RNA–Protein interactions for RNA: ENST00000548092.5

TRAFD1-204, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-204ENST00000548092 Q6ZVU0 165 aa7.73□□□□□ -1.17
TRAFD1-204ENST00000548092 SNRKQ9NRH2 765 aa7.73□□□□□ -1.17
TRAFD1-204ENST00000548092 CDV3Q9UKY7 258 aaKnown RBP7.73□□□□□ -1.17
TRAFD1-204ENST00000548092 WDR97A6NE52 1622 aa7.73□□□□□ -1.17
TRAFD1-204ENST00000548092 SOS2Q07890 1332 aaPredicted RBP7.73□□□□□ -1.17
TRAFD1-204ENST00000548092 TDRD9Q8NDG6 1382 aaKnown RBP7.72□□□□□ -1.17
TRAFD1-204ENST00000548092 WIPF1O43516 503 aa7.72□□□□□ -1.17
TRAFD1-204ENST00000548092 GPR37L1O60883 481 aa7.72□□□□□ -1.17
TRAFD1-204ENST00000548092 RAB15P59190 212 aa7.72□□□□□ -1.17
TRAFD1-204ENST00000548092 DZIP3Q86Y13 1208 aaKnown RBP7.72□□□□□ -1.17
TRAFD1-204ENST00000548092 AGBL1Q96MI9 1066 aa7.72□□□□□ -1.17
TRAFD1-204ENST00000548092 DNMT3LQ9UJW3 386 aa7.72□□□□□ -1.17
TRAFD1-204ENST00000548092 TSPOAP1O95153 1857 aa7.72□□□□□ -1.17
TRAFD1-204ENST00000548092 ERBB4Q15303 1308 aa7.72□□□□□ -1.17
TRAFD1-204ENST00000548092 CEP170Q5SW79 1584 aa7.71□□□□□ -1.17
TRAFD1-204ENST00000548092 WIZO95785 1651 aa7.71□□□□□ -1.18
TRAFD1-204ENST00000548092 H3BM21 787 aa7.71□□□□□ -1.18
TRAFD1-204ENST00000548092 FBXO45P0C2W1 286 aa7.71□□□□□ -1.18
TRAFD1-204ENST00000548092 MTMR14Q8NCE2 650 aa7.71□□□□□ -1.18
TRAFD1-204ENST00000548092 PNMA1Q8ND90 353 aa7.71□□□□□ -1.18
TRAFD1-204ENST00000548092 BANK1Q8NDB2 785 aa7.71□□□□□ -1.18
TRAFD1-204ENST00000548092 TSEN34Q9BSV6 310 aaKnown RBP7.71□□□□□ -1.18
TRAFD1-204ENST00000548092 PGPEP1Q9NXJ5 209 aa7.71□□□□□ -1.18
TRAFD1-204ENST00000548092 ZBBXA8MT70 800 aa7.7□□□□□ -1.18
TRAFD1-204ENST00000548092 ESPNB1AK53 854 aa7.7□□□□□ -1.18
TRAFD1-204ENST00000548092 ERVH48-1M5A8F1 160 aa7.7□□□□□ -1.18
TRAFD1-204ENST00000548092 MAN1A2O60476 641 aa7.7□□□□□ -1.18
TRAFD1-204ENST00000548092 UPP2O95045 317 aa7.7□□□□□ -1.18
TRAFD1-204ENST00000548092 ADD1P35611 737 aaKnown RBP7.7□□□□□ -1.18
TRAFD1-204ENST00000548092 SLC16A10Q8TF71 515 aa7.7□□□□□ -1.18
TRAFD1-204ENST00000548092 TOP2BQ02880 1626 aa7.7□□□□□ -1.18
TRAFD1-204ENST00000548092 GRIN2BQ13224 1484 aa7.69□□□□□ -1.18
TRAFD1-204ENST00000548092 RAD54L2Q9Y4B4 1467 aa7.69□□□□□ -1.18
TRAFD1-204ENST00000548092 FIGNL2A6NMB9 653 aa7.69□□□□□ -1.18
TRAFD1-204ENST00000548092 LILRA1O75019 489 aa7.69□□□□□ -1.18
TRAFD1-204ENST00000548092 GMPRP36959 345 aa7.69□□□□□ -1.18
TRAFD1-204ENST00000548092 DHX9Q08211 1270 aaKnown RBP7.69□□□□□ -1.18
TRAFD1-204ENST00000548092 NPAS3Q8IXF0 933 aa7.69□□□□□ -1.18
TRAFD1-204ENST00000548092 KDF1Q8NAX2 398 aaPredicted RBP7.69□□□□□ -1.18
TRAFD1-204ENST00000548092 ZNF784Q8NCA9 323 aaPredicted RBP7.69□□□□□ -1.18
TRAFD1-204ENST00000548092 SPINT1O43278 529 aa7.68□□□□□ -1.18
TRAFD1-204ENST00000548092 GIGYF1O75420 1035 aaPredicted RBP7.68□□□□□ -1.18
TRAFD1-204ENST00000548092 NBPF20Q3BBV1 942 aa7.68□□□□□ -1.18
TRAFD1-204ENST00000548092 SHROOM2Q13796 1616 aa7.67□□□□□ -1.18
TRAFD1-204ENST00000548092 TTLL8A6PVC2 850 aa7.67□□□□□ -1.18
TRAFD1-204ENST00000548092 RELBQ01201 579 aa7.67□□□□□ -1.18
TRAFD1-204ENST00000548092 ZNF395Q9H8N7 513 aaPredicted RBP7.67□□□□□ -1.18
TRAFD1-204ENST00000548092 PCDHB9Q9Y5E1 797 aa7.67□□□□□ -1.18
TRAFD1-204ENST00000548092 PPFIA3O75145 1194 aa7.66□□□□□ -1.18
TRAFD1-204ENST00000548092 LORP23490 312 aaPredicted RBP7.66□□□□□ -1.18
TRAFD1-204ENST00000548092 CTSOP43234 321 aaPredicted RBP7.66□□□□□ -1.18
TRAFD1-204ENST00000548092 IRF7Q92985 503 aa7.66□□□□□ -1.18
TRAFD1-204ENST00000548092 PPRC1Q5VV67 1664 aaKnown RBP7.65□□□□□ -1.18
TRAFD1-204ENST00000548092 INSM2Q96T92 566 aaPredicted RBP7.65□□□□□ -1.18
TRAFD1-204ENST00000548092 PCF11O94913 1555 aaKnown RBP7.64□□□□□ -1.19
TRAFD1-204ENST00000548092 COL17A1Q9UMD9 1497 aaPredicted RBP7.64□□□□□ -1.19
TRAFD1-204ENST00000548092 NR1H3Q13133 447 aa7.64□□□□□ -1.19
TRAFD1-204ENST00000548092 CYLDQ9NQC7 956 aa7.64□□□□□ -1.19
TRAFD1-204ENST00000548092 SRCAPQ6ZRS2 3230 aa7.64□□□□□ -1.19
TRAFD1-204ENST00000548092 SOGA1O94964 1423 aa7.63□□□□□ -1.19
TRAFD1-204ENST00000548092 PTSQ03393 145 aa7.63□□□□□ -1.19
TRAFD1-204ENST00000548092 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.63□□□□□ -1.19
TRAFD1-204ENST00000548092 NDUFB9Q9Y6M9 179 aa7.63□□□□□ -1.19
TRAFD1-204ENST00000548092 NUP160Q12769 1436 aa7.62□□□□□ -1.19
TRAFD1-204ENST00000548092 ADH1AP07327 375 aa7.62□□□□□ -1.19
TRAFD1-204ENST00000548092 PTGIRP43119 386 aa7.62□□□□□ -1.19
TRAFD1-204ENST00000548092 INSM1Q01101 510 aaPredicted RBP7.62□□□□□ -1.19
TRAFD1-204ENST00000548092 SEPT12Q8IYM1 358 aa7.62□□□□□ -1.19
TRAFD1-204ENST00000548092 TBC1D2BQ9UPU7 963 aa7.62□□□□□ -1.19
TRAFD1-204ENST00000548092 ADCY10Q96PN6 1610 aa7.61□□□□□ -1.19
TRAFD1-204ENST00000548092 VSIG8P0DPA2 414 aa7.61□□□□□ -1.19
TRAFD1-204ENST00000548092 GPR161Q8N6U8 529 aaKnown RBP7.61□□□□□ -1.19
TRAFD1-204ENST00000548092 FOXD4L5Q5VV16 416 aaPredicted RBP7.6□□□□□ -1.19
TRAFD1-204ENST00000548092 POLMQ9NP87 494 aaPredicted RBP7.6□□□□□ -1.19
TRAFD1-204ENST00000548092 TOP2AP11388 1531 aaKnown RBP7.6□□□□□ -1.19
TRAFD1-204ENST00000548092 GRIN2AQ12879 1464 aa7.6□□□□□ -1.19
TRAFD1-204ENST00000548092 PBRM1Q86U86 1689 aa7.6□□□□□ -1.19
TRAFD1-204ENST00000548092 SLC35F4A4IF30 521 aa7.59□□□□□ -1.19
TRAFD1-204ENST00000548092 SCTRP47872 440 aa7.59□□□□□ -1.19
TRAFD1-204ENST00000548092 IRF5Q13568 498 aa7.59□□□□□ -1.19
TRAFD1-204ENST00000548092 RNF217Q8TC41 542 aa7.59□□□□□ -1.19
TRAFD1-204ENST00000548092 CCDC155Q8N6L0 562 aa7.58□□□□□ -1.2
TRAFD1-204ENST00000548092 STK17AQ9UEE5 414 aa7.58□□□□□ -1.2
TRAFD1-204ENST00000548092 PTPRMP28827 1452 aa7.57□□□□□ -1.2
TRAFD1-204ENST00000548092 SENP3-EIF4A1A0A087X0R7 540 aa7.57□□□□□ -1.2
TRAFD1-204ENST00000548092 ERVK-9P63128 1117 aa7.57□□□□□ -1.2
TRAFD1-204ENST00000548092 TSGA10IPQ3SY00 556 aa7.57□□□□□ -1.2
TRAFD1-204ENST00000548092 FGD5Q6ZNL6 1462 aa7.56□□□□□ -1.2
TRAFD1-204ENST00000548092 GLI2P10070 1586 aa7.56□□□□□ -1.2
TRAFD1-204ENST00000548092 PRG4Q92954 1404 aaPredicted RBP7.56□□□□□ -1.2
TRAFD1-204ENST00000548092 MCCD1P59942 119 aaPredicted RBP7.56□□□□□ -1.2
TRAFD1-204ENST00000548092 CC2D2BQ6DHV5 1058 aa7.56□□□□□ -1.2
TRAFD1-204ENST00000548092 CDCA7Q9BWT1 371 aaPredicted RBP7.56□□□□□ -1.2
TRAFD1-204ENST00000548092 CEP126Q9P2H0 1117 aa7.56□□□□□ -1.2
TRAFD1-204ENST00000548092 A0A1W2PRU2 124 aa7.55□□□□□ -1.2
TRAFD1-204ENST00000548092 ATP5J2-PTCD1G3V325 749 aa7.55□□□□□ -1.2
TRAFD1-204ENST00000548092 KRT76Q01546 638 aa7.55□□□□□ -1.2
TRAFD1-204ENST00000548092 RNF20Q5VTR2 975 aa7.55□□□□□ -1.2
TRAFD1-204ENST00000548092 ZSCAN1Q8NBB4 408 aa7.55□□□□□ -1.2
TRAFD1-204ENST00000548092 CCDC85AQ96PX6 553 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms