RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 BARGINQ6ZT62 677 aa17.49■□□□□ 0.39
DDX11-227ENST00000544652 QTRT2Q9H974 415 aaKnown RBP17.49■□□□□ 0.39
DDX11-227ENST00000544652 MEGF6O75095 1541 aa17.48■□□□□ 0.39
DDX11-227ENST00000544652 U2SURPO15042 1029 aaKnown RBP17.48■□□□□ 0.39
DDX11-227ENST00000544652 TCP11L2Q8N4U5 519 aa17.48■□□□□ 0.39
DDX11-227ENST00000544652 SULT6B1Q6IMI4 303 aa17.47■□□□□ 0.39
DDX11-227ENST00000544652 USHBP1Q8N6Y0 703 aa17.47■□□□□ 0.39
DDX11-227ENST00000544652 ONECUT3O60422 494 aaPredicted RBP17.46■□□□□ 0.39
DDX11-227ENST00000544652 U2AF1L5P0DN76 240 aaPredicted RBP17.46■□□□□ 0.39
DDX11-227ENST00000544652 U2AF1Q01081 240 aaKnown RBP eCLIP17.46■□□□□ 0.39
DDX11-227ENST00000544652 AEBP1Q8IUX7 1158 aa17.46■□□□□ 0.39
DDX11-227ENST00000544652 RSPH6AQ9H0K4 717 aa17.46■□□□□ 0.39
DDX11-227ENST00000544652 USP35Q9P2H5 1018 aa17.46■□□□□ 0.39
DDX11-227ENST00000544652 OVOS2A0A0G2JMS6 1433 aa17.46■□□□□ 0.39
DDX11-227ENST00000544652 SCN11AQ9UI33 1791 aa17.45■□□□□ 0.38
DDX11-227ENST00000544652 FCHSD2O94868 740 aa17.45■□□□□ 0.38
DDX11-227ENST00000544652 HMOX1P09601 288 aa17.45■□□□□ 0.38
DDX11-227ENST00000544652 WDR43Q15061 677 aaKnown RBP eCLIP17.45■□□□□ 0.38
DDX11-227ENST00000544652 CCDC9Q9Y3X0 531 aaKnown RBP17.45■□□□□ 0.38
DDX11-227ENST00000544652 SBF2Q86WG5 1849 aa17.44■□□□□ 0.38
DDX11-227ENST00000544652 IL2RBP14784 551 aa17.44■□□□□ 0.38
DDX11-227ENST00000544652 RBM6P78332 1123 aaKnown RBP17.44■□□□□ 0.38
DDX11-227ENST00000544652 CDCA7Q9BWT1 371 aaPredicted RBP17.44■□□□□ 0.38
DDX11-227ENST00000544652 ADAMTS8Q9UP79 889 aa17.44■□□□□ 0.38
DDX11-227ENST00000544652 ADAMTS7Q9UKP4 1686 aa17.43■□□□□ 0.38
DDX11-227ENST00000544652 POTEAQ6S8J7 498 aa17.43■□□□□ 0.38
DDX11-227ENST00000544652 PLEKHF1Q96S99 279 aa17.43■□□□□ 0.38
DDX11-227ENST00000544652 ATF5Q9Y2D1 282 aaPredicted RBP17.43■□□□□ 0.38
DDX11-227ENST00000544652 SAMD1Q6SPF0 538 aaPredicted RBP17.42■□□□□ 0.38
DDX11-227ENST00000544652 RAPGEF4Q8WZA2 1011 aa17.42■□□□□ 0.38
DDX11-227ENST00000544652 ITGB4P16144 1822 aa17.42■□□□□ 0.38
DDX11-227ENST00000544652 TNS2Q63HR2 1409 aa17.41■□□□□ 0.38
DDX11-227ENST00000544652 TATP17735 454 aaPredicted RBP17.41■□□□□ 0.38
DDX11-227ENST00000544652 PNNQ9H307 717 aaKnown RBP17.41■□□□□ 0.38
DDX11-227ENST00000544652 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.41■□□□□ 0.38
DDX11-227ENST00000544652 PRKAR2BP31323 418 aa17.4■□□□□ 0.38
DDX11-227ENST00000544652 FAM98CQ17RN3 349 aaKnown RBP17.4■□□□□ 0.38
DDX11-227ENST00000544652 TOGARAM1Q9Y4F4 1720 aa17.39■□□□□ 0.37
DDX11-227ENST00000544652 SIPA1L3O60292 1781 aaPredicted RBP17.39■□□□□ 0.37
DDX11-227ENST00000544652 RXRBP28702 533 aa17.39■□□□□ 0.37
DDX11-227ENST00000544652 DOT1LQ8TEK3 1739 aa17.38■□□□□ 0.37
DDX11-227ENST00000544652 RGS12O14924 1447 aa17.38■□□□□ 0.37
DDX11-227ENST00000544652 AMOTQ4VCS5 1084 aa17.37■□□□□ 0.37
DDX11-227ENST00000544652 FAM9BQ8IZU0 186 aa17.37■□□□□ 0.37
DDX11-227ENST00000544652 RUNDC1Q96C34 613 aa17.37■□□□□ 0.37
DDX11-227ENST00000544652 PHACTR3Q96KR7 559 aa17.37■□□□□ 0.37
DDX11-227ENST00000544652 PLEKHO1Q53GL0 409 aaPredicted RBP17.36■□□□□ 0.37
DDX11-227ENST00000544652 ZCRB1Q8TBF4 217 aaKnown RBP17.36■□□□□ 0.37
DDX11-227ENST00000544652 KAT6BQ8WYB5 2073 aa17.35■□□□□ 0.37
DDX11-227ENST00000544652 EXOC5O00471 708 aa17.35■□□□□ 0.37
DDX11-227ENST00000544652 DDB1Q16531 1140 aa17.35■□□□□ 0.37
DDX11-227ENST00000544652 SEPT12Q8IYM1 358 aa17.35■□□□□ 0.37
DDX11-227ENST00000544652 SPG7Q9UQ90 795 aa17.35■□□□□ 0.37
DDX11-227ENST00000544652 MTHFSDQ2M296 383 aaKnown RBP17.34■□□□□ 0.37
DDX11-227ENST00000544652 CCDC146Q8IYE0 955 aa17.34■□□□□ 0.37
DDX11-227ENST00000544652 PCDH11XQ9BZA7 1347 aa17.34■□□□□ 0.37
DDX11-227ENST00000544652 PCDH11YQ9BZA8 1340 aa17.34■□□□□ 0.37
DDX11-227ENST00000544652 NHSQ6T4R5 1651 aa17.33■□□□□ 0.37
DDX11-227ENST00000544652 MAPK8IP3Q9UPT6 1336 aa17.33■□□□□ 0.36
DDX11-227ENST00000544652 NEFMP07197 916 aa17.33■□□□□ 0.36
DDX11-227ENST00000544652 GAS2L2Q8NHY3 880 aa17.32■□□□□ 0.36
DDX11-227ENST00000544652 BCL9O00512 1426 aa17.31■□□□□ 0.36
DDX11-227ENST00000544652 CYP27B1O15528 508 aa17.31■□□□□ 0.36
DDX11-227ENST00000544652 PHKG2P15735 406 aa17.3■□□□□ 0.36
DDX11-227ENST00000544652 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
DDX11-227ENST00000544652 NKX1-1Q15270 411 aaPredicted RBP17.3■□□□□ 0.36
DDX11-227ENST00000544652 NFE2L2Q16236 605 aa17.3■□□□□ 0.36
DDX11-227ENST00000544652 AKAP4Q5JQC9 854 aa17.3■□□□□ 0.36
DDX11-227ENST00000544652 ZNF530Q6P9A1 599 aaPredicted RBP17.3■□□□□ 0.36
DDX11-227ENST00000544652 IFNL2Q8IZJ0 200 aa17.3■□□□□ 0.36
DDX11-227ENST00000544652 U3KPZ7 1027 aaPredicted RBP17.3■□□□□ 0.36
DDX11-227ENST00000544652 MAP3K5Q99683 1374 aa17.29■□□□□ 0.36
DDX11-227ENST00000544652 A0A0G2JS52 829 aa17.29■□□□□ 0.36
DDX11-227ENST00000544652 MYT1Q01538 1121 aa17.29■□□□□ 0.36
DDX11-227ENST00000544652 MARCH10Q8NA82 808 aaPredicted RBP17.29■□□□□ 0.36
DDX11-227ENST00000544652 KDM6AO15550 1401 aaPredicted RBP17.29■□□□□ 0.36
DDX11-227ENST00000544652 BTAF1O14981 1849 aa17.28■□□□□ 0.36
DDX11-227ENST00000544652 TNS1Q9HBL0 1735 aaKnown RBP17.28■□□□□ 0.36
DDX11-227ENST00000544652 APAF1O14727 1248 aa17.28■□□□□ 0.36
DDX11-227ENST00000544652 PDE3BQ13370 1112 aa17.28■□□□□ 0.36
DDX11-227ENST00000544652 MRC1P22897 1456 aa17.28■□□□□ 0.36
DDX11-227ENST00000544652 PAPPAQ13219 1627 aa17.28■□□□□ 0.36
DDX11-227ENST00000544652 KDM3BQ7LBC6 1761 aa17.28■□□□□ 0.36
DDX11-227ENST00000544652 C1orf141Q5JVX7 400 aa17.27■□□□□ 0.36
DDX11-227ENST00000544652 KRT27Q7Z3Y8 459 aa17.27■□□□□ 0.36
DDX11-227ENST00000544652 DDX54Q8TDD1 881 aaKnown RBP17.27■□□□□ 0.36
DDX11-227ENST00000544652 GNAT3A8MTJ3 354 aa17.26■□□□□ 0.35
DDX11-227ENST00000544652 HTATSF1O43719 755 aaKnown RBP17.26■□□□□ 0.35
DDX11-227ENST00000544652 HSP90AB1P08238 724 aaKnown RBP17.26■□□□□ 0.35
DDX11-227ENST00000544652 CEMIPQ8WUJ3 1361 aa17.26■□□□□ 0.35
DDX11-227ENST00000544652 UBR2Q8IWV8 1755 aa17.25■□□□□ 0.35
DDX11-227ENST00000544652 RIPK4P57078 832 aa17.25■□□□□ 0.35
DDX11-227ENST00000544652 NGEFQ8N5V2 710 aa17.25■□□□□ 0.35
DDX11-227ENST00000544652 CCDC27Q2M243 656 aa17.24■□□□□ 0.35
DDX11-227ENST00000544652 DCAF5Q96JK2 942 aa17.24■□□□□ 0.35
DDX11-227ENST00000544652 TRIM35Q9UPQ4 493 aa17.24■□□□□ 0.35
DDX11-227ENST00000544652 LY75O60449 1722 aa17.24■□□□□ 0.35
DDX11-227ENST00000544652 RRP7AQ9Y3A4 280 aaKnown RBP17.23■□□□□ 0.35
DDX11-227ENST00000544652 RGPD3A6NKT7 1758 aaPredicted RBP17.23■□□□□ 0.35
DDX11-227ENST00000544652 RGPD4Q7Z3J3 1758 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms