RNA–Protein interactions for RNA: ENST00000548916.1

NCKAP1L-205, Transcript of NCK associated protein 1 like, humanhuman

TSL 3

Gene NCKAP1L, Length 708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-205ENST00000548916 CFAP99D6REC4 459 aa9.95□□□□□ -0.82
NCKAP1L-205ENST00000548916 SV2AQ7L0J3 742 aa9.95□□□□□ -0.82
NCKAP1L-205ENST00000548916 C6orf229H3BNL8 230 aa9.94□□□□□ -0.82
NCKAP1L-205ENST00000548916 ADAMTS2O95450 1211 aa9.94□□□□□ -0.82
NCKAP1L-205ENST00000548916 PODNQ7Z5L7 613 aa9.94□□□□□ -0.82
NCKAP1L-205ENST00000548916 TRIM34Q9BYJ4 488 aa9.94□□□□□ -0.82
NCKAP1L-205ENST00000548916 HMX1Q9NP08 348 aaPredicted RBP9.94□□□□□ -0.82
NCKAP1L-205ENST00000548916 NR3C2P08235 984 aa9.93□□□□□ -0.82
NCKAP1L-205ENST00000548916 IRF5Q13568 498 aa9.93□□□□□ -0.82
NCKAP1L-205ENST00000548916 LYPD4Q6UWN0 246 aa9.93□□□□□ -0.82
NCKAP1L-205ENST00000548916 VWA5B2Q8N398 1253 aa9.93□□□□□ -0.82
NCKAP1L-205ENST00000548916 ITGB2P05107 769 aa9.92□□□□□ -0.82
NCKAP1L-205ENST00000548916 POM121CA8CG34 1229 aa9.91□□□□□ -0.82
NCKAP1L-205ENST00000548916 GPR37L1O60883 481 aa9.91□□□□□ -0.82
NCKAP1L-205ENST00000548916 ITGA6P23229 1130 aa9.91□□□□□ -0.82
NCKAP1L-205ENST00000548916 BEND7Q8N7W2 519 aaPredicted RBP9.91□□□□□ -0.82
NCKAP1L-205ENST00000548916 LRRN4Q8WUT4 740 aa9.91□□□□□ -0.82
NCKAP1L-205ENST00000548916 SRSF11Q05519 484 aaKnown RBP9.9□□□□□ -0.82
NCKAP1L-205ENST00000548916 WASHC4Q2M389 1173 aa9.9□□□□□ -0.82
NCKAP1L-205ENST00000548916 PRR7Q8TB68 274 aa9.9□□□□□ -0.82
NCKAP1L-205ENST00000548916 CALR3Q96L12 384 aaKnown RBP9.9□□□□□ -0.82
NCKAP1L-205ENST00000548916 CELA2BP08218 269 aaPredicted RBP9.89□□□□□ -0.83
NCKAP1L-205ENST00000548916 LCE3BQ5TA77 95 aa9.89□□□□□ -0.83
NCKAP1L-205ENST00000548916 TSC1Q92574 1164 aa9.89□□□□□ -0.83
NCKAP1L-205ENST00000548916 GLMNQ92990 594 aa9.89□□□□□ -0.83
NCKAP1L-205ENST00000548916 FIGNL2A6NMB9 653 aa9.88□□□□□ -0.83
NCKAP1L-205ENST00000548916 PDIA4P13667 645 aaKnown RBP9.88□□□□□ -0.83
NCKAP1L-205ENST00000548916 DESI1Q6ICB0 168 aa9.88□□□□□ -0.83
NCKAP1L-205ENST00000548916 CNTNAP5Q8WYK1 1306 aa9.87□□□□□ -0.83
NCKAP1L-205ENST00000548916 SLC35F4A4IF30 521 aa9.87□□□□□ -0.83
NCKAP1L-205ENST00000548916 TRIM26Q12899 539 aaPredicted RBP9.87□□□□□ -0.83
NCKAP1L-205ENST00000548916 BAG6P46379 1132 aa9.86□□□□□ -0.83
NCKAP1L-205ENST00000548916 NESP48681 1621 aa9.85□□□□□ -0.83
NCKAP1L-205ENST00000548916 GRM5P41594 1212 aa9.85□□□□□ -0.83
NCKAP1L-205ENST00000548916 EPS8L1Q8TE68 723 aa9.85□□□□□ -0.83
NCKAP1L-205ENST00000548916 ERCC6Q03468 1493 aa9.85□□□□□ -0.83
NCKAP1L-205ENST00000548916 PER1O15534 1290 aaPredicted RBP9.84□□□□□ -0.83
NCKAP1L-205ENST00000548916 HDGFL1Q5TGJ6 251 aa9.84□□□□□ -0.83
NCKAP1L-205ENST00000548916 PODXL2Q9NZ53 605 aa9.84□□□□□ -0.83
NCKAP1L-205ENST00000548916 PPP1R15AO75807 674 aaPredicted RBP9.83□□□□□ -0.84
NCKAP1L-205ENST00000548916 CTHP32929 405 aa9.83□□□□□ -0.84
NCKAP1L-205ENST00000548916 AGERQ15109 404 aa9.83□□□□□ -0.84
NCKAP1L-205ENST00000548916 SH3RF1Q7Z6J0 888 aa9.83□□□□□ -0.84
NCKAP1L-205ENST00000548916 ADAMTS19Q8TE59 1207 aa9.83□□□□□ -0.84
NCKAP1L-205ENST00000548916 FOXJ1Q92949 421 aa9.83□□□□□ -0.84
NCKAP1L-205ENST00000548916 CUX2O14529 1486 aa9.83□□□□□ -0.84
NCKAP1L-205ENST00000548916 NR6A1Q15406 480 aa9.82□□□□□ -0.84
NCKAP1L-205ENST00000548916 LYPD8Q6UX82 237 aa9.82□□□□□ -0.84
NCKAP1L-205ENST00000548916 NEDD1Q8NHV4 660 aa9.82□□□□□ -0.84
NCKAP1L-205ENST00000548916 EMILIN1Q9Y6C2 1016 aa9.82□□□□□ -0.84
NCKAP1L-205ENST00000548916 VAC14Q08AM6 782 aa9.81□□□□□ -0.84
NCKAP1L-205ENST00000548916 TRAIPQ9BWF2 469 aa9.81□□□□□ -0.84
NCKAP1L-205ENST00000548916 ALG2Q9H553 416 aa9.81□□□□□ -0.84
NCKAP1L-205ENST00000548916 BTBD11A6QL63 1104 aa9.8□□□□□ -0.84
NCKAP1L-205ENST00000548916 FURINP09958 794 aa9.8□□□□□ -0.84
NCKAP1L-205ENST00000548916 FSHRP23945 695 aa9.8□□□□□ -0.84
NCKAP1L-205ENST00000548916 NCAPD3P42695 1498 aa9.79□□□□□ -0.84
NCKAP1L-205ENST00000548916 SOX11P35716 441 aa9.79□□□□□ -0.84
NCKAP1L-205ENST00000548916 ATAD2BQ9ULI0 1458 aa9.79□□□□□ -0.84
NCKAP1L-205ENST00000548916 SPINT1O43278 529 aa9.78□□□□□ -0.84
NCKAP1L-205ENST00000548916 BPHLQ86WA6 291 aaPredicted RBP9.78□□□□□ -0.84
NCKAP1L-205ENST00000548916 PNMA1Q8ND90 353 aa9.77□□□□□ -0.85
NCKAP1L-205ENST00000548916 ACIN1Q9UKV3 1341 aaKnown RBP9.76□□□□□ -0.85
NCKAP1L-205ENST00000548916 CFAP70Q5T0N1 1121 aa9.75□□□□□ -0.85
NCKAP1L-205ENST00000548916 CCDC116Q8IYX3 515 aa9.75□□□□□ -0.85
NCKAP1L-205ENST00000548916 RETREG2Q8NC44 543 aa9.75□□□□□ -0.85
NCKAP1L-205ENST00000548916 KRTAP4-12Q9BQ66 201 aa9.75□□□□□ -0.85
NCKAP1L-205ENST00000548916 PPP1R12CQ9BZL4 782 aa9.75□□□□□ -0.85
NCKAP1L-205ENST00000548916 F12P00748 615 aaPredicted RBP9.74□□□□□ -0.85
NCKAP1L-205ENST00000548916 SRPK2P78362 688 aaKnown RBP9.74□□□□□ -0.85
NCKAP1L-205ENST00000548916 VASH1Q7L8A9 365 aaPredicted RBP9.74□□□□□ -0.85
NCKAP1L-205ENST00000548916 PBXIP1Q96AQ6 731 aa9.74□□□□□ -0.85
NCKAP1L-205ENST00000548916 MAP4K5Q9Y4K4 846 aa9.74□□□□□ -0.85
NCKAP1L-205ENST00000548916 ZBTB7CA1YPR0 619 aa9.73□□□□□ -0.85
NCKAP1L-205ENST00000548916 BCRP11274 1271 aa9.73□□□□□ -0.85
NCKAP1L-205ENST00000548916 GAS6Q14393 721 aa9.73□□□□□ -0.85
NCKAP1L-205ENST00000548916 SMARCA4P51532 1647 aa9.72□□□□□ -0.85
NCKAP1L-205ENST00000548916 C4orf48Q5BLP8 95 aa9.72□□□□□ -0.85
NCKAP1L-205ENST00000548916 ALYREFQ86V81 257 aaKnown RBP9.72□□□□□ -0.85
NCKAP1L-205ENST00000548916 MBIPQ9NS73 344 aa9.72□□□□□ -0.85
NCKAP1L-205ENST00000548916 PGPEP1Q9NXJ5 209 aa9.72□□□□□ -0.85
NCKAP1L-205ENST00000548916 PALM3A6NDB9 673 aaPredicted RBP9.71□□□□□ -0.86
NCKAP1L-205ENST00000548916 EIF4G2P78344 907 aaKnown RBP eCLIP9.71□□□□□ -0.86
NCKAP1L-205ENST00000548916 PDE4CQ08493 712 aa9.71□□□□□ -0.86
NCKAP1L-205ENST00000548916 NR1H3Q13133 447 aa9.71□□□□□ -0.86
NCKAP1L-205ENST00000548916 SEMA3FQ13275 785 aa9.71□□□□□ -0.86
NCKAP1L-205ENST00000548916 UCN2Q96RP3 112 aa9.71□□□□□ -0.86
NCKAP1L-205ENST00000548916 FKBPLQ9UIM3 349 aa9.71□□□□□ -0.86
NCKAP1L-205ENST00000548916 ZC3H4Q9UPT8 1303 aaKnown RBP9.71□□□□□ -0.86
NCKAP1L-205ENST00000548916 THOC2Q8NI27 1593 aaKnown RBP9.7□□□□□ -0.86
NCKAP1L-205ENST00000548916 Q6ZVU0 165 aa9.69□□□□□ -0.86
NCKAP1L-205ENST00000548916 TFIP11Q9UBB9 837 aaKnown RBP9.69□□□□□ -0.86
NCKAP1L-205ENST00000548916 SMARCA2P51531 1590 aa9.68□□□□□ -0.86
NCKAP1L-205ENST00000548916 HMGXB3Q12766 1538 aa9.68□□□□□ -0.86
NCKAP1L-205ENST00000548916 IGF1RP08069 1367 aa9.68□□□□□ -0.86
NCKAP1L-205ENST00000548916 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.68□□□□□ -0.86
NCKAP1L-205ENST00000548916 KRBA1A5PL33 1030 aa9.68□□□□□ -0.86
NCKAP1L-205ENST00000548916 ZBBXA8MT70 800 aa9.68□□□□□ -0.86
NCKAP1L-205ENST00000548916 FBXO45P0C2W1 286 aa9.68□□□□□ -0.86
NCKAP1L-205ENST00000548916 RFX1P22670 979 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms