RNA–Protein interactions for RNA: ENST00000547752.5

PTPRR-206, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,729 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-206ENST00000547752 NUDCQ9Y266 331 aa12.9□□□□□ -0.34
PTPRR-206ENST00000547752 RGS12O14924 1447 aa12.9□□□□□ -0.35
PTPRR-206ENST00000547752 WNK3Q9BYP7 1800 aa12.89□□□□□ -0.35
PTPRR-206ENST00000547752 U2AF1L5P0DN76 240 aaPredicted RBP12.88□□□□□ -0.35
PTPRR-206ENST00000547752 U2AF1Q01081 240 aaKnown RBP eCLIP12.88□□□□□ -0.35
PTPRR-206ENST00000547752 CDCA7Q9BWT1 371 aaPredicted RBP12.88□□□□□ -0.35
PTPRR-206ENST00000547752 RSPH6AQ9H0K4 717 aa12.88□□□□□ -0.35
PTPRR-206ENST00000547752 MRS2Q9HD23 443 aa12.88□□□□□ -0.35
PTPRR-206ENST00000547752 OVOS2A0A0G2JMS6 1433 aa12.88□□□□□ -0.35
PTPRR-206ENST00000547752 TATP17735 454 aaPredicted RBP12.88□□□□□ -0.35
PTPRR-206ENST00000547752 DSG3P32926 999 aa12.88□□□□□ -0.35
PTPRR-206ENST00000547752 PNISRQ8TF01 805 aaKnown RBP12.87□□□□□ -0.35
PTPRR-206ENST00000547752 RAPGEF4Q8WZA2 1011 aa12.87□□□□□ -0.35
PTPRR-206ENST00000547752 CCER2I3L3R5 266 aa12.86□□□□□ -0.35
PTPRR-206ENST00000547752 PARP4Q9UKK3 1724 aaKnown RBP12.86□□□□□ -0.35
PTPRR-206ENST00000547752 LRRC37A3O60309 1634 aa12.86□□□□□ -0.35
PTPRR-206ENST00000547752 A0A0G2JS52 829 aa12.85□□□□□ -0.35
PTPRR-206ENST00000547752 FCHSD2O94868 740 aa12.85□□□□□ -0.35
PTPRR-206ENST00000547752 MYT1Q01538 1121 aa12.85□□□□□ -0.35
PTPRR-206ENST00000547752 ADAMTS8Q9UP79 889 aa12.85□□□□□ -0.35
PTPRR-206ENST00000547752 EXOC5O00471 708 aa12.85□□□□□ -0.35
PTPRR-206ENST00000547752 PRKAR2BP31323 418 aa12.85□□□□□ -0.35
PTPRR-206ENST00000547752 DDB1Q16531 1140 aa12.85□□□□□ -0.35
PTPRR-206ENST00000547752 ZCRB1Q8TBF4 217 aaKnown RBP12.85□□□□□ -0.35
PTPRR-206ENST00000547752 PHACTR3Q96KR7 559 aa12.85□□□□□ -0.35
PTPRR-206ENST00000547752 PLEKHF1Q96S99 279 aa12.85□□□□□ -0.35
PTPRR-206ENST00000547752 TNS2Q63HR2 1409 aa12.84□□□□□ -0.35
PTPRR-206ENST00000547752 ILDR2Q71H61 639 aa12.84□□□□□ -0.35
PTPRR-206ENST00000547752 MARCH10Q8NA82 808 aaPredicted RBP12.84□□□□□ -0.35
PTPRR-206ENST00000547752 BRWD3Q6RI45 1802 aa12.84□□□□□ -0.35
PTPRR-206ENST00000547752 WDR43Q15061 677 aaKnown RBP eCLIP12.83□□□□□ -0.36
PTPRR-206ENST00000547752 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.36
PTPRR-206ENST00000547752 PLEKHG2Q9H7P9 1386 aa12.83□□□□□ -0.36
PTPRR-206ENST00000547752 SHANK3Q9BYB0 1731 aa12.83□□□□□ -0.36
PTPRR-206ENST00000547752 CYP27B1O15528 508 aa12.82□□□□□ -0.36
PTPRR-206ENST00000547752 PLEKHO1Q53GL0 409 aaPredicted RBP12.82□□□□□ -0.36
PTPRR-206ENST00000547752 KRT27Q7Z3Y8 459 aa12.82□□□□□ -0.36
PTPRR-206ENST00000547752 PKD1L3Q7Z443 1732 aa12.82□□□□□ -0.36
PTPRR-206ENST00000547752 PDE3BQ13370 1112 aa12.82□□□□□ -0.36
PTPRR-206ENST00000547752 MTHFSDQ2M296 383 aaKnown RBP12.82□□□□□ -0.36
PTPRR-206ENST00000547752 FAM182BQ5T319 152 aa12.82□□□□□ -0.36
PTPRR-206ENST00000547752 SPG7Q9UQ90 795 aa12.82□□□□□ -0.36
PTPRR-206ENST00000547752 AMOTQ4VCS5 1084 aa12.81□□□□□ -0.36
PTPRR-206ENST00000547752 DDX54Q8TDD1 881 aaKnown RBP12.81□□□□□ -0.36
PTPRR-206ENST00000547752 CCDC146Q8IYE0 955 aa12.8□□□□□ -0.36
PTPRR-206ENST00000547752 PCDH11XQ9BZA7 1347 aa12.8□□□□□ -0.36
PTPRR-206ENST00000547752 PCDH11YQ9BZA8 1340 aa12.8□□□□□ -0.36
PTPRR-206ENST00000547752 PHKG2P15735 406 aa12.79□□□□□ -0.36
PTPRR-206ENST00000547752 ZNF530Q6P9A1 599 aaPredicted RBP12.79□□□□□ -0.36
PTPRR-206ENST00000547752 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
PTPRR-206ENST00000547752 FAM9BQ8IZU0 186 aa12.79□□□□□ -0.36
PTPRR-206ENST00000547752 NKX1-1Q15270 411 aaPredicted RBP12.78□□□□□ -0.36
PTPRR-206ENST00000547752 IFNL2Q8IZJ0 200 aa12.78□□□□□ -0.36
PTPRR-206ENST00000547752 RUNDC1Q96C34 613 aa12.78□□□□□ -0.36
PTPRR-206ENST00000547752 PNNQ9H307 717 aaKnown RBP12.78□□□□□ -0.36
PTPRR-206ENST00000547752 BCL9O00512 1426 aa12.77□□□□□ -0.37
PTPRR-206ENST00000547752 AKAP4Q5JQC9 854 aa12.76□□□□□ -0.37
PTPRR-206ENST00000547752 GAS2L2Q8NHY3 880 aa12.76□□□□□ -0.37
PTPRR-206ENST00000547752 NFE2L2Q16236 605 aa12.76□□□□□ -0.37
PTPRR-206ENST00000547752 MAPK8IP3Q9UPT6 1336 aa12.75□□□□□ -0.37
PTPRR-206ENST00000547752 KDM6AO15550 1401 aaPredicted RBP12.75□□□□□ -0.37
PTPRR-206ENST00000547752 TMPOP42166 694 aaKnown RBP12.75□□□□□ -0.37
PTPRR-206ENST00000547752 MPRIPQ6WCQ1 1025 aa12.75□□□□□ -0.37
PTPRR-206ENST00000547752 FAM196AQ6ZSG2 479 aa12.75□□□□□ -0.37
PTPRR-206ENST00000547752 PTF1AQ7RTS3 328 aa12.75□□□□□ -0.37
PTPRR-206ENST00000547752 APAF1O14727 1248 aa12.74□□□□□ -0.37
PTPRR-206ENST00000547752 C1orf141Q5JVX7 400 aa12.74□□□□□ -0.37
PTPRR-206ENST00000547752 ACSBG1Q96GR2 724 aa12.74□□□□□ -0.37
PTPRR-206ENST00000547752 LGR6Q9HBX8 967 aa12.74□□□□□ -0.37
PTPRR-206ENST00000547752 RRP7AQ9Y3A4 280 aaKnown RBP12.74□□□□□ -0.37
PTPRR-206ENST00000547752 MAP3K5Q99683 1374 aa12.74□□□□□ -0.37
PTPRR-206ENST00000547752 SENP3-EIF4A1A0A087X0R7 540 aa12.74□□□□□ -0.37
PTPRR-206ENST00000547752 RNMTO43148 476 aaKnown RBP12.74□□□□□ -0.37
PTPRR-206ENST00000547752 KCNQ2O43526 872 aa12.74□□□□□ -0.37
PTPRR-206ENST00000547752 IL17REQ8NFR9 667 aa12.74□□□□□ -0.37
PTPRR-206ENST00000547752 TOGARAM1Q9Y4F4 1720 aa12.73□□□□□ -0.37
PTPRR-206ENST00000547752 GNAT3A8MTJ3 354 aa12.73□□□□□ -0.37
PTPRR-206ENST00000547752 NEFMP07197 916 aa12.73□□□□□ -0.37
PTPRR-206ENST00000547752 HSP90AB1P08238 724 aaKnown RBP12.73□□□□□ -0.37
PTPRR-206ENST00000547752 DCAF5Q96JK2 942 aa12.73□□□□□ -0.37
PTPRR-206ENST00000547752 ADAMTS7Q9UKP4 1686 aa12.72□□□□□ -0.37
PTPRR-206ENST00000547752 PRIM1P49642 420 aaKnown RBP12.72□□□□□ -0.37
PTPRR-206ENST00000547752 RIPK4P57078 832 aa12.72□□□□□ -0.37
PTPRR-206ENST00000547752 DCTN1Q14203 1278 aa12.72□□□□□ -0.37
PTPRR-206ENST00000547752 HTATSF1O43719 755 aaKnown RBP12.71□□□□□ -0.37
PTPRR-206ENST00000547752 TRIM37O94972 964 aa12.71□□□□□ -0.37
PTPRR-206ENST00000547752 TRIM35Q9UPQ4 493 aa12.71□□□□□ -0.37
PTPRR-206ENST00000547752 SBF2Q86WG5 1849 aa12.71□□□□□ -0.38
PTPRR-206ENST00000547752 NEUROD2Q15784 382 aa12.71□□□□□ -0.38
PTPRR-206ENST00000547752 MCM10Q7L590 875 aa12.71□□□□□ -0.38
PTPRR-206ENST00000547752 DOT1LQ8TEK3 1739 aa12.7□□□□□ -0.38
PTPRR-206ENST00000547752 CEMIPQ8WUJ3 1361 aa12.7□□□□□ -0.38
PTPRR-206ENST00000547752 DLG5Q8TDM6 1919 aa12.7□□□□□ -0.38
PTPRR-206ENST00000547752 ERVV-2B6SEH9 535 aa12.7□□□□□ -0.38
PTPRR-206ENST00000547752 THUMPD2Q9BTF0 503 aaKnown RBP12.7□□□□□ -0.38
PTPRR-206ENST00000547752 BCL11BQ9C0K0 894 aaPredicted RBP12.7□□□□□ -0.38
PTPRR-206ENST00000547752 SCN11AQ9UI33 1791 aa12.69□□□□□ -0.38
PTPRR-206ENST00000547752 NHSQ6T4R5 1651 aa12.69□□□□□ -0.38
PTPRR-206ENST00000547752 PIGBQ92521 554 aa12.69□□□□□ -0.38
PTPRR-206ENST00000547752 RTF1Q92541 710 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms