RNA–Protein interactions for RNA: ENST00000546822.1

TFCP2-202, Transcript of transcription factor CP2, humanhuman

TSL 3

Gene TFCP2, Length 794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2-202ENST00000546822 LNPKQ9C0E8 428 aa11.09□□□□□ -0.63
TFCP2-202ENST00000546822 C19orf44Q9H6X5 657 aa11.09□□□□□ -0.63
TFCP2-202ENST00000546822 GDPD2Q9HCC8 539 aa11.09□□□□□ -0.63
TFCP2-202ENST00000546822 SH3BP5O60239 455 aa11.08□□□□□ -0.64
TFCP2-202ENST00000546822 SLC34A2O95436 690 aa11.08□□□□□ -0.64
TFCP2-202ENST00000546822 PDE4AP27815 886 aa11.08□□□□□ -0.64
TFCP2-202ENST00000546822 CLEC4GQ6UXB4 293 aa11.08□□□□□ -0.64
TFCP2-202ENST00000546822 DDX17Q92841 729 aaKnown RBP11.08□□□□□ -0.64
TFCP2-202ENST00000546822 SPOCK3Q9BQ16 436 aa11.08□□□□□ -0.64
TFCP2-202ENST00000546822 BRINP2Q9C0B6 783 aa11.08□□□□□ -0.64
TFCP2-202ENST00000546822 IBSPP21815 317 aaPredicted RBP11.07□□□□□ -0.64
TFCP2-202ENST00000546822 SDE2Q6IQ49 451 aa11.07□□□□□ -0.64
TFCP2-202ENST00000546822 GJD4Q96KN9 370 aaPredicted RBP11.07□□□□□ -0.64
TFCP2-202ENST00000546822 MFRPQ9BY79 579 aa11.07□□□□□ -0.64
TFCP2-202ENST00000546822 RPS6KL1Q9Y6S9 549 aa11.07□□□□□ -0.64
TFCP2-202ENST00000546822 GPATCH8Q9UKJ3 1502 aaKnown RBP11.07□□□□□ -0.64
TFCP2-202ENST00000546822 RTEL1-TNFRSF6BF6WH68 1400 aa11.07□□□□□ -0.64
TFCP2-202ENST00000546822 PPP1R37O75864 691 aa11.06□□□□□ -0.64
TFCP2-202ENST00000546822 MARSP56192 900 aaKnown RBP11.06□□□□□ -0.64
TFCP2-202ENST00000546822 PDAP1Q13442 181 aaKnown RBP11.06□□□□□ -0.64
TFCP2-202ENST00000546822 CHPF2Q9P2E5 772 aa11.06□□□□□ -0.64
TFCP2-202ENST00000546822 NCOA3Q9Y6Q9 1424 aa11.06□□□□□ -0.64
TFCP2-202ENST00000546822 UTRNP46939 3433 aa11.06□□□□□ -0.64
TFCP2-202ENST00000546822 U2SURPO15042 1029 aaKnown RBP11.05□□□□□ -0.64
TFCP2-202ENST00000546822 BAG6P46379 1132 aa11.05□□□□□ -0.64
TFCP2-202ENST00000546822 FMN1Q68DA7 1419 aa11.05□□□□□ -0.64
TFCP2-202ENST00000546822 ZNF467Q7Z7K2 595 aaPredicted RBP11.05□□□□□ -0.64
TFCP2-202ENST00000546822 CFDP1Q9UEE9 299 aaPredicted RBP11.05□□□□□ -0.64
TFCP2-202ENST00000546822 APLP1P51693 650 aa11.04□□□□□ -0.64
TFCP2-202ENST00000546822 EN1Q05925 392 aaPredicted RBP11.04□□□□□ -0.64
TFCP2-202ENST00000546822 MYBPC2Q14324 1141 aa11.04□□□□□ -0.64
TFCP2-202ENST00000546822 FAM212AQ96EL1 285 aa11.04□□□□□ -0.64
TFCP2-202ENST00000546822 PLEKHH2Q8IVE3 1493 aa11.04□□□□□ -0.64
TFCP2-202ENST00000546822 ZNF644Q9H582 1327 aaPredicted RBP11.04□□□□□ -0.64
TFCP2-202ENST00000546822 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.04□□□□□ -0.64
TFCP2-202ENST00000546822 EXOC5O00471 708 aa11.03□□□□□ -0.64
TFCP2-202ENST00000546822 SOX12O15370 315 aa11.03□□□□□ -0.64
TFCP2-202ENST00000546822 ATG7O95352 703 aa11.03□□□□□ -0.64
TFCP2-202ENST00000546822 LIG1P18858 919 aa11.03□□□□□ -0.64
TFCP2-202ENST00000546822 WDR78Q5VTH9 848 aa11.03□□□□□ -0.64
TFCP2-202ENST00000546822 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.03□□□□□ -0.64
TFCP2-202ENST00000546822 PNMA2Q9UL42 364 aa11.03□□□□□ -0.64
TFCP2-202ENST00000546822 NOP58Q9Y2X3 529 aaKnown RBP11.03□□□□□ -0.64
TFCP2-202ENST00000546822 ASXL1Q8IXJ9 1541 aa11.03□□□□□ -0.64
TFCP2-202ENST00000546822 MROH1Q8NDA8 1641 aa11.02□□□□□ -0.64
TFCP2-202ENST00000546822 ARHGAP35Q9NRY4 1499 aa11.02□□□□□ -0.65
TFCP2-202ENST00000546822 LRRIQ1Q96JM4 1722 aa11.02□□□□□ -0.65
TFCP2-202ENST00000546822 RECKO95980 971 aa11.02□□□□□ -0.65
TFCP2-202ENST00000546822 PAX3P23760 479 aa11.02□□□□□ -0.65
TFCP2-202ENST00000546822 ERCC5P28715 1186 aaPredicted RBP11.02□□□□□ -0.65
TFCP2-202ENST00000546822 HDGFL1Q5TGJ6 251 aa11.02□□□□□ -0.65
TFCP2-202ENST00000546822 TSHZ1Q6ZSZ6 1077 aa11.02□□□□□ -0.65
TFCP2-202ENST00000546822 SECISBP2LQ93073 1101 aaKnown RBP11.02□□□□□ -0.65
TFCP2-202ENST00000546822 ANO8Q9HCE9 1232 aaPredicted RBP11.02□□□□□ -0.65
TFCP2-202ENST00000546822 MAMSTRQ6ZN01 415 aa11.01□□□□□ -0.65
TFCP2-202ENST00000546822 CCAR1Q8IX12 1150 aaKnown RBP11.01□□□□□ -0.65
TFCP2-202ENST00000546822 UNC13BO14795 1591 aa11.01□□□□□ -0.65
TFCP2-202ENST00000546822 CAMSAP2Q08AD1 1489 aa11□□□□□ -0.65
TFCP2-202ENST00000546822 MBD5Q9P267 1494 aa11□□□□□ -0.65
TFCP2-202ENST00000546822 PNISRQ8TF01 805 aaKnown RBP11□□□□□ -0.65
TFCP2-202ENST00000546822 PPP1R12CQ9BZL4 782 aa11□□□□□ -0.65
TFCP2-202ENST00000546822 SSUH2Q9Y2M2 353 aa11□□□□□ -0.65
TFCP2-202ENST00000546822 CFAP65Q6ZU64 1925 aaKnown RBP10.99□□□□□ -0.65
TFCP2-202ENST00000546822 TMEM259Q4ZIN3 620 aa10.99□□□□□ -0.65
TFCP2-202ENST00000546822 SEPT12Q8IYM1 358 aa10.99□□□□□ -0.65
TFCP2-202ENST00000546822 JADE2Q9NQC1 790 aa10.99□□□□□ -0.65
TFCP2-202ENST00000546822 TBX22Q9Y458 520 aa10.99□□□□□ -0.65
TFCP2-202ENST00000546822 PTCH1Q13635 1447 aa10.99□□□□□ -0.65
TFCP2-202ENST00000546822 C7P10643 843 aa10.98□□□□□ -0.65
TFCP2-202ENST00000546822 CCDC144BQ3MJ40 725 aa10.98□□□□□ -0.65
TFCP2-202ENST00000546822 C4orf46Q504U0 113 aa10.98□□□□□ -0.65
TFCP2-202ENST00000546822 CACTIN-AS1Q8N1I8 211 aa10.98□□□□□ -0.65
TFCP2-202ENST00000546822 ZCRB1Q8TBF4 217 aaKnown RBP10.98□□□□□ -0.65
TFCP2-202ENST00000546822 REPIN1Q9BWE0 567 aaKnown RBP10.98□□□□□ -0.65
TFCP2-202ENST00000546822 KCNG1Q9UIX4 513 aa10.98□□□□□ -0.65
TFCP2-202ENST00000546822 COMMD10Q9Y6G5 202 aa10.98□□□□□ -0.65
TFCP2-202ENST00000546822 CAMTA1Q9Y6Y1 1673 aa10.98□□□□□ -0.65
TFCP2-202ENST00000546822 CHD2O14647 1828 aaKnown RBP10.98□□□□□ -0.65
TFCP2-202ENST00000546822 GNPATO15228 680 aa10.97□□□□□ -0.65
TFCP2-202ENST00000546822 CAPN15O75808 1086 aa10.97□□□□□ -0.65
TFCP2-202ENST00000546822 ABL2P42684 1182 aa10.97□□□□□ -0.65
TFCP2-202ENST00000546822 IDI1Q13907 227 aa10.97□□□□□ -0.65
TFCP2-202ENST00000546822 RINLQ6ZS11 566 aa10.97□□□□□ -0.65
TFCP2-202ENST00000546822 IPO4Q8TEX9 1081 aaKnown RBP10.97□□□□□ -0.65
TFCP2-202ENST00000546822 DDX27Q96GQ7 796 aaKnown RBP10.97□□□□□ -0.65
TFCP2-202ENST00000546822 TANGO6Q9C0B7 1094 aa10.97□□□□□ -0.65
TFCP2-202ENST00000546822 PRM3Q9NNZ6 103 aa10.97□□□□□ -0.65
TFCP2-202ENST00000546822 NAP1L2Q9ULW6 460 aaPredicted RBP10.97□□□□□ -0.65
TFCP2-202ENST00000546822 ZBTB12Q9Y330 459 aaPredicted RBP10.97□□□□□ -0.65
TFCP2-202ENST00000546822 NINLQ9Y2I6 1382 aa10.97□□□□□ -0.65
TFCP2-202ENST00000546822 PIK3C2BO00750 1634 aa10.97□□□□□ -0.65
TFCP2-202ENST00000546822 BRWD3Q6RI45 1802 aa10.96□□□□□ -0.65
TFCP2-202ENST00000546822 RALGAPBQ86X10 1494 aa10.96□□□□□ -0.65
TFCP2-202ENST00000546822 CCER2I3L3R5 266 aa10.96□□□□□ -0.65
TFCP2-202ENST00000546822 GIGYF1O75420 1035 aaPredicted RBP10.96□□□□□ -0.65
TFCP2-202ENST00000546822 RFC5P40937 340 aa10.96□□□□□ -0.65
TFCP2-202ENST00000546822 PIK3R5Q8WYR1 880 aa10.96□□□□□ -0.65
TFCP2-202ENST00000546822 MST1RQ04912 1400 aa10.95□□□□□ -0.66
TFCP2-202ENST00000546822 ANKRD33BA6NCL7 494 aa10.95□□□□□ -0.66
TFCP2-202ENST00000546822 PHF14O94880 888 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms