RNA–Protein interactions for RNA: ENST00000540951.1

CADM1-210, Transcript of cell adhesion molecule 1, humanhuman

TSL 3

Gene CADM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-210ENST00000540951 TNS2Q63HR2 1409 aa25.8■■□□□ 1.72
CADM1-210ENST00000540951 SIPA1L3O60292 1781 aaPredicted RBP25.8■■□□□ 1.72
CADM1-210ENST00000540951 GJD4Q96KN9 370 aaPredicted RBP25.79■■□□□ 1.72
CADM1-210ENST00000540951 QTRT2Q9H974 415 aaKnown RBP25.79■■□□□ 1.72
CADM1-210ENST00000540951 SENP3-EIF4A1A0A087X0R7 540 aa25.78■■□□□ 1.72
CADM1-210ENST00000540951 BARGINQ6ZT62 677 aa25.78■■□□□ 1.72
CADM1-210ENST00000540951 CCDC9Q9Y3X0 531 aaKnown RBP25.78■■□□□ 1.72
CADM1-210ENST00000540951 ITGB4P16144 1822 aa25.77■■□□□ 1.72
CADM1-210ENST00000540951 SBF2Q86WG5 1849 aa25.77■■□□□ 1.72
CADM1-210ENST00000540951 IL2RBP14784 551 aa25.77■■□□□ 1.72
CADM1-210ENST00000540951 POTEAQ6S8J7 498 aa25.77■■□□□ 1.72
CADM1-210ENST00000540951 RUNDC1Q96C34 613 aa25.77■■□□□ 1.72
CADM1-210ENST00000540951 THRAP3Q9Y2W1 955 aaKnown RBP25.77■■□□□ 1.72
CADM1-210ENST00000540951 DOT1LQ8TEK3 1739 aa25.77■■□□□ 1.72
CADM1-210ENST00000540951 ZNF772Q68DY9 489 aaPredicted RBP25.76■■□□□ 1.71
CADM1-210ENST00000540951 FAM98CQ17RN3 349 aaKnown RBP25.75■■□□□ 1.71
CADM1-210ENST00000540951 TATP17735 454 aaPredicted RBP25.74■■□□□ 1.71
CADM1-210ENST00000540951 MTHFSDQ2M296 383 aaKnown RBP25.74■■□□□ 1.71
CADM1-210ENST00000540951 RAPGEF4Q8WZA2 1011 aa25.74■■□□□ 1.71
CADM1-210ENST00000540951 KAT6BQ8WYB5 2073 aa25.72■■□□□ 1.71
CADM1-210ENST00000540951 APAF1O14727 1248 aa25.72■■□□□ 1.71
CADM1-210ENST00000540951 RGS12O14924 1447 aa25.71■■□□□ 1.71
CADM1-210ENST00000540951 ONECUT3O60422 494 aaPredicted RBP25.71■■□□□ 1.71
CADM1-210ENST00000540951 CYP27B1O15528 508 aa25.7■■□□□ 1.7
CADM1-210ENST00000540951 RRP7AQ9Y3A4 280 aaKnown RBP25.7■■□□□ 1.7
CADM1-210ENST00000540951 KDM6AO15550 1401 aaPredicted RBP25.7■■□□□ 1.7
CADM1-210ENST00000540951 MAPK8IP3Q9UPT6 1336 aa25.69■■□□□ 1.7
CADM1-210ENST00000540951 TMPOP42166 694 aaKnown RBP25.69■■□□□ 1.7
CADM1-210ENST00000540951 NFE2L2Q16236 605 aa25.69■■□□□ 1.7
CADM1-210ENST00000540951 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.69■■□□□ 1.7
CADM1-210ENST00000540951 RBM6P78332 1123 aaKnown RBP25.67■■□□□ 1.7
CADM1-210ENST00000540951 PHF23Q9BUL5 403 aaPredicted RBP25.67■■□□□ 1.7
CADM1-210ENST00000540951 PLEKHO1Q53GL0 409 aaPredicted RBP25.66■■□□□ 1.7
CADM1-210ENST00000540951 ZNF530Q6P9A1 599 aaPredicted RBP25.66■■□□□ 1.7
CADM1-210ENST00000540951 ZCRB1Q8TBF4 217 aaKnown RBP25.66■■□□□ 1.7
CADM1-210ENST00000540951 CDCA7Q9BWT1 371 aaPredicted RBP25.66■■□□□ 1.7
CADM1-210ENST00000540951 PNNQ9H307 717 aaKnown RBP25.66■■□□□ 1.7
CADM1-210ENST00000540951 MAP3K5Q99683 1374 aa25.66■■□□□ 1.7
CADM1-210ENST00000540951 MRC1P22897 1456 aa25.66■■□□□ 1.7
CADM1-210ENST00000540951 TRIM35Q9UPQ4 493 aa25.65■■□□□ 1.7
CADM1-210ENST00000540951 KDM3BQ7LBC6 1761 aa25.64■■□□□ 1.7
CADM1-210ENST00000540951 AMOTQ4VCS5 1084 aa25.64■■□□□ 1.7
CADM1-210ENST00000540951 PCDH11XQ9BZA7 1347 aa25.63■■□□□ 1.69
CADM1-210ENST00000540951 PCDH11YQ9BZA8 1340 aa25.63■■□□□ 1.69
CADM1-210ENST00000540951 PAPPAQ13219 1627 aa25.63■■□□□ 1.69
CADM1-210ENST00000540951 PHKG2P15735 406 aa25.63■■□□□ 1.69
CADM1-210ENST00000540951 SEPT12Q8IYM1 358 aa25.63■■□□□ 1.69
CADM1-210ENST00000540951 GAS2L2Q8NHY3 880 aa25.63■■□□□ 1.69
CADM1-210ENST00000540951 NHSQ6T4R5 1651 aa25.63■■□□□ 1.69
CADM1-210ENST00000540951 MARCH10Q8NA82 808 aaPredicted RBP25.62■■□□□ 1.69
CADM1-210ENST00000540951 SPG7Q9UQ90 795 aa25.62■■□□□ 1.69
CADM1-210ENST00000540951 ZNF521Q96K83 1311 aa25.62■■□□□ 1.69
CADM1-210ENST00000540951 DDB1Q16531 1140 aa25.61■■□□□ 1.69
CADM1-210ENST00000540951 EP400Q96L91 3159 aa25.6■■□□□ 1.69
CADM1-210ENST00000540951 RIPK4P57078 832 aa25.6■■□□□ 1.69
CADM1-210ENST00000540951 NEUROD2Q15784 382 aa25.6■■□□□ 1.69
CADM1-210ENST00000540951 CEMIPQ8WUJ3 1361 aa25.59■■□□□ 1.69
CADM1-210ENST00000540951 RXRBP28702 533 aa25.59■■□□□ 1.69
CADM1-210ENST00000540951 HNRNPUQ00839 825 aaKnown RBP eCLIP25.59■■□□□ 1.69
CADM1-210ENST00000540951 DCTN1Q14203 1278 aa25.59■■□□□ 1.69
CADM1-210ENST00000540951 AKAP4Q5JQC9 854 aa25.59■■□□□ 1.69
CADM1-210ENST00000540951 BTAF1O14981 1849 aa25.58■■□□□ 1.69
CADM1-210ENST00000540951 EXOC5O00471 708 aa25.58■■□□□ 1.69
CADM1-210ENST00000540951 THUMPD2Q9BTF0 503 aaKnown RBP25.58■■□□□ 1.69
CADM1-210ENST00000540951 UBR2Q8IWV8 1755 aa25.58■■□□□ 1.69
CADM1-210ENST00000540951 NKX1-1Q15270 411 aaPredicted RBP25.57■■□□□ 1.68
CADM1-210ENST00000540951 IFNL2Q8IZJ0 200 aa25.57■■□□□ 1.68
CADM1-210ENST00000540951 IL17REQ8NFR9 667 aa25.57■■□□□ 1.68
CADM1-210ENST00000540951 DDX54Q8TDD1 881 aaKnown RBP25.57■■□□□ 1.68
CADM1-210ENST00000540951 SALL2Q9Y467 1007 aaPredicted RBP25.57■■□□□ 1.68
CADM1-210ENST00000540951 GNAT3A8MTJ3 354 aa25.56■■□□□ 1.68
CADM1-210ENST00000540951 NEFMP07197 916 aa25.56■■□□□ 1.68
CADM1-210ENST00000540951 NCBP3Q53F19 620 aaKnown RBP25.56■■□□□ 1.68
CADM1-210ENST00000540951 MCM10Q7L590 875 aa25.56■■□□□ 1.68
CADM1-210ENST00000540951 LGR6Q9HBX8 967 aa25.56■■□□□ 1.68
CADM1-210ENST00000540951 TNS1Q9HBL0 1735 aaKnown RBP25.55■■□□□ 1.68
CADM1-210ENST00000540951 A0A0G2JS52 829 aa25.55■■□□□ 1.68
CADM1-210ENST00000540951 MYT1Q01538 1121 aa25.55■■□□□ 1.68
CADM1-210ENST00000540951 CCDC27Q2M243 656 aa25.55■■□□□ 1.68
CADM1-210ENST00000540951 MPRIPQ6WCQ1 1025 aa25.55■■□□□ 1.68
CADM1-210ENST00000540951 WWC1Q8IX03 1113 aa25.54■■□□□ 1.68
CADM1-210ENST00000540951 YTHDC1Q96MU7 727 aaKnown RBP25.54■■□□□ 1.68
CADM1-210ENST00000540951 BCL9O00512 1426 aa25.54■■□□□ 1.68
CADM1-210ENST00000540951 RNMTO43148 476 aaKnown RBP25.53■■□□□ 1.68
CADM1-210ENST00000540951 C1orf141Q5JVX7 400 aa25.53■■□□□ 1.68
CADM1-210ENST00000540951 FAM182BQ5T319 152 aa25.53■■□□□ 1.68
CADM1-210ENST00000540951 ZBED9Q6R2W3 1325 aa25.52■■□□□ 1.68
CADM1-210ENST00000540951 HTATSF1O43719 755 aaKnown RBP25.51■■□□□ 1.67
CADM1-210ENST00000540951 DCAF5Q96JK2 942 aa25.49■■□□□ 1.67
CADM1-210ENST00000540951 SPINK5Q9NQ38 1064 aaPredicted RBP25.49■■□□□ 1.67
CADM1-210ENST00000540951 C5P01031 1676 aa25.48■■□□□ 1.67
CADM1-210ENST00000540951 NGEFQ8N5V2 710 aa25.48■■□□□ 1.67
CADM1-210ENST00000540951 LMOD3Q0VAK6 560 aa25.47■■□□□ 1.67
CADM1-210ENST00000540951 KRT27Q7Z3Y8 459 aa25.47■■□□□ 1.67
CADM1-210ENST00000540951 LY75O60449 1722 aa25.46■■□□□ 1.67
CADM1-210ENST00000540951 PDE3BQ13370 1112 aa25.46■■□□□ 1.67
CADM1-210ENST00000540951 HSP90AB1P08238 724 aaKnown RBP25.45■■□□□ 1.66
CADM1-210ENST00000540951 PTF1AQ7RTS3 328 aa25.44■■□□□ 1.66
CADM1-210ENST00000540951 KCPQ6ZWJ8 1503 aa25.43■■□□□ 1.66
CADM1-210ENST00000540951 ZNF853P0CG23 659 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms