RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 KNDC1Q76NI1 1749 aa7.33□□□□□ -1.24
NPIPB4-219ENST00000543660 TRPM3Q9HCF6 1732 aaPredicted RBP7.33□□□□□ -1.24
NPIPB4-219ENST00000543660 ZBTB7AO95365 584 aa7.33□□□□□ -1.24
NPIPB4-219ENST00000543660 PDE3BQ13370 1112 aa7.33□□□□□ -1.24
NPIPB4-219ENST00000543660 BARGINQ6ZT62 677 aa7.33□□□□□ -1.24
NPIPB4-219ENST00000543660 ALS2Q96Q42 1657 aa7.32□□□□□ -1.24
NPIPB4-219ENST00000543660 PLSCR1O15162 318 aa7.32□□□□□ -1.24
NPIPB4-219ENST00000543660 CHRNA2Q15822 529 aa7.32□□□□□ -1.24
NPIPB4-219ENST00000543660 FHDC1Q9C0D6 1143 aaPredicted RBP7.32□□□□□ -1.24
NPIPB4-219ENST00000543660 STRN4Q9NRL3 753 aa7.32□□□□□ -1.24
NPIPB4-219ENST00000543660 USP35Q9P2H5 1018 aa7.32□□□□□ -1.24
NPIPB4-219ENST00000543660 CASZ1Q86V15 1759 aa7.32□□□□□ -1.24
NPIPB4-219ENST00000543660 CHD4Q14839 1912 aa7.32□□□□□ -1.24
NPIPB4-219ENST00000543660 IFT172Q9UG01 1749 aa7.32□□□□□ -1.24
NPIPB4-219ENST00000543660 KIAA0232Q92628 1395 aa7.32□□□□□ -1.24
NPIPB4-219ENST00000543660 ACIN1Q9UKV3 1341 aaKnown RBP7.31□□□□□ -1.24
NPIPB4-219ENST00000543660 GIGYF1O75420 1035 aaPredicted RBP7.31□□□□□ -1.24
NPIPB4-219ENST00000543660 PIK3C2GO75747 1445 aa7.31□□□□□ -1.24
NPIPB4-219ENST00000543660 ANKARQ7Z5J8 1434 aa7.31□□□□□ -1.24
NPIPB4-219ENST00000543660 MICALL2Q8IY33 904 aa7.31□□□□□ -1.24
NPIPB4-219ENST00000543660 EFCAB3Q8N7B9 438 aa7.31□□□□□ -1.24
NPIPB4-219ENST00000543660 CRYBG1Q9Y4K1 1723 aa7.31□□□□□ -1.24
NPIPB4-219ENST00000543660 MYOM1P52179 1685 aa7.31□□□□□ -1.24
NPIPB4-219ENST00000543660 GPRASP1Q5JY77 1395 aa7.31□□□□□ -1.24
NPIPB4-219ENST00000543660 ANKRD30BQ9BXX2 1392 aa7.31□□□□□ -1.24
NPIPB4-219ENST00000543660 SAFB2Q14151 953 aaKnown RBP eCLIP7.3□□□□□ -1.24
NPIPB4-219ENST00000543660 RGL3Q3MIN7 710 aa7.3□□□□□ -1.24
NPIPB4-219ENST00000543660 GPR153Q6NV75 609 aa7.3□□□□□ -1.24
NPIPB4-219ENST00000543660 LARP1Q6PKG0 1096 aaKnown RBP7.3□□□□□ -1.24
NPIPB4-219ENST00000543660 PTF1AQ7RTS3 328 aa7.3□□□□□ -1.24
NPIPB4-219ENST00000543660 IFNLR1Q8IU57 520 aaPredicted RBP7.3□□□□□ -1.24
NPIPB4-219ENST00000543660 TCP11L2Q8N4U5 519 aa7.3□□□□□ -1.24
NPIPB4-219ENST00000543660 PRAM1Q96QH2 718 aa7.3□□□□□ -1.24
NPIPB4-219ENST00000543660 PRR36Q9H6K5 1346 aa7.29□□□□□ -1.24
NPIPB4-219ENST00000543660 SPATA31E1Q6ZUB1 1445 aa7.29□□□□□ -1.24
NPIPB4-219ENST00000543660 SSH2Q76I76 1423 aa7.29□□□□□ -1.24
NPIPB4-219ENST00000543660 SLC34A2O95436 690 aa7.29□□□□□ -1.24
NPIPB4-219ENST00000543660 ZC3H6P61129 1189 aaKnown RBP7.29□□□□□ -1.24
NPIPB4-219ENST00000543660 C14orf93Q9H972 538 aaKnown RBP7.29□□□□□ -1.24
NPIPB4-219ENST00000543660 C11orf95C9JLR9 678 aaPredicted RBP7.28□□□□□ -1.24
NPIPB4-219ENST00000543660 SOX12O15370 315 aa7.28□□□□□ -1.24
NPIPB4-219ENST00000543660 EVA1CP58658 441 aa7.28□□□□□ -1.24
NPIPB4-219ENST00000543660 TMEM92Q6UXU6 159 aa7.28□□□□□ -1.24
NPIPB4-219ENST00000543660 SPRYD3Q8NCJ5 442 aa7.28□□□□□ -1.24
NPIPB4-219ENST00000543660 BCL11BQ9C0K0 894 aaPredicted RBP7.28□□□□□ -1.24
NPIPB4-219ENST00000543660 PODXL2Q9NZ53 605 aa7.28□□□□□ -1.24
NPIPB4-219ENST00000543660 DHX57Q6P158 1386 aaKnown RBP7.28□□□□□ -1.24
NPIPB4-219ENST00000543660 RGPD3A6NKT7 1758 aaPredicted RBP7.28□□□□□ -1.24
NPIPB4-219ENST00000543660 RGPD4Q7Z3J3 1758 aa7.28□□□□□ -1.24
NPIPB4-219ENST00000543660 CFAP70Q5T0N1 1121 aa7.27□□□□□ -1.25
NPIPB4-219ENST00000543660 MTFR1LQ9H019 292 aa7.27□□□□□ -1.25
NPIPB4-219ENST00000543660 THRAP3Q9Y2W1 955 aaKnown RBP7.27□□□□□ -1.25
NPIPB4-219ENST00000543660 MAP3K5Q99683 1374 aa7.27□□□□□ -1.25
NPIPB4-219ENST00000543660 PEAK1Q9H792 1746 aa7.27□□□□□ -1.25
NPIPB4-219ENST00000543660 OVOS2A0A0G2JMS6 1433 aa7.27□□□□□ -1.25
NPIPB4-219ENST00000543660 OVOS2A0A0J9YW53 1432 aa7.27□□□□□ -1.25
NPIPB4-219ENST00000543660 OVOS2Q6IE36 1432 aa7.27□□□□□ -1.25
NPIPB4-219ENST00000543660 SLC15A2Q16348 729 aa7.26□□□□□ -1.25
NPIPB4-219ENST00000543660 NGDNQ8NEJ9 315 aaKnown RBP7.26□□□□□ -1.25
NPIPB4-219ENST00000543660 HIRIP3Q9BW71 556 aaPredicted RBP7.26□□□□□ -1.25
NPIPB4-219ENST00000543660 POGKQ9P215 609 aa7.26□□□□□ -1.25
NPIPB4-219ENST00000543660 DLC1Q96QB1 1528 aa7.26□□□□□ -1.25
NPIPB4-219ENST00000543660 PARP4Q9UKK3 1724 aaKnown RBP7.25□□□□□ -1.25
NPIPB4-219ENST00000543660 GPR162Q16538 588 aa7.25□□□□□ -1.25
NPIPB4-219ENST00000543660 TXNRD1Q16881 649 aa7.25□□□□□ -1.25
NPIPB4-219ENST00000543660 NUTM2GQ5VZR2 741 aa7.25□□□□□ -1.25
NPIPB4-219ENST00000543660 STK32BQ9NY57 414 aa7.25□□□□□ -1.25
NPIPB4-219ENST00000543660 SBF2Q86WG5 1849 aa7.24□□□□□ -1.25
NPIPB4-219ENST00000543660 CPDO75976 1380 aa7.24□□□□□ -1.25
NPIPB4-219ENST00000543660 PHRF1Q9P1Y6 1649 aaKnown RBP7.24□□□□□ -1.25
NPIPB4-219ENST00000543660 TULP4Q9NRJ4 1543 aa7.24□□□□□ -1.25
NPIPB4-219ENST00000543660 WASLO00401 505 aaPredicted RBP7.24□□□□□ -1.25
NPIPB4-219ENST00000543660 LMO7Q8WWI1 1683 aa7.24□□□□□ -1.25
NPIPB4-219ENST00000543660 BCL9O00512 1426 aa7.24□□□□□ -1.25
NPIPB4-219ENST00000543660 MINK1Q8N4C8 1332 aaPredicted RBP7.24□□□□□ -1.25
NPIPB4-219ENST00000543660 SHANK3Q9BYB0 1731 aa7.24□□□□□ -1.25
NPIPB4-219ENST00000543660 ATP7BP35670 1465 aa7.24□□□□□ -1.25
NPIPB4-219ENST00000543660 EIF3AQ14152 1382 aaKnown RBP7.23□□□□□ -1.25
NPIPB4-219ENST00000543660 DDB1Q16531 1140 aa7.23□□□□□ -1.25
NPIPB4-219ENST00000543660 MARCH10Q8NA82 808 aaPredicted RBP7.23□□□□□ -1.25
NPIPB4-219ENST00000543660 COL5A2P05997 1499 aaPredicted RBP7.23□□□□□ -1.25
NPIPB4-219ENST00000543660 CRB1P82279 1406 aa7.22□□□□□ -1.25
NPIPB4-219ENST00000543660 HSPA6P17066 643 aa7.22□□□□□ -1.25
NPIPB4-219ENST00000543660 ARSIQ5FYB1 569 aa7.22□□□□□ -1.25
NPIPB4-219ENST00000543660 ANKRD13DQ6ZTN6 518 aa7.22□□□□□ -1.25
NPIPB4-219ENST00000543660 TRAK1Q9UPV9 953 aa7.22□□□□□ -1.25
NPIPB4-219ENST00000543660 USP19O94966 1318 aa7.22□□□□□ -1.25
NPIPB4-219ENST00000543660 AATKQ6ZMQ8 1374 aa7.21□□□□□ -1.25
NPIPB4-219ENST00000543660 ADGRB1O14514 1584 aa7.21□□□□□ -1.25
NPIPB4-219ENST00000543660 LRRC37A3O60309 1634 aa7.21□□□□□ -1.26
NPIPB4-219ENST00000543660 ZNF316A6NFI3 1004 aaPredicted RBP7.21□□□□□ -1.26
NPIPB4-219ENST00000543660 GCP02774 474 aa7.21□□□□□ -1.26
NPIPB4-219ENST00000543660 NUDT16Q96DE0 195 aaKnown RBP7.21□□□□□ -1.26
NPIPB4-219ENST00000543660 MS4A4AQ96JQ5 239 aa7.21□□□□□ -1.26
NPIPB4-219ENST00000543660 POLR3AO14802 1390 aaPredicted RBP7.2□□□□□ -1.26
NPIPB4-219ENST00000543660 ECM2O94769 699 aaPredicted RBP7.2□□□□□ -1.26
NPIPB4-219ENST00000543660 LSM11P83369 360 aaKnown RBP eCLIP7.2□□□□□ -1.26
NPIPB4-219ENST00000543660 ABTB2Q8N961 1025 aa7.2□□□□□ -1.26
NPIPB4-219ENST00000543660 RIOK3O14730 519 aaKnown RBP7.19□□□□□ -1.26
NPIPB4-219ENST00000543660 YBX3P16989 372 aaKnown RBP eCLIP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms