RNA–Protein interactions for RNA: ENST00000541871.1

CACNA1C-IT2-201, CACNA1C intronic transcript 2, humanhuman

TSL 2 BASIC

Gene CACNA1C-IT2, Length 589 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT2-201ENST00000541871 SHROOM4Q9ULL8 1493 aa6.23□□□□□ -1.41
CACNA1C-IT2-201ENST00000541871 CELA2BP08218 269 aaPredicted RBP6.23□□□□□ -1.41
CACNA1C-IT2-201ENST00000541871 PTGIRP43119 386 aa6.23□□□□□ -1.41
CACNA1C-IT2-201ENST00000541871 SKIV2LQ15477 1246 aaKnown RBP6.23□□□□□ -1.41
CACNA1C-IT2-201ENST00000541871 FOXD4L5Q5VV16 416 aaPredicted RBP6.23□□□□□ -1.41
CACNA1C-IT2-201ENST00000541871 PPP2R2DQ66LE6 453 aa6.23□□□□□ -1.41
CACNA1C-IT2-201ENST00000541871 LYSMD3Q7Z3D4 306 aa6.23□□□□□ -1.41
CACNA1C-IT2-201ENST00000541871 GMCL1Q96IK5 515 aa6.23□□□□□ -1.41
CACNA1C-IT2-201ENST00000541871 ERVH48-1M5A8F1 160 aa6.22□□□□□ -1.41
CACNA1C-IT2-201ENST00000541871 LILRA1O75019 489 aa6.22□□□□□ -1.41
CACNA1C-IT2-201ENST00000541871 CDK11BP21127 795 aaKnown RBP6.22□□□□□ -1.41
CACNA1C-IT2-201ENST00000541871 ADD1P35611 737 aaKnown RBP6.22□□□□□ -1.41
CACNA1C-IT2-201ENST00000541871 RAB15P59190 212 aa6.21□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 GAS6Q14393 721 aa6.21□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 SH3D19Q5HYK7 790 aa6.21□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 DZIP3Q86Y13 1208 aaKnown RBP6.21□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 SEPT12Q8IYM1 358 aa6.21□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 KDF1Q8NAX2 398 aaPredicted RBP6.21□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.21□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 PHF20L1A8MW92 1017 aa6.2□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 ESPNB1AK53 854 aa6.2□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 UBTFP17480 764 aaKnown RBP6.2□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 RNF144AP50876 292 aaPredicted RBP6.2□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 CUEDC1Q9NWM3 386 aaPredicted RBP6.2□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 AP1G2O75843 785 aa6.19□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 FBXO31Q5XUX0 539 aaPredicted RBP6.19□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 FOXR1Q6PIV2 292 aa6.19□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 TRIM22Q8IYM9 498 aa6.19□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 UBE2Q2Q8WVN8 375 aa6.19□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 MBIPQ9NS73 344 aa6.19□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 GPC1P35052 558 aa6.18□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 PRICKLE2Q7Z3G6 844 aa6.18□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 PROCA1Q8NCQ7 364 aaPredicted RBP6.18□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 ZNF837Q96EG3 531 aaPredicted RBP6.18□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 ATP1B4Q9UN42 357 aaPredicted RBP6.18□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 BEND7Q8N7W2 519 aaPredicted RBP6.17□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 EPS8L1Q8TE68 723 aa6.17□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 DDRGK1Q96HY6 314 aa6.17□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 IGF1RP08069 1367 aa6.17□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 H7C1W4 665 aa6.16□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 MSTNO14793 375 aa6.16□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 RHOQP17081 205 aa6.16□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 PLA2G4EQ3MJ16 856 aa6.16□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 PODNQ7Z5L7 613 aa6.16□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 CCDC125Q86Z20 511 aa6.16□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 DCAF5Q96JK2 942 aa6.16□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 CYLDQ9NQC7 956 aa6.16□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 ATP5J2-PTCD1G3V325 749 aa6.15□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 USP17L8P0C7I0 530 aa6.15□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 BCRP11274 1271 aa6.15□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 DBN1Q16643 649 aa6.15□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 NEDD1Q8NHV4 660 aa6.15□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 HMX1Q9NP08 348 aaPredicted RBP6.15□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 LRRC4BQ9NT99 713 aa6.15□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 DYRK1BQ9Y463 629 aa6.15□□□□□ -1.42
CACNA1C-IT2-201ENST00000541871 CNTNAP5Q8WYK1 1306 aa6.15□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 GPR25O00155 361 aa6.14□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 HSP90B1P14625 803 aaKnown RBP6.14□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 BRD2P25440 801 aaKnown RBP6.14□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 RIPOR1Q6ZS17 1223 aa6.14□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 TRERF1Q96PN7 1200 aa6.14□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 CHMP4AQ9BY43 222 aa6.14□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 CCDC9Q9Y3X0 531 aaKnown RBP6.14□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 MEN1O00255 615 aa6.13□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 GTPBP3Q969Y2 492 aaKnown RBP6.13□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 ACDQ96AP0 544 aa6.13□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 SPOCK3Q9BQ16 436 aa6.13□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 KDM4CQ9H3R0 1056 aa6.13□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 NSFL1CQ9UNZ2 370 aaKnown RBP6.13□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 A0A1W2PRU2 124 aa6.12□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 ADAM23O75077 832 aa6.12□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 NEFLP07196 543 aa6.12□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 WDR44Q5JSH3 913 aa6.12□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 FAM117AQ9C073 453 aa6.12□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 GIGYF1O75420 1035 aaPredicted RBP6.11□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 MX2P20592 715 aa6.11□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 ERVK-9P63128 1117 aa6.11□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 POU4F2Q12837 409 aa6.11□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 SLC27A3Q5K4L6 730 aa6.11□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 RNF20Q5VTR2 975 aa6.11□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 CC2D2BQ6DHV5 1058 aa6.11□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 NLRP3Q96P20 1036 aa6.11□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 GAS2L1Q99501 681 aaPredicted RBP6.11□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 ZBBXA8MT70 800 aa6.1□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 ITGB2P05107 769 aa6.1□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 RFC5P40937 340 aa6.1□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 TAF7LQ5H9L4 462 aa6.1□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 GALNT6Q8NCL4 622 aa6.1□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 TRIM34Q9BYJ4 488 aa6.1□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 GRIP2Q9C0E4 1043 aa6.1□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 GPBP1L1Q9HC44 474 aaPredicted RBP6.1□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 PCDHB9Q9Y5E1 797 aa6.1□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 SPATA31C2B4DYI2 1134 aa6.09□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 OIP5O43482 229 aa6.09□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 PROCP04070 461 aa6.09□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 MAP2K3P46734 347 aa6.09□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 MCCD1P59942 119 aaPredicted RBP6.09□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 PDE4CQ08493 712 aa6.09□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 CLN3Q13286 438 aa6.09□□□□□ -1.43
CACNA1C-IT2-201ENST00000541871 NBPF10Q6P3W6 841 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms