RNA–Protein interactions for RNA: ENST00000544054.5

ZCCHC8-208, Transcript of zinc finger CCHC-type containing 8, human

TSL 5

Gene ZCCHC8, Length 1,561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZCCHC8-208	ENST00000544054	COL25A1	Q9BXS0	654 aa	Predicted RBP	7.32	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	PRDM9	Q9NQV7	894 aa		7.32	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	MORN1	Q5T089	497 aa		7.31	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	PURB	Q96QR8	312 aa	Known RBP	7.31	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	PPP1R12C	Q9BZL4	782 aa		7.31	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	HMX1	Q9NP08	348 aa	Predicted RBP	7.31	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	RSF1	Q96T23	1441 aa	Predicted RBP	7.31	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	SRPK2	P78362	688 aa	Known RBP	7.3	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	MAP3K10	Q02779	954 aa		7.3	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	VAC14	Q08AM6	782 aa		7.3	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.3	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	HELB	Q8NG08	1087 aa	Predicted RBP	7.3	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.3	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	TRIM34	Q9BYJ4	488 aa		7.3	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	SLC27A5	Q9Y2P5	690 aa		7.3	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	URB2	Q14146	1524 aa	Known RBP	7.3	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	TSC1	Q92574	1164 aa		7.29	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	PCDHGC3	Q9UN70	934 aa		7.29	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	MTMR2	Q13614	643 aa		7.29	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	WHAMM	Q8TF30	809 aa		7.29	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	ALG2	Q9H553	416 aa		7.29	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	PALM3	A6NDB9	673 aa	Predicted RBP	7.28	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	LMOD1	P29536	600 aa	Predicted RBP	7.28	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	GUCA2A	Q02747	115 aa		7.28	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	GPR161	Q8N6U8	529 aa	Known RBP	7.28	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	LRRN4	Q8WUT4	740 aa		7.28	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	ENAM	Q9NRM1	1142 aa		7.28	□□□□□ -1.24
ZCCHC8-208	ENST00000544054	GPR37L1	O60883	481 aa		7.27	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	SKOR1	P84550	965 aa		7.27	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	CYB5RL	Q6IPT4	315 aa		7.27	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	HLA-C	Q95604	372 aa		7.27	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	RBM25	P49756	843 aa	Known RBP	7.26	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	PODN	Q7Z5L7	613 aa		7.26	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	TOP2A	P11388	1531 aa	Known RBP	7.26	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	CARNS1	A5YM72	827 aa		7.25	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	SIAH2	O43255	324 aa		7.25	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	SOX11	P35716	441 aa		7.25	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	TFIP11	Q9UBB9	837 aa	Known RBP	7.25	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	ZNF608	Q9ULD9	1512 aa	Predicted RBP	7.25	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	C6orf229	H3BNL8	230 aa		7.25	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	FURIN	P09958	794 aa		7.25	□□□□□ -1.25
ZCCHC8-208	ENST00000544054		Q3C1V9	767 aa		7.25	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	RNF19B	Q6ZMZ0	732 aa		7.25	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	NANOS1	Q8WY41	292 aa	Known RBP	7.25	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	CFAP99	D6REC4	459 aa		7.24	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	MMP16	P51512	607 aa		7.24	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	SEMA3F	Q13275	785 aa		7.24	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	BRICD5	Q6PL45	260 aa		7.24	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	EHBP1	Q8NDI1	1231 aa		7.24	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	PRR7	Q8TB68	274 aa		7.24	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	EPS8L1	Q8TE68	723 aa		7.24	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	VRTN	Q9H8Y1	702 aa		7.24	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	CDCA8	Q53HL2	280 aa		7.23	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	BEND7	Q8N7W2	519 aa	Predicted RBP	7.23	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	ZNF428	Q96B54	188 aa		7.23	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	UCN2	Q96RP3	112 aa		7.23	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	IFT140	Q96RY7	1462 aa		7.23	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	CCDC88B	A6NC98	1476 aa		7.22	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	ATG7	O95352	703 aa		7.22	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	PNMA1	Q8ND90	353 aa		7.22	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	IVNS1ABP	Q9Y6Y0	642 aa		7.22	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	CCDC27	Q2M243	656 aa		7.21	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	SYMPK	Q92797	1274 aa	Known RBP	7.21	□□□□□ -1.25
ZCCHC8-208	ENST00000544054	RIMBP3C	A6NJZ7	1639 aa		7.21	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	RIMBP3B	A6NNM3	1639 aa		7.21	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	RIMBP3	Q9UFD9	1639 aa		7.21	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	COBL	O75128	1261 aa		7.2	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	NR6A1	Q15406	480 aa		7.2	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	MAFB	Q9Y5Q3	323 aa	Predicted RBP	7.2	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	ARHGEF11	O15085	1522 aa		7.2	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	TMEM88B	A6NKF7	163 aa		7.2	□□□□□ -1.26
ZCCHC8-208	ENST00000544054		E9PSI1	815 aa		7.2	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	EIF4G2	P78344	907 aa	Known RBP eCLIP	7.2	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	RNFT1	Q5M7Z0	435 aa		7.2	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	USB1	Q9BQ65	265 aa	Known RBP	7.2	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	TOPBP1	Q92547	1522 aa		7.19	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	AQR	O60306	1485 aa	Known RBP eCLIP	7.19	□□□□□ -1.26	1e-6	■■■■■ 28.7
ZCCHC8-208	ENST00000544054	TBC1D9	Q6ZT07	1266 aa		7.19	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	KRTAP4-9	Q9BYQ8	210 aa		7.19	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	ADH1C	P00326	375 aa		7.18	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	ZMYM1	Q5SVZ6	1142 aa		7.18	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	SND1	Q7KZF4	910 aa	Known RBP eCLIP	7.18	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	ATP9B	O43861	1147 aa		7.17	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	PER1	O15534	1290 aa	Predicted RBP	7.16	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	B4GALNT3	Q6L9W6	998 aa		7.16	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	ALYREF	Q86V81	257 aa	Known RBP	7.16	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	AMOTL2	Q9Y2J4	779 aa		7.16	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	ABCC8	Q09428	1581 aa		7.16	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	LYPD4	Q6UWN0	246 aa		7.16	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	RETREG3	Q86VR2	466 aa		7.16	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	TDRD9	Q8NDG6	1382 aa	Known RBP	7.15	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	CNTNAP5	Q8WYK1	1306 aa		7.15	□□□□□ -1.26
ZCCHC8-208	ENST00000544054	DXO	O77932	396 aa	Known RBP	7.15	□□□□□ -1.27
ZCCHC8-208	ENST00000544054	TIMP2	P16035	220 aa		7.15	□□□□□ -1.27
ZCCHC8-208	ENST00000544054	ADAMTS2	O95450	1211 aa		7.14	□□□□□ -1.27
ZCCHC8-208	ENST00000544054	WDR4	P57081	412 aa	Known RBP	7.14	□□□□□ -1.27
ZCCHC8-208	ENST00000544054	NR1H3	Q13133	447 aa		7.14	□□□□□ -1.27
ZCCHC8-208	ENST00000544054	NNT	Q13423	1086 aa		7.14	□□□□□ -1.27
ZCCHC8-208	ENST00000544054	CCDC24	Q8N4L8	307 aa		7.14	□□□□□ -1.27
ZCCHC8-208	ENST00000544054	CHMP7	Q8WUX9	453 aa	Predicted RBP	7.14	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms