RNA–Protein interactions for RNA: ENST00000548496.1

KRT18-205, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-205ENST00000548496 ZCRB1Q8TBF4 217 aaKnown RBP16.25■□□□□ 0.19
KRT18-205ENST00000548496 RGPD1P0DJD0 1748 aa16.25■□□□□ 0.19
KRT18-205ENST00000548496 U2AF1L5P0DN76 240 aaPredicted RBP16.23■□□□□ 0.19
KRT18-205ENST00000548496 U2AF1Q01081 240 aaKnown RBP eCLIP16.23■□□□□ 0.19
KRT18-205ENST00000548496 NUDCQ9Y266 331 aa16.22■□□□□ 0.19
KRT18-205ENST00000548496 SHANK3Q9BYB0 1731 aa16.22■□□□□ 0.19
KRT18-205ENST00000548496 OVOS2A0A0G2JMS6 1433 aa16.21■□□□□ 0.19
KRT18-205ENST00000548496 NCAPD2Q15021 1401 aa16.21■□□□□ 0.19
KRT18-205ENST00000548496 TNS2Q63HR2 1409 aa16.21■□□□□ 0.19
KRT18-205ENST00000548496 PTF1AQ7RTS3 328 aa16.21■□□□□ 0.19
KRT18-205ENST00000548496 ACSBG1Q96GR2 724 aa16.21■□□□□ 0.19
KRT18-205ENST00000548496 TRIM37O94972 964 aa16.2■□□□□ 0.18
KRT18-205ENST00000548496 UPF1Q92900 1129 aaKnown RBP eCLIP16.2■□□□□ 0.18
KRT18-205ENST00000548496 CYP27B1O15528 508 aa16.19■□□□□ 0.18
KRT18-205ENST00000548496 FAM196AQ6ZSG2 479 aa16.19■□□□□ 0.18
KRT18-205ENST00000548496 SOCS7O14512 581 aa16.18■□□□□ 0.18
KRT18-205ENST00000548496 KCNQ2O43526 872 aa16.18■□□□□ 0.18
KRT18-205ENST00000548496 PRKAR2BP31323 418 aa16.18■□□□□ 0.18
KRT18-205ENST00000548496 PLEKHO1Q53GL0 409 aaPredicted RBP16.18■□□□□ 0.18
KRT18-205ENST00000548496 DIEXFQ68CQ4 756 aaKnown RBP16.18■□□□□ 0.18
KRT18-205ENST00000548496 SPG7Q9UQ90 795 aa16.18■□□□□ 0.18
KRT18-205ENST00000548496 KDRP35968 1356 aa16.17■□□□□ 0.18
KRT18-205ENST00000548496 ZNF530Q6P9A1 599 aaPredicted RBP16.17■□□□□ 0.18
KRT18-205ENST00000548496 PHACTR3Q96KR7 559 aa16.17■□□□□ 0.18
KRT18-205ENST00000548496 RSPH6AQ9H0K4 717 aa16.17■□□□□ 0.18
KRT18-205ENST00000548496 SBF2Q86WG5 1849 aa16.17■□□□□ 0.18
KRT18-205ENST00000548496 MTHFSDQ2M296 383 aaKnown RBP16.16■□□□□ 0.18
KRT18-205ENST00000548496 PKD1L3Q7Z443 1732 aa16.16■□□□□ 0.18
KRT18-205ENST00000548496 SYTL4Q96C24 671 aaPredicted RBP16.15■□□□□ 0.18
KRT18-205ENST00000548496 MRS2Q9HD23 443 aa16.15■□□□□ 0.18
KRT18-205ENST00000548496 PCDH11XQ9BZA7 1347 aa16.15■□□□□ 0.18
KRT18-205ENST00000548496 PCDH11YQ9BZA8 1340 aa16.15■□□□□ 0.18
KRT18-205ENST00000548496 SENP3-EIF4A1A0A087X0R7 540 aa16.14■□□□□ 0.17
KRT18-205ENST00000548496 PHKG2P15735 406 aa16.14■□□□□ 0.17
KRT18-205ENST00000548496 CCDC146Q8IYE0 955 aa16.14■□□□□ 0.17
KRT18-205ENST00000548496 FCHSD2O94868 740 aa16.13■□□□□ 0.17
KRT18-205ENST00000548496 PRIM1P49642 420 aaKnown RBP16.13■□□□□ 0.17
KRT18-205ENST00000548496 WDR43Q15061 677 aaKnown RBP eCLIP16.13■□□□□ 0.173e-6■□□□□ 9
KRT18-205ENST00000548496 AMOTQ4VCS5 1084 aa16.13■□□□□ 0.17
KRT18-205ENST00000548496 MPRIPQ6WCQ1 1025 aa16.13■□□□□ 0.17
KRT18-205ENST00000548496 DEFB132Q7Z7B7 95 aa16.13■□□□□ 0.17
KRT18-205ENST00000548496 IFNL2Q8IZJ0 200 aa16.13■□□□□ 0.17
KRT18-205ENST00000548496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.13■□□□□ 0.17
KRT18-205ENST00000548496 ADAMTS8Q9UP79 889 aa16.13■□□□□ 0.17
KRT18-205ENST00000548496 DOT1LQ8TEK3 1739 aa16.11■□□□□ 0.17
KRT18-205ENST00000548496 APBA3O96018 575 aa16.11■□□□□ 0.17
KRT18-205ENST00000548496 C1orf141Q5JVX7 400 aa16.11■□□□□ 0.17
KRT18-205ENST00000548496 EN1Q05925 392 aaPredicted RBP16.1■□□□□ 0.17
KRT18-205ENST00000548496 SF3B2Q13435 895 aaKnown RBP16.1■□□□□ 0.17
KRT18-205ENST00000548496 MIER1Q8N108 512 aa16.1■□□□□ 0.17
KRT18-205ENST00000548496 LGR6Q9HBX8 967 aa16.1■□□□□ 0.17
KRT18-205ENST00000548496 TOGARAM1Q9Y4F4 1720 aa16.09■□□□□ 0.17
KRT18-205ENST00000548496 PLEKHF1Q96S99 279 aa16.09■□□□□ 0.17
KRT18-205ENST00000548496 ITGB4P16144 1822 aa16.09■□□□□ 0.17
KRT18-205ENST00000548496 TNS1Q9HBL0 1735 aaKnown RBP16.08■□□□□ 0.17
KRT18-205ENST00000548496 VIRMAQ69YN4 1812 aaKnown RBP16.08■□□□□ 0.17
KRT18-205ENST00000548496 NKX1-1Q15270 411 aaPredicted RBP16.08■□□□□ 0.16
KRT18-205ENST00000548496 BCL11BQ9C0K0 894 aaPredicted RBP16.08■□□□□ 0.16
KRT18-205ENST00000548496 AKAP4Q5JQC9 854 aa16.07■□□□□ 0.16
KRT18-205ENST00000548496 FAM9BQ8IZU0 186 aa16.07■□□□□ 0.16
KRT18-205ENST00000548496 PNISRQ8TF01 805 aaKnown RBP16.07■□□□□ 0.16
KRT18-205ENST00000548496 RRP7AQ9Y3A4 280 aaKnown RBP16.07■□□□□ 0.16
KRT18-205ENST00000548496 BTAF1O14981 1849 aa16.07■□□□□ 0.16
KRT18-205ENST00000548496 DLG5Q8TDM6 1919 aa16.06■□□□□ 0.16
KRT18-205ENST00000548496 NHSQ6T4R5 1651 aa16.06■□□□□ 0.16
KRT18-205ENST00000548496 BCL9O00512 1426 aa16.06■□□□□ 0.16
KRT18-205ENST00000548496 KDM6AO15550 1401 aaPredicted RBP16.06■□□□□ 0.16
KRT18-205ENST00000548496 MAPK8IP3Q9UPT6 1336 aa16.06■□□□□ 0.16
KRT18-205ENST00000548496 DCTN1Q14203 1278 aa16.06■□□□□ 0.16
KRT18-205ENST00000548496 NEUROD2Q15784 382 aa16.06■□□□□ 0.16
KRT18-205ENST00000548496 EZH2Q15910 746 aaKnown RBP16.06■□□□□ 0.16
KRT18-205ENST00000548496 CCDC125Q86Z20 511 aa16.06■□□□□ 0.16
KRT18-205ENST00000548496 GAS2L2Q8NHY3 880 aa16.06■□□□□ 0.16
KRT18-205ENST00000548496 RNMTO43148 476 aaKnown RBP16.05■□□□□ 0.16
KRT18-205ENST00000548496 NEFMP07197 916 aa16.05■□□□□ 0.16
KRT18-205ENST00000548496 BAG6P46379 1132 aa16.05■□□□□ 0.16
KRT18-205ENST00000548496 IL17REQ8NFR9 667 aa16.05■□□□□ 0.16
KRT18-205ENST00000548496 PIGBQ92521 554 aa16.05■□□□□ 0.16
KRT18-205ENST00000548496 DCAF5Q96JK2 942 aa16.05■□□□□ 0.16
KRT18-205ENST00000548496 GNAT3A8MTJ3 354 aa16.04■□□□□ 0.16
KRT18-205ENST00000548496 HSP90AB1P08238 724 aaKnown RBP16.04■□□□□ 0.16
KRT18-205ENST00000548496 KCNQ4P56696 695 aa16.04■□□□□ 0.16
KRT18-205ENST00000548496 CABP4P57796 275 aa16.04■□□□□ 0.16
KRT18-205ENST00000548496 MCM10Q7L590 875 aa16.04■□□□□ 0.16
KRT18-205ENST00000548496 SCN11AQ9UI33 1791 aa16.04■□□□□ 0.16
KRT18-205ENST00000548496 NFATC2IPQ8NCF5 419 aa16.03■□□□□ 0.16
KRT18-205ENST00000548496 RUNDC1Q96C34 613 aa16.03■□□□□ 0.16
KRT18-205ENST00000548496 PNNQ9H307 717 aaKnown RBP16.03■□□□□ 0.16
KRT18-205ENST00000548496 TMOD3Q9NYL9 352 aa16.03■□□□□ 0.16
KRT18-205ENST00000548496 MAP3K5Q99683 1374 aa16.02■□□□□ 0.16
KRT18-205ENST00000548496 EP400Q96L91 3159 aa16.02■□□□□ 0.16
KRT18-205ENST00000548496 NFE2L2Q16236 605 aa16.02■□□□□ 0.16
KRT18-205ENST00000548496 CAMKK2Q96RR4 588 aa16.02■□□□□ 0.16
KRT18-205ENST00000548496 THUMPD2Q9BTF0 503 aaKnown RBP16.02■□□□□ 0.16
KRT18-205ENST00000548496 PLEKHG2Q9H7P9 1386 aa16.01■□□□□ 0.15
KRT18-205ENST00000548496 ERVV-2B6SEH9 535 aa16.01■□□□□ 0.15
KRT18-205ENST00000548496 APAF1O14727 1248 aa16.01■□□□□ 0.15
KRT18-205ENST00000548496 TMPOP42166 694 aaKnown RBP16.01■□□□□ 0.15
KRT18-205ENST00000548496 RIPK4P57078 832 aa16.01■□□□□ 0.15
KRT18-205ENST00000548496 PROM2Q8N271 834 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms