RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 FCHSD2O94868 740 aa28.13■■■□□ 2.09
CACNB3-210ENST00000548874 TATP17735 454 aaPredicted RBP28.13■■■□□ 2.09
CACNB3-210ENST00000548874 WDR43Q15061 677 aaKnown RBP eCLIP28.12■■■□□ 2.09
CACNB3-210ENST00000548874 SEPT12Q8IYM1 358 aa28.12■■■□□ 2.09
CACNB3-210ENST00000548874 PKD1L3Q7Z443 1732 aa28.11■■■□□ 2.09
CACNB3-210ENST00000548874 TNS2Q63HR2 1409 aa28.1■■■□□ 2.09
CACNB3-210ENST00000548874 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.09■■■□□ 2.09
CACNB3-210ENST00000548874 ADAMTS8Q9UP79 889 aa28.09■■■□□ 2.09
CACNB3-210ENST00000548874 PRKAR2BP31323 418 aa28.08■■■□□ 2.09
CACNB3-210ENST00000548874 DDB1Q16531 1140 aa28.08■■■□□ 2.09
CACNB3-210ENST00000548874 SHANK3Q9BYB0 1731 aa28.07■■■□□ 2.08
CACNB3-210ENST00000548874 A0A0G2JS52 829 aa28.07■■■□□ 2.08
CACNB3-210ENST00000548874 MYT1Q01538 1121 aa28.07■■■□□ 2.08
CACNB3-210ENST00000548874 EXOC5O00471 708 aa28.06■■■□□ 2.08
CACNB3-210ENST00000548874 ZCRB1Q8TBF4 217 aaKnown RBP28.06■■■□□ 2.08
CACNB3-210ENST00000548874 PLEKHF1Q96S99 279 aa28.06■■■□□ 2.08
CACNB3-210ENST00000548874 BRWD3Q6RI45 1802 aa28.04■■■□□ 2.08
CACNB3-210ENST00000548874 AMOTQ4VCS5 1084 aa28.03■■■□□ 2.08
CACNB3-210ENST00000548874 PLEKHO1Q53GL0 409 aaPredicted RBP28.03■■■□□ 2.08
CACNB3-210ENST00000548874 PNNQ9H307 717 aaKnown RBP28.03■■■□□ 2.08
CACNB3-210ENST00000548874 SPG7Q9UQ90 795 aa28.03■■■□□ 2.08
CACNB3-210ENST00000548874 PHACTR3Q96KR7 559 aa28.02■■■□□ 2.08
CACNB3-210ENST00000548874 PCDH11XQ9BZA7 1347 aa28■■■□□ 2.07
CACNB3-210ENST00000548874 PCDH11YQ9BZA8 1340 aa28■■■□□ 2.07
CACNB3-210ENST00000548874 PDE3BQ13370 1112 aa27.99■■■□□ 2.07
CACNB3-210ENST00000548874 CYP27B1O15528 508 aa27.98■■■□□ 2.07
CACNB3-210ENST00000548874 MTHFSDQ2M296 383 aaKnown RBP27.98■■■□□ 2.07
CACNB3-210ENST00000548874 KRT27Q7Z3Y8 459 aa27.98■■■□□ 2.07
CACNB3-210ENST00000548874 MARCH10Q8NA82 808 aaPredicted RBP27.98■■■□□ 2.07
CACNB3-210ENST00000548874 FAM9BQ8IZU0 186 aa27.97■■■□□ 2.07
CACNB3-210ENST00000548874 RUNDC1Q96C34 613 aa27.97■■■□□ 2.07
CACNB3-210ENST00000548874 ZNF530Q6P9A1 599 aaPredicted RBP27.96■■■□□ 2.07
CACNB3-210ENST00000548874 CCDC146Q8IYE0 955 aa27.96■■■□□ 2.07
CACNB3-210ENST00000548874 DDX54Q8TDD1 881 aaKnown RBP27.96■■■□□ 2.07
CACNB3-210ENST00000548874 PHKG2P15735 406 aa27.95■■■□□ 2.06
CACNB3-210ENST00000548874 GAS2L2Q8NHY3 880 aa27.95■■■□□ 2.06
CACNB3-210ENST00000548874 MAPK8IP3Q9UPT6 1336 aa27.94■■■□□ 2.06
CACNB3-210ENST00000548874 NEFMP07197 916 aa27.94■■■□□ 2.06
CACNB3-210ENST00000548874 IFNL2Q8IZJ0 200 aa27.94■■■□□ 2.06
CACNB3-210ENST00000548874 BCL9O00512 1426 aa27.93■■■□□ 2.06
CACNB3-210ENST00000548874 NKX1-1Q15270 411 aaPredicted RBP27.92■■■□□ 2.06
CACNB3-210ENST00000548874 AKAP4Q5JQC9 854 aa27.91■■■□□ 2.06
CACNB3-210ENST00000548874 NFE2L2Q16236 605 aa27.9■■■□□ 2.06
CACNB3-210ENST00000548874 C1orf141Q5JVX7 400 aa27.89■■■□□ 2.06
CACNB3-210ENST00000548874 FAM182BQ5T319 152 aa27.89■■■□□ 2.06
CACNB3-210ENST00000548874 MAP3K5Q99683 1374 aa27.88■■■□□ 2.05
CACNB3-210ENST00000548874 TMPOP42166 694 aaKnown RBP27.87■■■□□ 2.05
CACNB3-210ENST00000548874 ADAMTS7Q9UKP4 1686 aa27.87■■■□□ 2.05
CACNB3-210ENST00000548874 KDM6AO15550 1401 aaPredicted RBP27.86■■■□□ 2.05
CACNB3-210ENST00000548874 HSP90AB1P08238 724 aaKnown RBP27.86■■■□□ 2.05
CACNB3-210ENST00000548874 FAM196AQ6ZSG2 479 aa27.86■■■□□ 2.05
CACNB3-210ENST00000548874 GNAT3A8MTJ3 354 aa27.85■■■□□ 2.05
CACNB3-210ENST00000548874 APAF1O14727 1248 aa27.85■■■□□ 2.05
CACNB3-210ENST00000548874 DLG5Q8TDM6 1919 aa27.84■■■□□ 2.05
CACNB3-210ENST00000548874 TOGARAM1Q9Y4F4 1720 aa27.84■■■□□ 2.05
CACNB3-210ENST00000548874 ILDR2Q71H61 639 aa27.84■■■□□ 2.05
CACNB3-210ENST00000548874 DCAF5Q96JK2 942 aa27.84■■■□□ 2.05
CACNB3-210ENST00000548874 DOT1LQ8TEK3 1739 aa27.82■■■□□ 2.04
CACNB3-210ENST00000548874 HTATSF1O43719 755 aaKnown RBP27.82■■■□□ 2.04
CACNB3-210ENST00000548874 MPRIPQ6WCQ1 1025 aa27.82■■■□□ 2.04
CACNB3-210ENST00000548874 SCN11AQ9UI33 1791 aa27.81■■■□□ 2.04
CACNB3-210ENST00000548874 RIPK4P57078 832 aa27.81■■■□□ 2.04
CACNB3-210ENST00000548874 RRP7AQ9Y3A4 280 aaKnown RBP27.81■■■□□ 2.04
CACNB3-210ENST00000548874 SBF2Q86WG5 1849 aa27.81■■■□□ 2.04
CACNB3-210ENST00000548874 RNMTO43148 476 aaKnown RBP27.8■■■□□ 2.04
CACNB3-210ENST00000548874 NHSQ6T4R5 1651 aa27.79■■■□□ 2.04
CACNB3-210ENST00000548874 CEMIPQ8WUJ3 1361 aa27.79■■■□□ 2.04
CACNB3-210ENST00000548874 IL17REQ8NFR9 667 aa27.79■■■□□ 2.04
CACNB3-210ENST00000548874 LGR6Q9HBX8 967 aa27.79■■■□□ 2.04
CACNB3-210ENST00000548874 MRC1P22897 1456 aa27.78■■■□□ 2.04
CACNB3-210ENST00000548874 NCBP3Q53F19 620 aaKnown RBP27.78■■■□□ 2.04
CACNB3-210ENST00000548874 VIRMAQ69YN4 1812 aaKnown RBP27.78■■■□□ 2.04
CACNB3-210ENST00000548874 ERVV-2B6SEH9 535 aa27.77■■■□□ 2.04
CACNB3-210ENST00000548874 NEUROD2Q15784 382 aa27.77■■■□□ 2.04
CACNB3-210ENST00000548874 TRIM35Q9UPQ4 493 aa27.77■■■□□ 2.04
CACNB3-210ENST00000548874 LMOD3Q0VAK6 560 aa27.76■■■□□ 2.03
CACNB3-210ENST00000548874 RTF1Q92541 710 aaKnown RBP27.76■■■□□ 2.03
CACNB3-210ENST00000548874 ACSBG1Q96GR2 724 aa27.76■■■□□ 2.03
CACNB3-210ENST00000548874 ITGB4P16144 1822 aa27.74■■■□□ 2.03
CACNB3-210ENST00000548874 KCNQ2O43526 872 aa27.74■■■□□ 2.03
CACNB3-210ENST00000548874 PRIM1P49642 420 aaKnown RBP27.74■■■□□ 2.03
CACNB3-210ENST00000548874 DCTN1Q14203 1278 aa27.74■■■□□ 2.03
CACNB3-210ENST00000548874 MCM10Q7L590 875 aa27.74■■■□□ 2.03
CACNB3-210ENST00000548874 CCDC27Q2M243 656 aa27.73■■■□□ 2.03
CACNB3-210ENST00000548874 NGEFQ8N5V2 710 aa27.72■■■□□ 2.03
CACNB3-210ENST00000548874 BCL11BQ9C0K0 894 aaPredicted RBP27.72■■■□□ 2.03
CACNB3-210ENST00000548874 SLC52A2Q9HAB3 445 aa27.72■■■□□ 2.03
CACNB3-210ENST00000548874 SENP3-EIF4A1A0A087X0R7 540 aa27.71■■■□□ 2.03
CACNB3-210ENST00000548874 TRIM37O94972 964 aa27.71■■■□□ 2.03
CACNB3-210ENST00000548874 PTF1AQ7RTS3 328 aa27.71■■■□□ 2.03
CACNB3-210ENST00000548874 EP400Q96L91 3159 aa27.7■■■□□ 2.02
CACNB3-210ENST00000548874 CABP4P57796 275 aa27.7■■■□□ 2.02
CACNB3-210ENST00000548874 THUMPD2Q9BTF0 503 aaKnown RBP27.7■■■□□ 2.02
CACNB3-210ENST00000548874 SIPA1L3O60292 1781 aaPredicted RBP27.7■■■□□ 2.02
CACNB3-210ENST00000548874 PIGBQ92521 554 aa27.69■■■□□ 2.02
CACNB3-210ENST00000548874 SYTL4Q96C24 671 aaPredicted RBP27.69■■■□□ 2.02
CACNB3-210ENST00000548874 TMOD3Q9NYL9 352 aa27.69■■■□□ 2.02
CACNB3-210ENST00000548874 TNS1Q9HBL0 1735 aaKnown RBP27.69■■■□□ 2.02
CACNB3-210ENST00000548874 NFATC2IPQ8NCF5 419 aa27.68■■■□□ 2.02
CACNB3-210ENST00000548874 BTAF1O14981 1849 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms