RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 FMN1Q68DA7 1419 aa10.07□□□□□ -0.8
ATXN3-216ENST00000545170 VPS8Q8N3P4 1428 aa10.07□□□□□ -0.8
ATXN3-216ENST00000545170 GOLGA6L9A6NEM1 432 aa10.07□□□□□ -0.8
ATXN3-216ENST00000545170 ZFYP08048 801 aaPredicted RBP10.06□□□□□ -0.8
ATXN3-216ENST00000545170 CCDC171Q6TFL3 1326 aa10.06□□□□□ -0.8
ATXN3-216ENST00000545170 HLTFQ14527 1009 aaKnown RBP eCLIP10.06□□□□□ -0.8
ATXN3-216ENST00000545170 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.06□□□□□ -0.8
ATXN3-216ENST00000545170 CCDC114Q96M63 670 aa10.06□□□□□ -0.8
ATXN3-216ENST00000545170 ST20-MTHFSA0A0A6YYL1 179 aa10.06□□□□□ -0.8
ATXN3-216ENST00000545170 SSBP05455 408 aaKnown RBP eCLIP10.06□□□□□ -0.8
ATXN3-216ENST00000545170 MAP2K2P36507 400 aa10.06□□□□□ -0.8
ATXN3-216ENST00000545170 WASHC4Q2M389 1173 aa10.06□□□□□ -0.8
ATXN3-216ENST00000545170 CNTLNQ9NXG0 1405 aa10.06□□□□□ -0.8
ATXN3-216ENST00000545170 XRCC6P12956 609 aaKnown RBP eCLIP10.06□□□□□ -0.8
ATXN3-216ENST00000545170 SSFA2P28290 1259 aa10.06□□□□□ -0.8
ATXN3-216ENST00000545170 HSP90AB4PQ58FF6 505 aa10.06□□□□□ -0.8
ATXN3-216ENST00000545170 DDX46Q7L014 1031 aaKnown RBP10.06□□□□□ -0.8
ATXN3-216ENST00000545170 WDR63Q8IWG1 891 aa10.06□□□□□ -0.8
ATXN3-216ENST00000545170 ATRIPQ8WXE1 791 aa10.06□□□□□ -0.8
ATXN3-216ENST00000545170 FSD1Q9BTV5 496 aa10.06□□□□□ -0.8
ATXN3-216ENST00000545170 PANK2Q9BZ23 570 aa10.06□□□□□ -0.8
ATXN3-216ENST00000545170 EIF2S2P20042 333 aaKnown RBP10.06□□□□□ -0.8
ATXN3-216ENST00000545170 DNA2P51530 1060 aa10.06□□□□□ -0.8
ATXN3-216ENST00000545170 GSDMDP57764 484 aa10.06□□□□□ -0.8
ATXN3-216ENST00000545170 RPAINQ86UA6 219 aa10.06□□□□□ -0.8
ATXN3-216ENST00000545170 CCDC83Q8IWF9 413 aa10.06□□□□□ -0.8
ATXN3-216ENST00000545170 RBM27Q9P2N5 1060 aaKnown RBP10.06□□□□□ -0.8
ATXN3-216ENST00000545170 FAM177BA6PVY3 158 aa10.05□□□□□ -0.8
ATXN3-216ENST00000545170 KRT18P05783 430 aaKnown RBP10.05□□□□□ -0.8
ATXN3-216ENST00000545170 RIPK4P57078 832 aa10.05□□□□□ -0.8
ATXN3-216ENST00000545170 CDCA7LQ96GN5 454 aa10.05□□□□□ -0.8
ATXN3-216ENST00000545170 FEZ1Q99689 392 aa10.05□□□□□ -0.8
ATXN3-216ENST00000545170 PAFAH1B1P43034 410 aa10.05□□□□□ -0.8
ATXN3-216ENST00000545170 ANKRD1Q15327 319 aa10.05□□□□□ -0.8
ATXN3-216ENST00000545170 TMC6Q7Z403 805 aa10.05□□□□□ -0.8
ATXN3-216ENST00000545170 DDX23Q9BUQ8 820 aaKnown RBP10.05□□□□□ -0.8
ATXN3-216ENST00000545170 NSRP1Q9H0G5 558 aaKnown RBP10.05□□□□□ -0.8
ATXN3-216ENST00000545170 ANO10Q9NW15 660 aa10.05□□□□□ -0.8
ATXN3-216ENST00000545170 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.05□□□□□ -0.8
ATXN3-216ENST00000545170 V9GYY5 206 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-216ENST00000545170 ZSCAN23Q3MJ62 389 aa10.05□□□□□ -0.8
ATXN3-216ENST00000545170 ANKS4BQ8N8V4 417 aa10.05□□□□□ -0.8
ATXN3-216ENST00000545170 ZBTB9Q96C00 473 aa10.05□□□□□ -0.8
ATXN3-216ENST00000545170 HMGB1P09429 215 aaKnown RBP10.05□□□□□ -0.8
ATXN3-216ENST00000545170 ANKRD18BA2A2Z9 1011 aa10.04□□□□□ -0.8
ATXN3-216ENST00000545170 VGFO15240 615 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-216ENST00000545170 CHMP7Q8WUX9 453 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-216ENST00000545170 RUNDC1Q96C34 613 aa10.04□□□□□ -0.8
ATXN3-216ENST00000545170 C1orf115Q9H7X2 142 aa10.04□□□□□ -0.8
ATXN3-216ENST00000545170 FAM184BQ9ULE4 1060 aa10.04□□□□□ -0.8
ATXN3-216ENST00000545170 NOL3O60936 208 aaKnown RBP10.04□□□□□ -0.8
ATXN3-216ENST00000545170 AP1ARQ63HQ0 302 aa10.04□□□□□ -0.8
ATXN3-216ENST00000545170 GTF3C6Q969F1 213 aa10.04□□□□□ -0.8
ATXN3-216ENST00000545170 HOMEZQ8IX15 550 aa10.04□□□□□ -0.8
ATXN3-216ENST00000545170 CEP120Q8N960 986 aa10.04□□□□□ -0.8
ATXN3-216ENST00000545170 FEZ2Q9UHY8 353 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-216ENST00000545170 CTDP1Q9Y5B0 961 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-216ENST00000545170 GCC1Q96CN9 775 aa10.04□□□□□ -0.8
ATXN3-216ENST00000545170 GSTTP1A0A1W2PQM5 241 aa10.04□□□□□ -0.8
ATXN3-216ENST00000545170 FKBP5Q13451 457 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-216ENST00000545170 SEPT14Q6ZU15 432 aa10.04□□□□□ -0.8
ATXN3-216ENST00000545170 CCDC12Q8WUD4 166 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-216ENST00000545170 FYB1O15117 783 aa10.04□□□□□ -0.8
ATXN3-216ENST00000545170 BUB1BO60566 1050 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-216ENST00000545170 NGEFQ8N5V2 710 aa10.04□□□□□ -0.8
ATXN3-216ENST00000545170 NAA15Q9BXJ9 866 aaKnown RBP10.04□□□□□ -0.8
ATXN3-216ENST00000545170 ZBTB12Q9Y330 459 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-216ENST00000545170 USP47Q96K76 1375 aa10.03□□□□□ -0.8
ATXN3-216ENST00000545170 FMNL3Q8IVF7 1028 aa10.03□□□□□ -0.8
ATXN3-216ENST00000545170 UVSSAQ2YD98 709 aa10.03□□□□□ -0.8
ATXN3-216ENST00000545170 MTMR7Q9Y216 660 aa10.03□□□□□ -0.8
ATXN3-216ENST00000545170 ANKRD30AQ9BXX3 1397 aa10.03□□□□□ -0.8
ATXN3-216ENST00000545170 LTV1Q96GA3 475 aaPredicted RBP10.03□□□□□ -0.8
ATXN3-216ENST00000545170 FAM114A2Q9NRY5 505 aa10.03□□□□□ -0.8
ATXN3-216ENST00000545170 AMPHP49418 695 aa10.02□□□□□ -0.8
ATXN3-216ENST00000545170 PDE1CQ14123 709 aaPredicted RBP10.02□□□□□ -0.8
ATXN3-216ENST00000545170 PDRG1Q9NUG6 133 aa10.02□□□□□ -0.8
ATXN3-216ENST00000545170 WRNQ14191 1432 aaPredicted RBP eCLIP10.02□□□□□ -0.8
ATXN3-216ENST00000545170 MXRA7P84157 204 aa10.02□□□□□ -0.8
ATXN3-216ENST00000545170 GCKP35557 465 aa10.02□□□□□ -0.81
ATXN3-216ENST00000545170 HIP1O00291 1037 aa10.02□□□□□ -0.81
ATXN3-216ENST00000545170 OPA1O60313 960 aa10.02□□□□□ -0.81
ATXN3-216ENST00000545170 GNG11P61952 73 aa10.02□□□□□ -0.81
ATXN3-216ENST00000545170 NUP88Q99567 741 aaPredicted RBP10.02□□□□□ -0.81
ATXN3-216ENST00000545170 ZKSCAN5Q9Y2L8 839 aa10.02□□□□□ -0.81
ATXN3-216ENST00000545170 MATR3P43243 847 aaKnown RBP eCLIP10.02□□□□□ -0.81
ATXN3-216ENST00000545170 CKAP2LQ8IYA6 745 aa10.02□□□□□ -0.81
ATXN3-216ENST00000545170 CPLX3Q8WVH0 158 aa10.02□□□□□ -0.81
ATXN3-216ENST00000545170 SMG6Q86US8 1419 aaKnown RBP10.02□□□□□ -0.81
ATXN3-216ENST00000545170 MAP4K4O95819 1239 aaPredicted RBP10.02□□□□□ -0.81
ATXN3-216ENST00000545170 LMNTD2Q8IXW0 634 aa10.02□□□□□ -0.81
ATXN3-216ENST00000545170 NUP155O75694 1391 aa10.01□□□□□ -0.81
ATXN3-216ENST00000545170 SLU7O95391 586 aaKnown RBP10.01□□□□□ -0.81
ATXN3-216ENST00000545170 NBPF8Q3BBV2 869 aa10.01□□□□□ -0.81
ATXN3-216ENST00000545170 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
ATXN3-216ENST00000545170 RRAGDQ9NQL2 400 aaPredicted RBP10.01□□□□□ -0.81
ATXN3-216ENST00000545170 NEUROD6Q96NK8 337 aa10.01□□□□□ -0.81
ATXN3-216ENST00000545170 ZHX3Q9H4I2 956 aa10.01□□□□□ -0.81
ATXN3-216ENST00000545170 USO1O60763 962 aaKnown RBP10.01□□□□□ -0.81
ATXN3-216ENST00000545170 U2AF2P26368 475 aaKnown RBP eCLIP10.01□□□□□ -0.814e-7■■■□□ 17.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms