RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 U2AF1Q01081 240 aaKnown RBP eCLIP23.08■■□□□ 1.29
LETMD1-216ENST00000548401 MRS2Q9HD23 443 aa23.08■■□□□ 1.29
LETMD1-216ENST00000548401 TATP17735 454 aaPredicted RBP23.07■■□□□ 1.28
LETMD1-216ENST00000548401 A0A0G2JS52 829 aa23.06■■□□□ 1.28
LETMD1-216ENST00000548401 MYT1Q01538 1121 aa23.06■■□□□ 1.28
LETMD1-216ENST00000548401 DDB1Q16531 1140 aa23.05■■□□□ 1.28
LETMD1-216ENST00000548401 MIER1Q8N108 512 aa23.05■■□□□ 1.28
LETMD1-216ENST00000548401 CCER2I3L3R5 266 aa23.03■■□□□ 1.28
LETMD1-216ENST00000548401 PRKAR2BP31323 418 aa23.03■■□□□ 1.28
LETMD1-216ENST00000548401 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.03■■□□□ 1.28
LETMD1-216ENST00000548401 TOGARAM1Q9Y4F4 1720 aa23.02■■□□□ 1.28
LETMD1-216ENST00000548401 FCHSD2O94868 740 aa23.02■■□□□ 1.28
LETMD1-216ENST00000548401 PNISRQ8TF01 805 aaKnown RBP23.02■■□□□ 1.28
LETMD1-216ENST00000548401 WDR43Q15061 677 aaKnown RBP eCLIP23.01■■□□□ 1.27
LETMD1-216ENST00000548401 ZCRB1Q8TBF4 217 aaKnown RBP23.01■■□□□ 1.27
LETMD1-216ENST00000548401 DOT1LQ8TEK3 1739 aa23.01■■□□□ 1.27
LETMD1-216ENST00000548401 PCDH11XQ9BZA7 1347 aa23.01■■□□□ 1.27
LETMD1-216ENST00000548401 PCDH11YQ9BZA8 1340 aa23.01■■□□□ 1.27
LETMD1-216ENST00000548401 BCL9O00512 1426 aa23■■□□□ 1.27
LETMD1-216ENST00000548401 ADAMTS7Q9UKP4 1686 aa23■■□□□ 1.27
LETMD1-216ENST00000548401 KRT27Q7Z3Y8 459 aa23■■□□□ 1.27
LETMD1-216ENST00000548401 PLEKHF1Q96S99 279 aa23■■□□□ 1.27
LETMD1-216ENST00000548401 SBF2Q86WG5 1849 aa22.99■■□□□ 1.27
LETMD1-216ENST00000548401 EXOC5O00471 708 aa22.99■■□□□ 1.27
LETMD1-216ENST00000548401 ILDR2Q71H61 639 aa22.99■■□□□ 1.27
LETMD1-216ENST00000548401 MARCH10Q8NA82 808 aaPredicted RBP22.99■■□□□ 1.27
LETMD1-216ENST00000548401 ADAMTS8Q9UP79 889 aa22.99■■□□□ 1.27
LETMD1-216ENST00000548401 CYP27B1O15528 508 aa22.98■■□□□ 1.27
LETMD1-216ENST00000548401 NHSQ6T4R5 1651 aa22.97■■□□□ 1.27
LETMD1-216ENST00000548401 VIRMAQ69YN4 1812 aaKnown RBP22.97■■□□□ 1.27
LETMD1-216ENST00000548401 AMOTQ4VCS5 1084 aa22.97■■□□□ 1.27
LETMD1-216ENST00000548401 PHACTR3Q96KR7 559 aa22.97■■□□□ 1.27
LETMD1-216ENST00000548401 SPG7Q9UQ90 795 aa22.97■■□□□ 1.27
LETMD1-216ENST00000548401 DLG5Q8TDM6 1919 aa22.96■■□□□ 1.27
LETMD1-216ENST00000548401 PDE3BQ13370 1112 aa22.96■■□□□ 1.27
LETMD1-216ENST00000548401 PLEKHO1Q53GL0 409 aaPredicted RBP22.96■■□□□ 1.27
LETMD1-216ENST00000548401 KDM6AO15550 1401 aaPredicted RBP22.95■■□□□ 1.26
LETMD1-216ENST00000548401 MTHFSDQ2M296 383 aaKnown RBP22.95■■□□□ 1.26
LETMD1-216ENST00000548401 SCN11AQ9UI33 1791 aa22.95■■□□□ 1.26
LETMD1-216ENST00000548401 EP400Q96L91 3159 aa22.95■■□□□ 1.26
LETMD1-216ENST00000548401 TNS1Q9HBL0 1735 aaKnown RBP22.94■■□□□ 1.26
LETMD1-216ENST00000548401 PHKG2P15735 406 aa22.94■■□□□ 1.26
LETMD1-216ENST00000548401 FAM182BQ5T319 152 aa22.94■■□□□ 1.26
LETMD1-216ENST00000548401 ZNF530Q6P9A1 599 aaPredicted RBP22.94■■□□□ 1.26
LETMD1-216ENST00000548401 DDX54Q8TDD1 881 aaKnown RBP22.93■■□□□ 1.26
LETMD1-216ENST00000548401 MRC1P22897 1456 aa22.92■■□□□ 1.26
LETMD1-216ENST00000548401 MAP3K5Q99683 1374 aa22.91■■□□□ 1.26
LETMD1-216ENST00000548401 NKX1-1Q15270 411 aaPredicted RBP22.91■■□□□ 1.26
LETMD1-216ENST00000548401 CCDC146Q8IYE0 955 aa22.91■■□□□ 1.26
LETMD1-216ENST00000548401 GAS2L2Q8NHY3 880 aa22.91■■□□□ 1.26
LETMD1-216ENST00000548401 PNNQ9H307 717 aaKnown RBP22.91■■□□□ 1.26
LETMD1-216ENST00000548401 ITGB4P16144 1822 aa22.9■■□□□ 1.26
LETMD1-216ENST00000548401 IFNL2Q8IZJ0 200 aa22.9■■□□□ 1.26
LETMD1-216ENST00000548401 MAPK8IP3Q9UPT6 1336 aa22.89■■□□□ 1.26
LETMD1-216ENST00000548401 AKAP4Q5JQC9 854 aa22.89■■□□□ 1.25
LETMD1-216ENST00000548401 RUNDC1Q96C34 613 aa22.89■■□□□ 1.25
LETMD1-216ENST00000548401 SIPA1L3O60292 1781 aaPredicted RBP22.88■■□□□ 1.25
LETMD1-216ENST00000548401 C1orf141Q5JVX7 400 aa22.87■■□□□ 1.25
LETMD1-216ENST00000548401 FAM196AQ6ZSG2 479 aa22.87■■□□□ 1.25
LETMD1-216ENST00000548401 BTAF1O14981 1849 aa22.87■■□□□ 1.25
LETMD1-216ENST00000548401 NFE2L2Q16236 605 aa22.86■■□□□ 1.25
LETMD1-216ENST00000548401 FAM9BQ8IZU0 186 aa22.86■■□□□ 1.25
LETMD1-216ENST00000548401 NEFMP07197 916 aa22.85■■□□□ 1.25
LETMD1-216ENST00000548401 PAPPAQ13219 1627 aa22.84■■□□□ 1.25
LETMD1-216ENST00000548401 HSP90AB1P08238 724 aaKnown RBP22.84■■□□□ 1.25
LETMD1-216ENST00000548401 CEMIPQ8WUJ3 1361 aa22.84■■□□□ 1.25
LETMD1-216ENST00000548401 TMPOP42166 694 aaKnown RBP22.83■■□□□ 1.25
LETMD1-216ENST00000548401 DCAF5Q96JK2 942 aa22.83■■□□□ 1.25
LETMD1-216ENST00000548401 GNAT3A8MTJ3 354 aa22.82■■□□□ 1.24
LETMD1-216ENST00000548401 MPRIPQ6WCQ1 1025 aa22.82■■□□□ 1.24
LETMD1-216ENST00000548401 RGPD3A6NKT7 1758 aaPredicted RBP22.81■■□□□ 1.24
LETMD1-216ENST00000548401 RGPD4Q7Z3J3 1758 aa22.81■■□□□ 1.24
LETMD1-216ENST00000548401 APAF1O14727 1248 aa22.81■■□□□ 1.24
LETMD1-216ENST00000548401 ACSBG1Q96GR2 724 aa22.81■■□□□ 1.24
LETMD1-216ENST00000548401 RNMTO43148 476 aaKnown RBP22.8■■□□□ 1.24
LETMD1-216ENST00000548401 PTF1AQ7RTS3 328 aa22.8■■□□□ 1.24
LETMD1-216ENST00000548401 KCNQ2O43526 872 aa22.79■■□□□ 1.24
LETMD1-216ENST00000548401 IL17REQ8NFR9 667 aa22.79■■□□□ 1.24
LETMD1-216ENST00000548401 RRP7AQ9Y3A4 280 aaKnown RBP22.79■■□□□ 1.24
LETMD1-216ENST00000548401 HTATSF1O43719 755 aaKnown RBP22.78■■□□□ 1.24
LETMD1-216ENST00000548401 TRIM37O94972 964 aa22.78■■□□□ 1.24
LETMD1-216ENST00000548401 LGR6Q9HBX8 967 aa22.78■■□□□ 1.24
LETMD1-216ENST00000548401 ERVV-2B6SEH9 535 aa22.77■■□□□ 1.24
LETMD1-216ENST00000548401 PRIM1P49642 420 aaKnown RBP22.77■■□□□ 1.24
LETMD1-216ENST00000548401 BCL11BQ9C0K0 894 aaPredicted RBP22.77■■□□□ 1.24
LETMD1-216ENST00000548401 RIPK4P57078 832 aa22.76■■□□□ 1.23
LETMD1-216ENST00000548401 TRIM35Q9UPQ4 493 aa22.76■■□□□ 1.23
LETMD1-216ENST00000548401 KAT6BQ8WYB5 2073 aa22.76■■□□□ 1.23
LETMD1-216ENST00000548401 LY75O60449 1722 aa22.76■■□□□ 1.23
LETMD1-216ENST00000548401 DCTN1Q14203 1278 aa22.75■■□□□ 1.23
LETMD1-216ENST00000548401 MCM10Q7L590 875 aa22.75■■□□□ 1.23
LETMD1-216ENST00000548401 UBR2Q8IWV8 1755 aa22.75■■□□□ 1.23
LETMD1-216ENST00000548401 KDM3BQ7LBC6 1761 aa22.74■■□□□ 1.23
LETMD1-216ENST00000548401 SLC52A2Q9HAB3 445 aa22.74■■□□□ 1.23
LETMD1-216ENST00000548401 LMOD3Q0VAK6 560 aa22.73■■□□□ 1.23
LETMD1-216ENST00000548401 RTF1Q92541 710 aaKnown RBP22.73■■□□□ 1.23
LETMD1-216ENST00000548401 UPF1Q92900 1129 aaKnown RBP eCLIP22.73■■□□□ 1.23
LETMD1-216ENST00000548401 SYTL4Q96C24 671 aaPredicted RBP22.73■■□□□ 1.23
LETMD1-216ENST00000548401 THUMPD2Q9BTF0 503 aaKnown RBP22.73■■□□□ 1.23
LETMD1-216ENST00000548401 RREB1Q92766 1687 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms