RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-231ENST00000544639 RAB15P59190 212 aa8.22□□□□□ -1.09
RAP1B-231ENST00000544639 MAP7D1Q3KQU3 841 aa8.22□□□□□ -1.09
RAP1B-231ENST00000544639 TSGA10IPQ3SY00 556 aa8.22□□□□□ -1.09
RAP1B-231ENST00000544639 USP17L2Q6R6M4 530 aa8.22□□□□□ -1.09
RAP1B-231ENST00000544639 USP17L1Q7RTZ2 530 aa8.22□□□□□ -1.09
RAP1B-231ENST00000544639 PLEKHM2Q8IWE5 1019 aa8.22□□□□□ -1.09
RAP1B-231ENST00000544639 DOLKQ9UPQ8 538 aa8.22□□□□□ -1.09
RAP1B-231ENST00000544639 ERVH48-1M5A8F1 160 aa8.21□□□□□ -1.1
RAP1B-231ENST00000544639 ZIC2O95409 532 aaPredicted RBP8.21□□□□□ -1.1
RAP1B-231ENST00000544639 NR3C2P08235 984 aa8.21□□□□□ -1.1
RAP1B-231ENST00000544639 ITPKCQ96DU7 683 aa8.21□□□□□ -1.1
RAP1B-231ENST00000544639 PURBQ96QR8 312 aaKnown RBP8.21□□□□□ -1.1
RAP1B-231ENST00000544639 PCDHB11Q9Y5F2 797 aa8.21□□□□□ -1.1
RAP1B-231ENST00000544639 LZTS3O60299 673 aaPredicted RBP8.2□□□□□ -1.1
RAP1B-231ENST00000544639 RFX1P22670 979 aa8.2□□□□□ -1.1
RAP1B-231ENST00000544639 SRPK2P78362 688 aaKnown RBP8.2□□□□□ -1.1
RAP1B-231ENST00000544639 NCOA4Q13772 614 aa8.2□□□□□ -1.1
RAP1B-231ENST00000544639 CCDC116Q8IYX3 515 aa8.2□□□□□ -1.1
RAP1B-231ENST00000544639 DEPDC4Q8N2C3 294 aa8.2□□□□□ -1.1
RAP1B-231ENST00000544639 ZFAND3Q9H8U3 227 aa8.2□□□□□ -1.1
RAP1B-231ENST00000544639 GMPRP36959 345 aa8.19□□□□□ -1.1
RAP1B-231ENST00000544639 DHX9Q08211 1270 aaKnown RBP8.19□□□□□ -1.1
RAP1B-231ENST00000544639 PBXIP1Q96AQ6 731 aa8.19□□□□□ -1.1
RAP1B-231ENST00000544639 CDCA7Q9BWT1 371 aaPredicted RBP8.19□□□□□ -1.1
RAP1B-231ENST00000544639 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.18□□□□□ -1.1
RAP1B-231ENST00000544639 FAM181BA6NEQ2 426 aa8.18□□□□□ -1.1
RAP1B-231ENST00000544639 EML3Q32P44 896 aa8.18□□□□□ -1.1
RAP1B-231ENST00000544639 OXLD1Q5BKU9 147 aa8.18□□□□□ -1.1
RAP1B-231ENST00000544639 PPP1R26Q5T8A7 1209 aaPredicted RBP8.18□□□□□ -1.1
RAP1B-231ENST00000544639 PPP1R15AO75807 674 aaPredicted RBP8.17□□□□□ -1.1
RAP1B-231ENST00000544639 UPP2O95045 317 aa8.17□□□□□ -1.1
RAP1B-231ENST00000544639 KANK4Q5T7N3 995 aaPredicted RBP8.17□□□□□ -1.1
RAP1B-231ENST00000544639 MEIOBQ8N635 442 aa8.17□□□□□ -1.1
RAP1B-231ENST00000544639 TMPRSS4Q9NRS4 437 aa8.17□□□□□ -1.1
RAP1B-231ENST00000544639 VSIG8P0DPA2 414 aa8.16□□□□□ -1.1
RAP1B-231ENST00000544639 SCTRP47872 440 aa8.16□□□□□ -1.1
RAP1B-231ENST00000544639 ERVK-9P63128 1117 aa8.16□□□□□ -1.1
RAP1B-231ENST00000544639 ZNF784Q8NCA9 323 aaPredicted RBP8.16□□□□□ -1.1
RAP1B-231ENST00000544639 MKRN1Q9UHC7 482 aaKnown RBP8.16□□□□□ -1.1
RAP1B-231ENST00000544639 EMILIN1Q9Y6C2 1016 aa8.16□□□□□ -1.1
RAP1B-231ENST00000544639 ERBB4Q15303 1308 aa8.15□□□□□ -1.1
RAP1B-231ENST00000544639 VEGFBP49765 207 aa8.15□□□□□ -1.1
RAP1B-231ENST00000544639 LINC00528Q8N1L1 170 aa8.15□□□□□ -1.1
RAP1B-231ENST00000544639 ZSCAN1Q8NBB4 408 aa8.15□□□□□ -1.1
RAP1B-231ENST00000544639 VRTNQ9H8Y1 702 aa8.15□□□□□ -1.1
RAP1B-231ENST00000544639 NOD1Q9Y239 953 aa8.15□□□□□ -1.1
RAP1B-231ENST00000544639 ATP5J2-PTCD1G3V325 749 aa8.14□□□□□ -1.11
RAP1B-231ENST00000544639 MAN1A2O60476 641 aa8.14□□□□□ -1.11
RAP1B-231ENST00000544639 LILRA1O75019 489 aa8.14□□□□□ -1.11
RAP1B-231ENST00000544639 LORP23490 312 aaPredicted RBP8.14□□□□□ -1.11
RAP1B-231ENST00000544639 USP4Q13107 963 aa8.14□□□□□ -1.11
RAP1B-231ENST00000544639 CDCA8Q53HL2 280 aa8.14□□□□□ -1.11
RAP1B-231ENST00000544639 C6orf118Q5T5N4 469 aa8.14□□□□□ -1.11
RAP1B-231ENST00000544639 CC2D2BQ6DHV5 1058 aa8.14□□□□□ -1.11
RAP1B-231ENST00000544639 SIRT1Q96EB6 747 aa8.14□□□□□ -1.11
RAP1B-231ENST00000544639 CYLDQ9NQC7 956 aa8.14□□□□□ -1.11
RAP1B-231ENST00000544639 PGPEP1Q9NXJ5 209 aa8.14□□□□□ -1.11
RAP1B-231ENST00000544639 SOBPA7XYQ1 873 aa8.13□□□□□ -1.11
RAP1B-231ENST00000544639 MYCP01106 439 aaPredicted RBP8.13□□□□□ -1.11
RAP1B-231ENST00000544639 BMP2P12643 396 aa8.13□□□□□ -1.11
RAP1B-231ENST00000544639 TRIM50Q86XT4 487 aa8.13□□□□□ -1.11
RAP1B-231ENST00000544639 TRIM52Q96A61 297 aa8.13□□□□□ -1.11
RAP1B-231ENST00000544639 TSEN34Q9BSV6 310 aaKnown RBP8.13□□□□□ -1.11
RAP1B-231ENST00000544639 SOS2Q07890 1332 aaPredicted RBP8.12□□□□□ -1.11
RAP1B-231ENST00000544639 FAM196BA6NMK8 535 aa8.12□□□□□ -1.11
RAP1B-231ENST00000544639 ATG7O95352 703 aa8.12□□□□□ -1.11
RAP1B-231ENST00000544639 GTF2IP78347 998 aa8.12□□□□□ -1.11
RAP1B-231ENST00000544639 OSBPL3Q9H4L5 887 aa8.12□□□□□ -1.11
RAP1B-231ENST00000544639 USP17L15C9J2P7 530 aa8.11□□□□□ -1.11
RAP1B-231ENST00000544639 USP17L10C9JJH3 530 aa8.11□□□□□ -1.11
RAP1B-231ENST00000544639 USP17L13C9JLJ4 530 aa8.11□□□□□ -1.11
RAP1B-231ENST00000544639 USP17L12C9JPN9 530 aa8.11□□□□□ -1.11
RAP1B-231ENST00000544639 USP17L11C9JVI0 530 aa8.11□□□□□ -1.11
RAP1B-231ENST00000544639 USP17L21D6R901 530 aa8.11□□□□□ -1.11
RAP1B-231ENST00000544639 USP17L18D6R9N7 530 aa8.11□□□□□ -1.11
RAP1B-231ENST00000544639 USP17L22D6RA61 530 aa8.11□□□□□ -1.11
RAP1B-231ENST00000544639 USP17L17D6RBQ6 530 aa8.11□□□□□ -1.11
RAP1B-231ENST00000544639 USP17L19D6RCP7 530 aa8.11□□□□□ -1.11
RAP1B-231ENST00000544639 USP17L20D6RJB6 530 aa8.11□□□□□ -1.11
RAP1B-231ENST00000544639 CLDN10P78369 228 aa8.11□□□□□ -1.11
RAP1B-231ENST00000544639 USP17L24Q0WX57 530 aa8.11□□□□□ -1.11
RAP1B-231ENST00000544639 CRTC2Q53ET0 693 aaPredicted RBP8.11□□□□□ -1.11
RAP1B-231ENST00000544639 PCDHGA11Q9Y5H2 935 aa8.11□□□□□ -1.11
RAP1B-231ENST00000544639 RASA1P20936 1047 aa8.1□□□□□ -1.11
RAP1B-231ENST00000544639 ADD1P35611 737 aaKnown RBP8.1□□□□□ -1.11
RAP1B-231ENST00000544639 ATP1A2P50993 1020 aa8.1□□□□□ -1.11
RAP1B-231ENST00000544639 PTK7Q13308 1070 aa8.1□□□□□ -1.11
RAP1B-231ENST00000544639 OGFOD1Q8N543 542 aa8.1□□□□□ -1.11
RAP1B-231ENST00000544639 ARXQ96QS3 562 aa8.1□□□□□ -1.11
RAP1B-231ENST00000544639 DNAAF2Q9NVR5 837 aaKnown RBP8.1□□□□□ -1.11
RAP1B-231ENST00000544639 ZBTB7BO15156 539 aaPredicted RBP8.09□□□□□ -1.11
RAP1B-231ENST00000544639 ELOAQ14241 798 aaKnown RBP8.09□□□□□ -1.11
RAP1B-231ENST00000544639 LARP1Q6PKG0 1096 aaKnown RBP8.09□□□□□ -1.11
RAP1B-231ENST00000544639 Q6ZVU0 165 aa8.09□□□□□ -1.11
RAP1B-231ENST00000544639 LARGE2Q8N3Y3 721 aa8.09□□□□□ -1.11
RAP1B-231ENST00000544639 ESF1Q9H501 851 aaKnown RBP8.09□□□□□ -1.11
RAP1B-231ENST00000544639 KIAA1024Q9UPX6 916 aa8.09□□□□□ -1.11
RAP1B-231ENST00000544639 ACIN1Q9UKV3 1341 aaKnown RBP8.08□□□□□ -1.12
RAP1B-231ENST00000544639 PPFIA3O75145 1194 aa8.08□□□□□ -1.12
RAP1B-231ENST00000544639 ADH1AP07327 375 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms