RNA–Protein interactions for RNA: ENST00000548365.5

TGFBR1-205, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 3

Gene TGFBR1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-205ENST00000548365 NBPF20Q3BBV1 942 aa7.39□□□□□ -1.23
TGFBR1-205ENST00000548365 CCDC85AQ96PX6 553 aaPredicted RBP7.39□□□□□ -1.23
TGFBR1-205ENST00000548365 CEP126Q9P2H0 1117 aa7.39□□□□□ -1.23
TGFBR1-205ENST00000548365 APBB1O00213 710 aa7.38□□□□□ -1.23
TGFBR1-205ENST00000548365 SCTRP47872 440 aa7.38□□□□□ -1.23
TGFBR1-205ENST00000548365 C6orf118Q5T5N4 469 aa7.38□□□□□ -1.23
TGFBR1-205ENST00000548365 LINC00528Q8N1L1 170 aa7.38□□□□□ -1.23
TGFBR1-205ENST00000548365 PRXQ9BXM0 1461 aa7.37□□□□□ -1.23
TGFBR1-205ENST00000548365 SEPT12Q8IYM1 358 aa7.37□□□□□ -1.23
TGFBR1-205ENST00000548365 ADAMTS19Q8TE59 1207 aa7.37□□□□□ -1.23
TGFBR1-205ENST00000548365 CDCA7Q9BWT1 371 aaPredicted RBP7.37□□□□□ -1.23
TGFBR1-205ENST00000548365 SOS2Q07890 1332 aaPredicted RBP7.36□□□□□ -1.23
TGFBR1-205ENST00000548365 POM121CA8CG34 1229 aa7.36□□□□□ -1.23
TGFBR1-205ENST00000548365 DHX9Q08211 1270 aaKnown RBP7.36□□□□□ -1.23
TGFBR1-205ENST00000548365 SENP2Q9HC62 589 aa7.36□□□□□ -1.23
TGFBR1-205ENST00000548365 CYLDQ9NQC7 956 aa7.36□□□□□ -1.23
TGFBR1-205ENST00000548365 PGPEP1Q9NXJ5 209 aa7.36□□□□□ -1.23
TGFBR1-205ENST00000548365 CHIC2Q9UKJ5 165 aa7.36□□□□□ -1.23
TGFBR1-205ENST00000548365 RRBP1Q9P2E9 1410 aaKnown RBP7.35□□□□□ -1.23
TGFBR1-205ENST00000548365 FLIIQ13045 1269 aa7.35□□□□□ -1.23
TGFBR1-205ENST00000548365 FNBP4Q8N3X1 1017 aaPredicted RBP7.35□□□□□ -1.23
TGFBR1-205ENST00000548365 CLUAP1Q96AJ1 413 aa7.35□□□□□ -1.23
TGFBR1-205ENST00000548365 SPINT1O43278 529 aa7.34□□□□□ -1.23
TGFBR1-205ENST00000548365 BMP2P12643 396 aa7.34□□□□□ -1.23
TGFBR1-205ENST00000548365 ERVK-9P63128 1117 aa7.34□□□□□ -1.23
TGFBR1-205ENST00000548365 RELBQ01201 579 aa7.34□□□□□ -1.23
TGFBR1-205ENST00000548365 NFX1Q12986 1120 aaKnown RBP7.34□□□□□ -1.23
TGFBR1-205ENST00000548365 KIFC2Q96AC6 838 aa7.34□□□□□ -1.23
TGFBR1-205ENST00000548365 TSEN34Q9BSV6 310 aaKnown RBP7.34□□□□□ -1.23
TGFBR1-205ENST00000548365 DNMT3LQ9UJW3 386 aa7.34□□□□□ -1.23
TGFBR1-205ENST00000548365 PIK3CDO00329 1044 aa7.33□□□□□ -1.24
TGFBR1-205ENST00000548365 ADH1AP07327 375 aa7.33□□□□□ -1.24
TGFBR1-205ENST00000548365 CTSOP43234 321 aaPredicted RBP7.33□□□□□ -1.24
TGFBR1-205ENST00000548365 MCCD1P59942 119 aaPredicted RBP7.33□□□□□ -1.24
TGFBR1-205ENST00000548365 NEUROD1Q13562 356 aa7.33□□□□□ -1.24
TGFBR1-205ENST00000548365 OSBPL3Q9H4L5 887 aa7.33□□□□□ -1.24
TGFBR1-205ENST00000548365 ALG2Q9H553 416 aa7.33□□□□□ -1.24
TGFBR1-205ENST00000548365 ZNF395Q9H8N7 513 aaPredicted RBP7.33□□□□□ -1.24
TGFBR1-205ENST00000548365 PCDHB11Q9Y5F2 797 aa7.33□□□□□ -1.24
TGFBR1-205ENST00000548365 NCAPD3P42695 1498 aa7.32□□□□□ -1.24
TGFBR1-205ENST00000548365 TRAK2O60296 914 aa7.32□□□□□ -1.24
TGFBR1-205ENST00000548365 SCARF1Q14162 830 aa7.32□□□□□ -1.24
TGFBR1-205ENST00000548365 INSM2Q96T92 566 aaPredicted RBP7.32□□□□□ -1.24
TGFBR1-205ENST00000548365 RUSC2Q8N2Y8 1516 aa7.32□□□□□ -1.24
TGFBR1-205ENST00000548365 UBTFP17480 764 aaKnown RBP7.31□□□□□ -1.24
TGFBR1-205ENST00000548365 PTGIRP43119 386 aa7.31□□□□□ -1.24
TGFBR1-205ENST00000548365 EIF4G2P78344 907 aaKnown RBP eCLIP7.31□□□□□ -1.24
TGFBR1-205ENST00000548365 WASHC4Q2M389 1173 aa7.31□□□□□ -1.24
TGFBR1-205ENST00000548365 PRM3Q9NNZ6 103 aa7.31□□□□□ -1.24
TGFBR1-205ENST00000548365 RAPGEF2Q9Y4G8 1499 aa7.3□□□□□ -1.24
TGFBR1-205ENST00000548365 STAU1O95793 577 aaKnown RBP7.3□□□□□ -1.24
TGFBR1-205ENST00000548365 VEGFBP49765 207 aa7.3□□□□□ -1.24
TGFBR1-205ENST00000548365 FOXD4L5Q5VV16 416 aaPredicted RBP7.3□□□□□ -1.24
TGFBR1-205ENST00000548365 ZNF330Q9Y3S2 320 aaPredicted RBP7.3□□□□□ -1.24
TGFBR1-205ENST00000548365 FIGNL2A6NMB9 653 aa7.29□□□□□ -1.24
TGFBR1-205ENST00000548365 CC2D2BQ6DHV5 1058 aa7.29□□□□□ -1.24
TGFBR1-205ENST00000548365 TREML4Q6UXN2 200 aa7.29□□□□□ -1.24
TGFBR1-205ENST00000548365 GTF3C3Q9Y5Q9 886 aa7.29□□□□□ -1.24
TGFBR1-205ENST00000548365 KIF27Q86VH2 1401 aa7.28□□□□□ -1.24
TGFBR1-205ENST00000548365 TTLL8A6PVC2 850 aa7.28□□□□□ -1.24
TGFBR1-205ENST00000548365 TERTO14746 1132 aaKnown RBP7.28□□□□□ -1.24
TGFBR1-205ENST00000548365 RNF20Q5VTR2 975 aa7.28□□□□□ -1.24
TGFBR1-205ENST00000548365 RNF217Q8TC41 542 aa7.28□□□□□ -1.24
TGFBR1-205ENST00000548365 UCN2Q96RP3 112 aa7.28□□□□□ -1.24
TGFBR1-205ENST00000548365 ARAP1Q96P48 1450 aa7.28□□□□□ -1.24
TGFBR1-205ENST00000548365 A0A1W2PRU2 124 aa7.27□□□□□ -1.25
TGFBR1-205ENST00000548365 RNF135Q8IUD6 432 aa7.27□□□□□ -1.25
TGFBR1-205ENST00000548365 HRH3Q9Y5N1 445 aa7.27□□□□□ -1.25
TGFBR1-205ENST00000548365 CFTRP13569 1480 aa7.27□□□□□ -1.25
TGFBR1-205ENST00000548365 CFAP43Q8NDM7 1665 aa7.27□□□□□ -1.25
TGFBR1-205ENST00000548365 ERBB4Q15303 1308 aa7.27□□□□□ -1.25
TGFBR1-205ENST00000548365 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.26□□□□□ -1.25
TGFBR1-205ENST00000548365 SENP3-EIF4A1A0A087X0R7 540 aa7.26□□□□□ -1.25
TGFBR1-205ENST00000548365 UPP2O95045 317 aa7.26□□□□□ -1.25
TGFBR1-205ENST00000548365 CCDC125Q86Z20 511 aa7.26□□□□□ -1.25
TGFBR1-205ENST00000548365 NXF1Q9UBU9 619 aaKnown RBP7.26□□□□□ -1.25
TGFBR1-205ENST00000548365 TIMELESSQ9UNS1 1208 aa7.26□□□□□ -1.25
TGFBR1-205ENST00000548365 DHX57Q6P158 1386 aaKnown RBP7.25□□□□□ -1.25
TGFBR1-205ENST00000548365 A6NJR5 290 aa7.25□□□□□ -1.25
TGFBR1-205ENST00000548365 ATP5J2-PTCD1G3V325 749 aa7.25□□□□□ -1.25
TGFBR1-205ENST00000548365 RAD21O60216 631 aa7.25□□□□□ -1.25
TGFBR1-205ENST00000548365 MAN1A2O60476 641 aa7.25□□□□□ -1.25
TGFBR1-205ENST00000548365 IL2RAP01589 272 aa7.25□□□□□ -1.25
TGFBR1-205ENST00000548365 SEMA3FQ13275 785 aa7.25□□□□□ -1.25
TGFBR1-205ENST00000548365 SLFNL1Q499Z3 407 aa7.25□□□□□ -1.25
TGFBR1-205ENST00000548365 PROSER2Q86WR7 435 aaPredicted RBP7.25□□□□□ -1.25
TGFBR1-205ENST00000548365 PLPP7Q8NBV4 271 aa7.25□□□□□ -1.25
TGFBR1-205ENST00000548365 EFCAB5A4FU69 1503 aa7.24□□□□□ -1.25
TGFBR1-205ENST00000548365 H3BM21 787 aa7.24□□□□□ -1.25
TGFBR1-205ENST00000548365 WFS1O76024 890 aa7.24□□□□□ -1.25
TGFBR1-205ENST00000548365 SOX11P35716 441 aa7.24□□□□□ -1.25
TGFBR1-205ENST00000548365 RNF144AP50876 292 aaPredicted RBP7.24□□□□□ -1.25
TGFBR1-205ENST00000548365 PTSQ03393 145 aa7.24□□□□□ -1.25
TGFBR1-205ENST00000548365 HDGFL1Q5TGJ6 251 aa7.24□□□□□ -1.25
TGFBR1-205ENST00000548365 ZNF592Q92610 1267 aa7.24□□□□□ -1.25
TGFBR1-205ENST00000548365 RAB6BQ9NRW1 208 aa7.24□□□□□ -1.25
TGFBR1-205ENST00000548365 DOLKQ9UPQ8 538 aa7.24□□□□□ -1.25
TGFBR1-205ENST00000548365 TIAM1Q13009 1591 aa7.24□□□□□ -1.25
TGFBR1-205ENST00000548365 TTBK1Q5TCY1 1321 aaPredicted RBP7.24□□□□□ -1.25
TGFBR1-205ENST00000548365 PPFIA3O75145 1194 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms