RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ZBTB22O15209 634 aa9.52□□□□□ -0.89
LPCAT3-209ENST00000540060 POTEJP0CG39 1038 aa9.52□□□□□ -0.89
LPCAT3-209ENST00000540060 RXRBP28702 533 aa9.52□□□□□ -0.89
LPCAT3-209ENST00000540060 TNNT2P45379 298 aaPredicted RBP9.52□□□□□ -0.89
LPCAT3-209ENST00000540060 CC2D1BQ5T0F9 858 aaKnown RBP9.52□□□□□ -0.89
LPCAT3-209ENST00000540060 LARP1Q6PKG0 1096 aaKnown RBP9.52□□□□□ -0.89
LPCAT3-209ENST00000540060 PKD1L3Q7Z443 1732 aa9.52□□□□□ -0.89
LPCAT3-209ENST00000540060 MORC1Q86VD1 984 aa9.52□□□□□ -0.89
LPCAT3-209ENST00000540060 COL3A1P02461 1466 aaPredicted RBP9.52□□□□□ -0.89
LPCAT3-209ENST00000540060 PARD3Q8TEW0 1356 aa9.51□□□□□ -0.89
LPCAT3-209ENST00000540060 DISP2A7MBM2 1401 aa9.51□□□□□ -0.89
LPCAT3-209ENST00000540060 NCAPD2Q15021 1401 aa9.51□□□□□ -0.89
LPCAT3-209ENST00000540060 AMPHP49418 695 aa9.51□□□□□ -0.89
LPCAT3-209ENST00000540060 DDX10Q13206 875 aaKnown RBP9.51□□□□□ -0.89
LPCAT3-209ENST00000540060 ANKRD24Q8TF21 1146 aa9.51□□□□□ -0.89
LPCAT3-209ENST00000540060 POLKQ9UBT6 870 aa9.51□□□□□ -0.89
LPCAT3-209ENST00000540060 CCDC9Q9Y3X0 531 aaKnown RBP9.51□□□□□ -0.89
LPCAT3-209ENST00000540060 SPDYE2BA6NHP3 402 aa9.5□□□□□ -0.89
LPCAT3-209ENST00000540060 SPDYE6P0CI01 402 aa9.5□□□□□ -0.89
LPCAT3-209ENST00000540060 EVA1CP58658 441 aa9.5□□□□□ -0.89
LPCAT3-209ENST00000540060 SPDYE2Q495Y8 402 aa9.5□□□□□ -0.89
LPCAT3-209ENST00000540060 ZNF579Q8NAF0 562 aaKnown RBP9.5□□□□□ -0.89
LPCAT3-209ENST00000540060 SBF2Q86WG5 1849 aa9.49□□□□□ -0.89
LPCAT3-209ENST00000540060 ONECUT3O60422 494 aaPredicted RBP9.49□□□□□ -0.89
LPCAT3-209ENST00000540060 HSP90AB2PQ58FF8 381 aa9.49□□□□□ -0.89
LPCAT3-209ENST00000540060 TOM1L2Q6ZVM7 507 aa9.49□□□□□ -0.89
LPCAT3-209ENST00000540060 THRAP3Q9Y2W1 955 aaKnown RBP9.49□□□□□ -0.89
LPCAT3-209ENST00000540060 TNS1Q9HBL0 1735 aaKnown RBP9.48□□□□□ -0.89
LPCAT3-209ENST00000540060 MEGF6O75095 1541 aa9.48□□□□□ -0.89
LPCAT3-209ENST00000540060 CSB-PGBD3P0DP91 1061 aa9.48□□□□□ -0.89
LPCAT3-209ENST00000540060 FAM98CQ17RN3 349 aaKnown RBP9.48□□□□□ -0.89
LPCAT3-209ENST00000540060 BARGINQ6ZT62 677 aa9.48□□□□□ -0.89
LPCAT3-209ENST00000540060 TCP11L2Q8N4U5 519 aa9.48□□□□□ -0.89
LPCAT3-209ENST00000540060 CARD10Q9BWT7 1032 aa9.48□□□□□ -0.89
LPCAT3-209ENST00000540060 USP35Q9P2H5 1018 aa9.48□□□□□ -0.89
LPCAT3-209ENST00000540060 TNS2Q63HR2 1409 aa9.48□□□□□ -0.89
LPCAT3-209ENST00000540060 VIRMAQ69YN4 1812 aaKnown RBP9.47□□□□□ -0.89
LPCAT3-209ENST00000540060 PPM1GO15355 546 aaPredicted RBP9.47□□□□□ -0.89
LPCAT3-209ENST00000540060 CNGB1Q14028 1251 aaPredicted RBP9.47□□□□□ -0.89
LPCAT3-209ENST00000540060 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
LPCAT3-209ENST00000540060 DOT1LQ8TEK3 1739 aa9.47□□□□□ -0.89
LPCAT3-209ENST00000540060 GALR2O43603 387 aaPredicted RBP9.46□□□□□ -0.9
LPCAT3-209ENST00000540060 SEPT12Q8IYM1 358 aa9.46□□□□□ -0.9
LPCAT3-209ENST00000540060 NLRP2Q9NX02 1062 aa9.46□□□□□ -0.9
LPCAT3-209ENST00000540060 OVOS2A0A0G2JMS6 1433 aa9.46□□□□□ -0.9
LPCAT3-209ENST00000540060 NHSQ6T4R5 1651 aa9.45□□□□□ -0.9
LPCAT3-209ENST00000540060 PPP2R1AP30153 589 aa9.45□□□□□ -0.9
LPCAT3-209ENST00000540060 MTHFSP49914 203 aa9.45□□□□□ -0.9
LPCAT3-209ENST00000540060 EIF4A2Q14240 407 aaKnown RBP9.45□□□□□ -0.9
LPCAT3-209ENST00000540060 NBPF6Q5VWK0 638 aa9.45□□□□□ -0.9
LPCAT3-209ENST00000540060 NBPF4Q96M43 638 aa9.45□□□□□ -0.9
LPCAT3-209ENST00000540060 IGSF1Q8N6C5 1336 aa9.45□□□□□ -0.9
LPCAT3-209ENST00000540060 TOGARAM1Q9Y4F4 1720 aa9.45□□□□□ -0.9
LPCAT3-209ENST00000540060 A0A0G2JS52 829 aa9.44□□□□□ -0.9
LPCAT3-209ENST00000540060 MYT1Q01538 1121 aa9.44□□□□□ -0.9
LPCAT3-209ENST00000540060 PLEKHG2Q9H7P9 1386 aa9.44□□□□□ -0.9
LPCAT3-209ENST00000540060 RGPD3A6NKT7 1758 aaPredicted RBP9.43□□□□□ -0.9
LPCAT3-209ENST00000540060 RGPD4Q7Z3J3 1758 aa9.43□□□□□ -0.9
LPCAT3-209ENST00000540060 KDRP35968 1356 aa9.43□□□□□ -0.9
LPCAT3-209ENST00000540060 IL2RBP14784 551 aa9.43□□□□□ -0.9
LPCAT3-209ENST00000540060 RALBP1Q15311 655 aa9.43□□□□□ -0.9
LPCAT3-209ENST00000540060 USHBP1Q8N6Y0 703 aa9.43□□□□□ -0.9
LPCAT3-209ENST00000540060 EYA1Q99502 592 aa9.43□□□□□ -0.9
LPCAT3-209ENST00000540060 CDCA7Q9BWT1 371 aaPredicted RBP9.43□□□□□ -0.9
LPCAT3-209ENST00000540060 ITGB4P16144 1822 aa9.42□□□□□ -0.9
LPCAT3-209ENST00000540060 MYBBP1AQ9BQG0 1328 aaKnown RBP9.42□□□□□ -0.9
LPCAT3-209ENST00000540060 MYCNP04198 464 aaPredicted RBP9.42□□□□□ -0.9
LPCAT3-209ENST00000540060 IL13P35225 146 aa9.42□□□□□ -0.9
LPCAT3-209ENST00000540060 KRT27Q7Z3Y8 459 aa9.42□□□□□ -0.9
LPCAT3-209ENST00000540060 PRKRIP1Q9H875 184 aaPredicted RBP9.42□□□□□ -0.9
LPCAT3-209ENST00000540060 BTAF1O14981 1849 aa9.41□□□□□ -0.9
LPCAT3-209ENST00000540060 DDB1Q16531 1140 aa9.41□□□□□ -0.9
LPCAT3-209ENST00000540060 PELP1Q8IZL8 1130 aaKnown RBP9.41□□□□□ -0.9
LPCAT3-209ENST00000540060 SCN11AQ9UI33 1791 aa9.41□□□□□ -0.9
LPCAT3-209ENST00000540060 ADAMTS7Q9UKP4 1686 aa9.41□□□□□ -0.9
LPCAT3-209ENST00000540060 DLG5Q8TDM6 1919 aa9.41□□□□□ -0.9
LPCAT3-209ENST00000540060 BCL9O00512 1426 aa9.4□□□□□ -0.9
LPCAT3-209ENST00000540060 RREB1Q92766 1687 aa9.4□□□□□ -0.9
LPCAT3-209ENST00000540060 DIAPH1O60610 1272 aaKnown RBP9.4□□□□□ -0.9
LPCAT3-209ENST00000540060 CFAP53Q96M91 514 aa9.4□□□□□ -0.9
LPCAT3-209ENST00000540060 SCUBE2Q9NQ36 999 aa9.4□□□□□ -0.9
LPCAT3-209ENST00000540060 FARP1Q9Y4F1 1045 aaPredicted RBP9.4□□□□□ -0.9
LPCAT3-209ENST00000540060 PDE3BQ13370 1112 aa9.39□□□□□ -0.91
LPCAT3-209ENST00000540060 FAM182BQ5T319 152 aa9.39□□□□□ -0.91
LPCAT3-209ENST00000540060 AEBP1Q8IUX7 1158 aa9.39□□□□□ -0.91
LPCAT3-209ENST00000540060 RAPGEF4Q8WZA2 1011 aa9.39□□□□□ -0.91
LPCAT3-209ENST00000540060 EXOC5O00471 708 aa9.38□□□□□ -0.91
LPCAT3-209ENST00000540060 TATP17735 454 aaPredicted RBP9.38□□□□□ -0.91
LPCAT3-209ENST00000540060 MARCH10Q8NA82 808 aaPredicted RBP9.38□□□□□ -0.91
LPCAT3-209ENST00000540060 SIPA1L3O60292 1781 aaPredicted RBP9.37□□□□□ -0.91
LPCAT3-209ENST00000540060 PCDH11XQ9BZA7 1347 aa9.37□□□□□ -0.91
LPCAT3-209ENST00000540060 PCDH11YQ9BZA8 1340 aa9.37□□□□□ -0.91
LPCAT3-209ENST00000540060 LY75O60449 1722 aa9.37□□□□□ -0.91
LPCAT3-209ENST00000540060 NUP188Q5SRE5 1749 aa9.37□□□□□ -0.91
LPCAT3-209ENST00000540060 SULT6B1Q6IMI4 303 aa9.37□□□□□ -0.91
LPCAT3-209ENST00000540060 ZCRB1Q8TBF4 217 aaKnown RBP9.37□□□□□ -0.91
LPCAT3-209ENST00000540060 METRNQ9UJH8 293 aa9.37□□□□□ -0.91
LPCAT3-209ENST00000540060 PAPPAQ13219 1627 aa9.36□□□□□ -0.91
LPCAT3-209ENST00000540060 HMOX1P09601 288 aa9.36□□□□□ -0.91
LPCAT3-209ENST00000540060 UPF1Q92900 1129 aaKnown RBP eCLIP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms