RNA–Protein interactions for RNA: ENST00000549349.5

CALCOCO1-213, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-213ENST00000549349 RGS12O14924 1447 aa12.78□□□□□ -0.36
CALCOCO1-213ENST00000549349 ITGB4P16144 1822 aa12.77□□□□□ -0.37
CALCOCO1-213ENST00000549349 ONECUT3O60422 494 aaPredicted RBP12.77□□□□□ -0.37
CALCOCO1-213ENST00000549349 TATP17735 454 aaPredicted RBP12.77□□□□□ -0.37
CALCOCO1-213ENST00000549349 FAM182BQ5T319 152 aa12.77□□□□□ -0.37
CALCOCO1-213ENST00000549349 RAPGEF4Q8WZA2 1011 aa12.77□□□□□ -0.37
CALCOCO1-213ENST00000549349 RSPH6AQ9H0K4 717 aa12.76□□□□□ -0.37
CALCOCO1-213ENST00000549349 ADAMTS8Q9UP79 889 aa12.76□□□□□ -0.37
CALCOCO1-213ENST00000549349 KDRP35968 1356 aa12.76□□□□□ -0.37
CALCOCO1-213ENST00000549349 SENP3-EIF4A1A0A087X0R7 540 aa12.75□□□□□ -0.37
CALCOCO1-213ENST00000549349 OVOS2A0A0G2JMS6 1433 aa12.75□□□□□ -0.37
CALCOCO1-213ENST00000549349 PRKAR2BP31323 418 aa12.75□□□□□ -0.37
CALCOCO1-213ENST00000549349 WDR43Q15061 677 aaKnown RBP eCLIP12.75□□□□□ -0.37
CALCOCO1-213ENST00000549349 CCDC146Q8IYE0 955 aa12.75□□□□□ -0.37
CALCOCO1-213ENST00000549349 PNISRQ8TF01 805 aaKnown RBP12.75□□□□□ -0.37
CALCOCO1-213ENST00000549349 SCN11AQ9UI33 1791 aa12.74□□□□□ -0.37
CALCOCO1-213ENST00000549349 EXOC5O00471 708 aa12.74□□□□□ -0.37
CALCOCO1-213ENST00000549349 DDB1Q16531 1140 aa12.74□□□□□ -0.37
CALCOCO1-213ENST00000549349 ILDR2Q71H61 639 aa12.74□□□□□ -0.37
CALCOCO1-213ENST00000549349 FAM9BQ8IZU0 186 aa12.74□□□□□ -0.37
CALCOCO1-213ENST00000549349 DDX54Q8TDD1 881 aaKnown RBP12.74□□□□□ -0.37
CALCOCO1-213ENST00000549349 PHACTR3Q96KR7 559 aa12.74□□□□□ -0.37
CALCOCO1-213ENST00000549349 EP400Q96L91 3159 aa12.73□□□□□ -0.37
CALCOCO1-213ENST00000549349 CCER2I3L3R5 266 aa12.73□□□□□ -0.37
CALCOCO1-213ENST00000549349 MARCH10Q8NA82 808 aaPredicted RBP12.73□□□□□ -0.37
CALCOCO1-213ENST00000549349 ZCRB1Q8TBF4 217 aaKnown RBP12.73□□□□□ -0.37
CALCOCO1-213ENST00000549349 PLEKHF1Q96S99 279 aa12.73□□□□□ -0.37
CALCOCO1-213ENST00000549349 DOT1LQ8TEK3 1739 aa12.73□□□□□ -0.37
CALCOCO1-213ENST00000549349 TOGARAM1Q9Y4F4 1720 aa12.73□□□□□ -0.37
CALCOCO1-213ENST00000549349 TNS2Q63HR2 1409 aa12.72□□□□□ -0.37
CALCOCO1-213ENST00000549349 FCHSD2O94868 740 aa12.72□□□□□ -0.37
CALCOCO1-213ENST00000549349 MTHFSDQ2M296 383 aaKnown RBP12.72□□□□□ -0.37
CALCOCO1-213ENST00000549349 CDCA7Q9BWT1 371 aaPredicted RBP12.72□□□□□ -0.37
CALCOCO1-213ENST00000549349 CYP27B1O15528 508 aa12.71□□□□□ -0.37
CALCOCO1-213ENST00000549349 PDE3BQ13370 1112 aa12.71□□□□□ -0.37
CALCOCO1-213ENST00000549349 PLEKHO1Q53GL0 409 aaPredicted RBP12.71□□□□□ -0.37
CALCOCO1-213ENST00000549349 KRT27Q7Z3Y8 459 aa12.71□□□□□ -0.37
CALCOCO1-213ENST00000549349 ZNF530Q6P9A1 599 aaPredicted RBP12.7□□□□□ -0.38
CALCOCO1-213ENST00000549349 SPG7Q9UQ90 795 aa12.69□□□□□ -0.38
CALCOCO1-213ENST00000549349 BTAF1O14981 1849 aa12.68□□□□□ -0.38
CALCOCO1-213ENST00000549349 PHKG2P15735 406 aa12.68□□□□□ -0.38
CALCOCO1-213ENST00000549349 ACSBG1Q96GR2 724 aa12.68□□□□□ -0.38
CALCOCO1-213ENST00000549349 RRP7AQ9Y3A4 280 aaKnown RBP12.68□□□□□ -0.38
CALCOCO1-213ENST00000549349 PCDH11XQ9BZA7 1347 aa12.67□□□□□ -0.38
CALCOCO1-213ENST00000549349 PCDH11YQ9BZA8 1340 aa12.67□□□□□ -0.38
CALCOCO1-213ENST00000549349 SIPA1L3O60292 1781 aaPredicted RBP12.67□□□□□ -0.38
CALCOCO1-213ENST00000549349 NEUROD2Q15784 382 aa12.67□□□□□ -0.38
CALCOCO1-213ENST00000549349 AMOTQ4VCS5 1084 aa12.67□□□□□ -0.38
CALCOCO1-213ENST00000549349 IFNL2Q8IZJ0 200 aa12.67□□□□□ -0.38
CALCOCO1-213ENST00000549349 RUNDC1Q96C34 613 aa12.67□□□□□ -0.38
CALCOCO1-213ENST00000549349 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.67□□□□□ -0.38
CALCOCO1-213ENST00000549349 APAF1O14727 1248 aa12.66□□□□□ -0.38
CALCOCO1-213ENST00000549349 C1orf141Q5JVX7 400 aa12.66□□□□□ -0.38
CALCOCO1-213ENST00000549349 MPRIPQ6WCQ1 1025 aa12.66□□□□□ -0.38
CALCOCO1-213ENST00000549349 PTF1AQ7RTS3 328 aa12.66□□□□□ -0.38
CALCOCO1-213ENST00000549349 PNNQ9H307 717 aaKnown RBP12.66□□□□□ -0.38
CALCOCO1-213ENST00000549349 LGR6Q9HBX8 967 aa12.66□□□□□ -0.38
CALCOCO1-213ENST00000549349 MAPK8IP3Q9UPT6 1336 aa12.65□□□□□ -0.38
CALCOCO1-213ENST00000549349 KDM6AO15550 1401 aaPredicted RBP12.65□□□□□ -0.38
CALCOCO1-213ENST00000549349 NHSQ6T4R5 1651 aa12.65□□□□□ -0.38
CALCOCO1-213ENST00000549349 ADAMTS7Q9UKP4 1686 aa12.65□□□□□ -0.38
CALCOCO1-213ENST00000549349 KCNQ2O43526 872 aa12.65□□□□□ -0.38
CALCOCO1-213ENST00000549349 NEFMP07197 916 aa12.65□□□□□ -0.38
CALCOCO1-213ENST00000549349 TMPOP42166 694 aaKnown RBP12.65□□□□□ -0.38
CALCOCO1-213ENST00000549349 DCTN1Q14203 1278 aa12.65□□□□□ -0.38
CALCOCO1-213ENST00000549349 NFE2L2Q16236 605 aa12.65□□□□□ -0.38
CALCOCO1-213ENST00000549349 AKAP4Q5JQC9 854 aa12.65□□□□□ -0.38
CALCOCO1-213ENST00000549349 GAS2L2Q8NHY3 880 aa12.65□□□□□ -0.38
CALCOCO1-213ENST00000549349 SALL2Q9Y467 1007 aaPredicted RBP12.65□□□□□ -0.38
CALCOCO1-213ENST00000549349 TNS1Q9HBL0 1735 aaKnown RBP12.65□□□□□ -0.38
CALCOCO1-213ENST00000549349 RNMTO43148 476 aaKnown RBP12.63□□□□□ -0.39
CALCOCO1-213ENST00000549349 RIPK4P57078 832 aa12.63□□□□□ -0.39
CALCOCO1-213ENST00000549349 NKX1-1Q15270 411 aaPredicted RBP12.63□□□□□ -0.39
CALCOCO1-213ENST00000549349 MCM10Q7L590 875 aa12.63□□□□□ -0.39
CALCOCO1-213ENST00000549349 IL17REQ8NFR9 667 aa12.63□□□□□ -0.39
CALCOCO1-213ENST00000549349 MAP3K5Q99683 1374 aa12.63□□□□□ -0.39
CALCOCO1-213ENST00000549349 PLEKHG2Q9H7P9 1386 aa12.62□□□□□ -0.39
CALCOCO1-213ENST00000549349 GNAT3A8MTJ3 354 aa12.62□□□□□ -0.39
CALCOCO1-213ENST00000549349 TRIM37O94972 964 aa12.62□□□□□ -0.39
CALCOCO1-213ENST00000549349 PRIM1P49642 420 aaKnown RBP12.62□□□□□ -0.39
CALCOCO1-213ENST00000549349 FAM196AQ6ZSG2 479 aa12.62□□□□□ -0.39
CALCOCO1-213ENST00000549349 THUMPD2Q9BTF0 503 aaKnown RBP12.62□□□□□ -0.39
CALCOCO1-213ENST00000549349 SYTL4Q96C24 671 aaPredicted RBP12.61□□□□□ -0.39
CALCOCO1-213ENST00000549349 TRIM35Q9UPQ4 493 aa12.61□□□□□ -0.39
CALCOCO1-213ENST00000549349 DCAF5Q96JK2 942 aa12.6□□□□□ -0.39
CALCOCO1-213ENST00000549349 HSP90AB1P08238 724 aaKnown RBP12.59□□□□□ -0.39
CALCOCO1-213ENST00000549349 NFATC2IPQ8NCF5 419 aa12.59□□□□□ -0.39
CALCOCO1-213ENST00000549349 RTF1Q92541 710 aaKnown RBP12.59□□□□□ -0.39
CALCOCO1-213ENST00000549349 BCL9O00512 1426 aa12.59□□□□□ -0.39
CALCOCO1-213ENST00000549349 TAF1LQ8IZX4 1826 aa12.58□□□□□ -0.4
CALCOCO1-213ENST00000549349 LY75O60449 1722 aa12.58□□□□□ -0.4
CALCOCO1-213ENST00000549349 PIGBQ92521 554 aa12.58□□□□□ -0.4
CALCOCO1-213ENST00000549349 KDM3BQ7LBC6 1761 aa12.58□□□□□ -0.4
CALCOCO1-213ENST00000549349 ERVV-2B6SEH9 535 aa12.57□□□□□ -0.4
CALCOCO1-213ENST00000549349 CABP4P57796 275 aa12.57□□□□□ -0.4
CALCOCO1-213ENST00000549349 SLC52A2Q9HAB3 445 aa12.57□□□□□ -0.4
CALCOCO1-213ENST00000549349 MIS18AQ9NYP9 233 aa12.57□□□□□ -0.4
CALCOCO1-213ENST00000549349 PAPPAQ13219 1627 aa12.57□□□□□ -0.4
CALCOCO1-213ENST00000549349 CEMIPQ8WUJ3 1361 aa12.56□□□□□ -0.4
CALCOCO1-213ENST00000549349 UBR2Q8IWV8 1755 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms