.1
PRIM1-204ENST00000549549 NPR3P17342 541 aa14.44□□□□□ -0.1
PRIM1-204ENST00000549549 ZSCAN29Q8IWY8 852 aaPredicted RBP14.44□□□□□ -0.1
PRIM1-204ENST00000549549 MAP4K5Q9Y4K4 846 aa14.44□□□□□ -0.1
PRIM1-204ENST00000549549 POTEMA6NI47 508 aa14.43□□□□□ -0.1
PRIM1-204ENST00000549549 TMEM229AB2RXF0 380 aa14.43□□□□□ -0.1
PRIM1-204ENST00000549549 FOXO3O43524 673 aa14.42□□□□□ -0.1
PRIM1-204ENST00000549549 TCF3P15923 654 aa14.42□□□□□ -0.1
PRIM1-204ENST00000549549 SCTRP47872 440 aa14.42□□□□□ -0.1
PRIM1-204ENST00000549549 NKX2-3Q8TAU0 364 aa14.42□□□□□ -0.1
PRIM1-204ENST00000549549 HELQQ8TDG4 1101 aa14.42□□□□□ -0.1
PRIM1-204ENST00000549549 WASLO00401 505 aaPredicted RBP14.41□□□□□ -0.1
PRIM1-204ENST00000549549 ERVK-9P63128 1117 aa14.41□□□□□ -0.1
PRIM1-204ENST00000549549 MTMR3Q13615 1198 aa14.41□□□□□ -0.1
PRIM1-204ENST00000549549 INTS6LQ5JSJ4 861 aaKnown RBP14.41□□□□□ -0.1
PRIM1-204ENST00000549549 ERVH48-1M5A8F1 160 aa14.4□□□□□ -0.1
PRIM1-204ENST00000549549 RGL4Q8IZJ4 473 aa14.4□□□□□ -0.1
PRIM1-204ENST00000549549 VARSP26640 1264 aaKnown RBP14.39□□□□□ -0.11
PRIM1-204ENST00000549549 TAGLNQ01995 201 aaKnown RBP14.39□□□□□ -0.11
PRIM1-204ENST00000549549 SCNN1DP51172 638 aa14.38□□□□□ -0.11
PRIM1-204ENST00000549549 GAS2L2Q8NHY3 880 aa14.38□□□□□ -0.11
PRIM1-204ENST00000549549 RAB15P59190 212 aa14.37□□□□□ -0.11
PRIM1-204ENST00000549549 KRTAP3-3Q9BYR6 98 aa14.37□□□□□ -0.11
PRIM1-204ENST00000549549 KRTAP3-2Q9BYR7 98 aa14.37□□□□□ -0.11
PRIM1-204ENST00000549549 USP35Q9P2H5 1018 aa14.37□□□□□ -0.11
PRIM1-204ENST00000549549 BACH1O14867 736 aa14.36□□□□□ -0.11
PRIM1-204ENST00000549549 FAM13AO94988 1023 aa14.36□□□□□ -0.11
PRIM1-204ENST00000549549 NAA30Q147X3 362 aaPredicted RBP14.36□□□□□ -0.11
PRIM1-204ENST00000549549 CC2D2BQ6DHV5 1058 aa14.36□□□□□ -0.11
PRIM1-204ENST00000549549 OSBPL3Q9H4L5 887 aa14.36□□□□□ -0.11
PRIM1-204ENST00000549549 EPHA4P54764 986 aa14.35□□□□□ -0.11
PRIM1-204ENST00000549549 VASH1Q7L8A9 365 aaPredicted RBP14.35□□□□□ -0.11
PRIM1-204ENST00000549549 SCG3Q8WXD2 468 aaKnown RBP14.34□□□□□ -0.11
PRIM1-204ENST00000549549 RBCK1Q9BYM8 510 aa14.34□□□□□ -0.11
PRIM1-204ENST00000549549 ATAD2Q6PL18 1390 aa14.34□□□□□ -0.11
PRIM1-204ENST00000549549 GDF10P55107 478 aa14.33□□□□□ -0.12
PRIM1-204ENST00000549549 WNT7BP56706 349 aa14.33□□□□□ -0.12
PRIM1-204ENST00000549549 TNS4Q8IZW8 715 aa14.33□□□□□ -0.12
PRIM1-204ENST00000549549 TRIM52Q96A61 297 aa14.33□□□□□ -0.12
PRIM1-204ENST00000549549 SLC4A9Q96Q91 983 aa14.33□□□□□ -0.12
PRIM1-204ENST00000549549 TRIM32Q13049 653 aa14.32□□□□□ -0.12
PRIM1-204ENST00000549549 EAPPQ56P03 285 aaPredicted RBP14.32□□□□□ -0.12
PRIM1-204ENST00000549549 ESF1Q9H501 851 aaKnown RBP14.32□□□□□ -0.12
PRIM1-204ENST00000549549 ZBTB24O43167 697 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms